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dft_tools/python/symmetry.py

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################################################################################
#
# TRIQS: a Toolbox for Research in Interacting Quantum Systems
#
# Copyright (C) 2011 by M. Aichhorn, L. Pourovskii, V. Vildosola
#
# TRIQS is free software: you can redistribute it and/or modify it under the
# terms of the GNU General Public License as published by the Free Software
# Foundation, either version 3 of the License, or (at your option) any later
# version.
#
# TRIQS is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# TRIQS. If not, see <http://www.gnu.org/licenses/>.
#
################################################################################
import copy,numpy
from types import *
from pytriqs.gf.local import *
from pytriqs.archive import *
import pytriqs.utility.mpi as mpi
class Symmetry:
"""This class provides the routines for applying symmetry operations for the k sums.
It contains the permutations of the atoms in the unti cell, and the corresponding
rotational matrices for each symmetry operation."""
def __init__(self, hdf_file, subgroup = None):
"""Initialises the class.
Reads the permutations and rotation matrizes from the file, and constructs the mapping for
the given orbitals. For each orbit a matrix is read!!!
SO: Flag for spin-orbit coupling.
SP: Flag for spin polarisation.
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"""
assert type(hdf_file) == StringType, "Symmetry: hdf_file must be a filename."
self.hdf_file = hdf_file
things_to_read = ['n_symm','n_atoms','perm','orbits','SO','SP','time_inv','mat','mat_tinv']
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for it in things_to_read: setattr(self,it,0)
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if mpi.is_master_node():
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#Read the stuff on master:
ar = HDFArchive(hdf_file,'a')
if subgroup is None:
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ar2 = ar
else:
ar2 = ar[subgroup]
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for it in things_to_read: setattr(self,it,ar2[it])
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del ar2
del ar
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# Broadcasting
for it in things_to_read: setattr(self,it,mpi.bcast(getattr(self,it)))
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# now define the mapping of orbitals:
# self.orb_map[iorb] = jorb gives the permutation of the orbitals as given in the list, when the
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# permutation of the atoms is done:
self.n_orbits = len(self.orbits)
self.orb_map = [ [0 for iorb in range(self.n_orbits)] for i_symm in range(self.n_symm) ]
for i_symm in range(self.n_symm):
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for iorb in range(self.n_orbits):
srch = copy.deepcopy(self.orbits[iorb])
srch['atom'] = self.perm[i_symm][self.orbits[iorb]['atom']-1]
self.orb_map[i_symm][iorb] = self.orbits.index(srch)
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def symmetrize(self,obj):
assert isinstance(obj,list), "symmetrize: obj has to be a list of objects."
assert len(obj) == self.n_orbits, "symmetrize: obj has to be a list of the same length as defined in the init."
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if isinstance(obj[0],BlockGf):
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symm_obj = [ obj[i].copy() for i in range(len(obj)) ] # here the result is stored, it is a BlockGf!
for iorb in range(self.n_orbits): symm_obj[iorb].zero() # set to zero
else:
# if not a BlockGf, we assume it is a matrix (density matrix), has to be complex since self.mat is complex!
symm_obj = [ copy.deepcopy(obj[i]) for i in range(len(obj)) ]
for iorb in range(self.n_orbits):
if type(symm_obj[iorb]) == DictType:
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for ii in symm_obj[iorb]: symm_obj[iorb][ii] *= 0.0
else:
symm_obj[iorb] *= 0.0
for i_symm in range(self.n_symm):
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for iorb in range(self.n_orbits):
l = self.orbits[iorb]['l'] # s, p, d, or f
dim = self.orbits[iorb]['dim']
jorb = self.orb_map[i_symm][iorb]
if isinstance(obj[0],BlockGf):
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tmp = obj[iorb].copy()
if self.time_inv[i_symm]: tmp << tmp.transpose()
for bname,gf in tmp: tmp[bname].from_L_G_R(self.mat[i_symm][iorb],tmp[bname],self.mat[i_symm][iorb].conjugate().transpose())
tmp *= 1.0/self.n_symm
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symm_obj[jorb] += tmp
else:
if type(obj[iorb]) == DictType:
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for ii in obj[iorb]:
if self.time_inv[i_symm] == 0:
symm_obj[jorb][ii] += numpy.dot(numpy.dot(self.mat[i_symm][iorb],obj[iorb][ii]),
self.mat[i_symm][iorb].conjugate().transpose()) / self.n_symm
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else:
symm_obj[jorb][ii] += numpy.dot(numpy.dot(self.mat[i_symm][iorb],obj[iorb][ii].conjugate()),
self.mat[i_symm][iorb].conjugate().transpose()) / self.n_symm
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else:
if self.time_inv[i_symm] == 0:
symm_obj[jorb] += numpy.dot(numpy.dot(self.mat[i_symm][iorb],obj[iorb]),
self.mat[i_symm][iorb].conjugate().transpose()) / self.n_symm
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else:
symm_obj[jorb] += numpy.dot(numpy.dot(self.mat[i_symm][iorb],obj[iorb].conjugate()),
self.mat[i_symm][iorb].conjugate().transpose()) / self.n_symm
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# Markus: This does not what it is supposed to do, check how this should work (keep for now)
# if (self.SO == 0) and (self.SP == 0):
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# # add time inv:
#mpi.report("Add time inversion")
# for iorb in range(self.n_orbits):
# if (isinstance(symm_obj[0],BlockGf)):
# tmp = symm_obj[iorb].copy()
# tmp << tmp.transpose()
# for bname,gf in tmp: tmp[bname].from_L_G_R(self.mat_tinv[iorb],tmp[bname],self.mat_tinv[iorb].transpose().conjugate())
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# symm_obj[iorb] += tmp
# symm_obj[iorb] /= 2.0
#
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# else:
# if type(symm_obj[iorb]) == DictType:
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# for ii in symm_obj[iorb]:
# symm_obj[iorb][ii] += numpy.dot(numpy.dot(self.mat_tinv[iorb],symm_obj[iorb][ii].conjugate()),
# self.mat_tinv[iorb].transpose().conjugate())
# symm_obj[iorb][ii] /= 2.0
# else:
# symm_obj[iorb] += numpy.dot(numpy.dot(self.mat_tinv[iorb],symm_obj[iorb].conjugate()),
# self.mat_tinv[iorb].transpose().conjugate())
# symm_obj[iorb] /= 2.0
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return symm_obj