308 lines
10 KiB
TeX
308 lines
10 KiB
TeX
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% ----------------------------------------------------------------------
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% LATEX TEMPLATE FOR PhD THESIS
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% ----------------------------------------------------------------------
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% based on Harish Bhanderi's PhD/MPhil template, then Uni Cambridge
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% http://www-h.eng.cam.ac.uk/help/tpl/textprocessing/ThesisStyle/
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% corrected and extended in 2007 by Jakob Suckale, then MPI-CBG PhD programme
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% and made available through OpenWetWare.org - the free biology wiki
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%: Style file for Latex
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% Most style definitions are in the external file PhDthesisPSnPDF.
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% In this template package, it can be found in ./Latex/Classes/
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\documentclass[twoside,11pt]{Latex/Classes/PhDthesisPSnPDF}
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\usepackage[tbtags]{amsmath}
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%\usepackage{adjustbox}
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%\usepackage{lipsum}
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\usepackage{multirow}
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\usepackage{array}
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\usepackage{tabularx}
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\usepackage[table, usenames, dvipsnames]{xcolor}
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\newcolumntype{C}[1]{>{\centering\let\newline\\\arraybackslash\hspace{0pt}}m{#1}}
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\usepackage[normalem]{ulem}
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\usepackage{mathptmx}
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\usepackage[11pt]{moresize}
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\usepackage{url}
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\newcommand{\red}[1]{{\color{red}#1}}
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\newcommand{\blue}[1]{{\color{blue}#1}}
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%\textcolor{red}{text}
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%\usepackage[utf8]{inputenc}
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%\usepackage{cleveref}
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%\crefname{equation}{equation}{equations}
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%\crefname{figure}{figure}{figures}
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%\crefname{section}{section}{sections}
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%: Macro file for Latex
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% Macros help you summarise frequently repeated Latex commands.
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% Here, they are placed in an external file /Latex/Macros/MacroFile1.tex
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% An macro that you may use frequently is the figuremacro (see introduction.tex)
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\include{Latex/Macros/MacroFile1}
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%: ----------------------------------------------------------------------
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%: TITLE PAGE: name, degree,..
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% ----------------------------------------------------------------------
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% below is to generate the title page with crest and author name
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%if output to PDF then put the following in PDF header
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\ifpdf
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\pdfinfo { /Title (PhD and MPhil Thesis Classes)
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/Creator (TeX)
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/Producer (pdfTeX)
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/Author (YourName your@email.net)
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/CreationDate (D:YYYYMMDDhhmmss) %format D:YYYYMMDDhhmmss
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/ModDate (D:YYYYMMDDhhmm)
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/Subject (xyz)
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/Keywords (add, your, keywords, here) }
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\pdfcatalog { /PageMode (/UseOutlines)
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/OpenAction (fitbh) }
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\fi
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\title{Structure, Solvation, Thermodynamic and Fragmentation of Molecular Clusters}
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% ----------------------------------------------------------------------
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% The section below defines www links/email for author and institutions
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% They will appear on the title page of the PDF and can be clicked
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\ifpdf
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\author{\href{mailto:your@email.net}{Linjie Zheng \break
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\break
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Supervised by\break
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J\'{e}r\^ome Cuny \& Mathias Rapacioli
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\break
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\break
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}}
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%\cityofbirth{}
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% uncomment this if your university requires this
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% % If city of birth is required, also uncomment 2 sections in PhDthesisPSnPDF
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% % Just search for the "city" and you'll find them.
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%\collegeordept{\href{http://www.something.net}{Facult\'e des Sciences et d'Ing\'enierie}}
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\collegeordept{\href{http://www.something.net}{Laboratoire de Chimie et Physique Quantiques}}
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\university{\href{http://www.something.net}{Universit\'{e} de Toulouse 3 Paul Sabatier}}
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\crest{\includegraphics[width=4cm]{upc-logo}}
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% The crest is a graphics file of the logo of your research institution.
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% Place it in ./0_frontmatter/figures and specify the width
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%%\crest{\includegraphics[width=4cm]{logo}}
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% If you are not creating a PDF then use the following. The default is PDF.
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\else
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\author{YourName}
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% \cityofbirth{born in XYZ}
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\collegeordept{CollegeOrDept}
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\university{University}
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%%% \crest{\includegraphics[width=4cm]{logo}}
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\fi
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%\renewcommand{\submittedtext}{change the default text here if neededxxx}
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\degree{PhD}
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\degreedate{month 2021}
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%xs ----------------------------------------------------------------------
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% turn of those nasty overfull and underfull hboxes
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\hbadness=10000
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\hfuzz=50pt
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% make blank pages really blank
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\usepackage{emptypage}
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%: --------------------------------------------------------------
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%: FRONT MATTER: dedications, abstract,..
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% --------------------------------------------------------------
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\DeclareUnicodeCharacter{2009}{FIXME}
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\usepackage{textcomp} %Celsius
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\usepackage{graphicx}
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%\usepackage{hyperref}
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\begin{document}
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\setcitestyle{square}
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%\language{english}
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% sets line spacing
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\renewcommand\baselinestretch{1.2}
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%\renewcommand{\topfraction}{.75}
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\renewcommand{\floatpagefraction}{.8}
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%\newcommand{\boldm}[1] {\mathversion{bold}#1\mathversion{normal}}
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\baselineskip=18pt plus1pt
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%: ----------------------- generate cover page ------------------------
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\maketitle % command to print the title page with above variables
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%: ----------------------- cover page back side ------------------------
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% Your research institution may require reviewer names, etc.
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% This cover back side is required by Med Fac; uncomment if needed.
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\newpage
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\vspace{10mm}
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1. Reviewer: Name
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\vspace{10mm}
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2. Reviewer:
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\vspace{20mm}
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Day of the defense:
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\vspace{20mm}
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\hspace{70mm}Signature from head of PhD committee:
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%: ----------------------- abstract ------------------------
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\emph{•}
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% Your institution may have specific regulations if you need an abstract and where it is to be placed in the document. The default here is just after title.
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%\include{0_frontmatter/abstract}
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% The original template provides and abstractseparate environment, if your institution requires them to be separate. I think it's easier to print the abstract from the complete thesis by restricting printing to the relevant page.
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%\begin{abstractseparate}
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% \input{Abstract/abstract}
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%\end{abstractseparate}
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%: ----------------------- tie in front matter ------------------------
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\frontmatter
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\include{0_frontmatter/abstract}
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\include{0_frontmatter/dedication}
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\include{0_frontmatter/acknowledgement}
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%\include{0_frontmatter/glossary}
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%: ----------------------- contents ------------------------
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\setcounter{secnumdepth}{3} % organisational level that receives a numbers
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\setcounter{tocdepth}{3} % print table of contents for level 3
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\tableofcontents % print the table of contents
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% levels are: 0 - chapter, 1 - section, 2 - subsection, 3 - subsection
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%: ----------------------- list of figures/tables ------------------------
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%%\listoffigures % print list of figures
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%%\listoftables % print list of tables
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%: ----------------------- glossary ------------------------
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% Tie in external source file for definitions: /0_frontmatter/glossary.tex
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% Glossary entries can also be defined in the main text. See glossary.tex
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\include{0_frontmatter/glossary}
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%\begin{multicols}{1} % \begin{multicols}{#columns}[header text][space]
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%%\begin{footnotesize} % scriptsize(7) < footnotesize(8) < small (9) < normal (10)
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\begin{small}
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\printnomenclature[1.3cm] % [] = distance between entry and description
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%\label{nom} % target name for links to glossary
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\end{small}
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%\end{footnotesize}
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%\end{multicols}
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%: --------------------------------------------------------------
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%: MAIN DOCUMENT SECTION
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% --------------------------------------------------------------
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% the main text starts here with the introduction, 1st chapter,...
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\mainmatter
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\renewcommand{\chaptername}{} % uncomment to print only "1" not "Chapter 1"
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%: ----------------------- subdocuments ------------------------
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% Parts of the thesis are included below. Rename the files as required.
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% But take care that the paths match. You can also change the order of appearance by moving the include commands.
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\include{1_GeneIntro/GeneIntro}
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\include{2_Introduction/introduction} % background information
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\include{3/structure_stability}
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\include{4/collision}
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\include{5/general_conclusion}
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%%\include{5/XYZ}
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%%\include{6/XYZ}
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%%\include{7/discussion} % discussion of results
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%%\include{8/materials_methods} % description of lab methods
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% --------------------------------------------------------------
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%: BACK MATTER: appendices, refs,..
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% --------------------------------------------------------------
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% the back matter: appendix and references close the thesis
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%: ----------------------- bibliography ------------------------
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% The section below defines how references are listed and formatted
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% The default below is 2 columns, small font, complete author names.
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% Entries are also linked back to the page number in the text and to external URL if provided in the BibTex file.
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% PhDbiblio-url2 = names small caps, title bold & hyperlinked, link to page
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\begin{multicols}{2} % \begin{multicols}{ # columns}[ header text][ space]
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\begin{tiny} % tiny(5) < scriptsize(7) < footnotesize(8) < small (9)
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\bibliographystyle{Latex/Classes/PhDbiblio-url2} % Title is link if provided
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\renewcommand{\bibname}{References} % changes the header; default: Bibliography
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\bibliography{6_backmatter/references} % adjust this to fit your BibTex file
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\end{tiny}
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\end{multicols}
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% --------------------------------------------------------------
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% Various bibliography styles exit. Replace above style as desired.
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% in-text refs: (1) (1; 2)
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% ref list: alphabetical; author(s) in small caps; initials last name; page(s)
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%\bibliographystyle{Latex/Classes/PhDbiblio-case} % title forced lower case
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%\bibliographystyle{Latex/Classes/PhDbiblio-bold} % title as in bibtex but bold
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%\bibliographystyle{Latex/Classes/PhDbiblio-url} % bold + www link if provided
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%\bibliographystyle{Latex/Classes/jmb} % calls style file jmb.bst
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% in-text refs: author (year) without brackets
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% ref list: alphabetical; author(s) in normal font; last name, initials; page(s)
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%\bibliographystyle{plainnat} % calls style file plainnat.bst
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% in-text refs: author (year) without brackets
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% (this works with package natbib)
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% --------------------------------------------------------------
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% according to Dresden med fac summary has to be at the end
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%\include{0_frontmatter/abstract}
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%: Declaration of originality
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/%\include{6_backmatter/acronyms}
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\include{6_backmatter/declaration}
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\end{document}
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