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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-12-23 04:43:57 +01:00
Commit Graph

285 Commits

Author SHA1 Message Date
11a17c65d3 add attr_ prefix to the template file name for numerical attributes 2021-09-21 10:41:37 +02:00
c22e9d2925 put back sanity check that dimensioning variables are positive 2021-09-20 17:00:05 +02:00
ce0d98b984 add conversion of float-like attributes into an output tuple 2021-09-20 15:52:55 +02:00
4b9827048f adapt the templates in back ends 2021-09-20 15:51:36 +02:00
261e7c8b84 modify front end for more general numerical attributes 2021-09-20 13:16:44 +02:00
11dadaab36 add tutorial HTML page to the main documentation 2021-09-15 13:43:57 +02:00
f251f0afba remove unnecessary comments in the SWIG interface 2021-09-14 17:30:05 +02:00
d04106f72d max_str_len should be int32_t to properly check for negative values 2021-09-13 13:35:45 +02:00
1589995775 do not use warnings for an attempt to overwrite in the Python API 2021-09-13 11:46:31 +02:00
2bd4ef9bfd add has_ functions to the Python API 2021-09-13 11:29:00 +02:00
77e3f1ac11 print UserWarning instead of raising Error for an attempt to overwrite data
following suggestion of Vijay G.C.
2021-09-12 14:24:50 +02:00
d060808467 do not reveal paths to trexio (security concerns) 2021-09-12 13:36:24 +02:00
12dd1fd8dc apply some suggestions from cppcheck 2021-09-12 13:25:03 +02:00
40d5fc31fc check that the data object exists before reading it from the file 2021-09-10 09:38:26 +02:00
67e59f156c explicitly provide __version__ attribute of the trexio module 2021-09-08 19:28:18 +02:00
96678fea2e adapt write functions to receive multidimensional arrays or lists 2021-09-07 17:14:23 +02:00
3e82fd9ae8 FIX: a bug that was leading to Python and valgrind errors 2021-08-31 12:11:22 +03:00
74c69bb293 better Exception handling with custom exception class 2021-08-30 18:04:35 +03:00
5a2b4d96a7 reshape output arrays by default when reading from the file 2021-08-27 16:08:39 +03:00
7b5ebf6272 implement TREXIO File class and change import of pytrexio module 2021-08-26 17:01:53 +03:00
4c28a4cac8 add type converters for numerical arrays in read/write Python functions 2021-08-26 13:14:46 +03:00
1dcd32ef7d add SWIG typemaps for safe API calls in single and double precision 2021-08-25 13:31:17 +03:00
ed7e3902e2 add memory-safe functions in single or double precision 2021-08-24 13:32:01 +03:00
2911e91941 make dim an optional argument in read_ functions
if dim is None - the function read all necessary dimensions from the TREXIO file
2021-08-24 12:51:43 +03:00
6f7c23aa11 add missing annotations 2021-08-21 13:13:55 +03:00
4fe86ee980 add Python docstrings for API functions
+ move definition of Fortran and Python back ends from Constant Prefixes to Back Ends section
2021-08-21 12:47:36 +03:00
5d5025ae1d get rid of _safe suffix and add dimension to read_dset_str functions 2021-08-20 13:43:15 +03:00
831973fc8e better python compilation 2021-08-18 16:28:43 +03:00
902147b45b better structure of the python directory 2021-08-18 15:40:42 +03:00
9cc552409f rename the front-end Python module 2021-08-18 13:30:03 +03:00
f0bccee32d single top-level import of pytrexio resolves bug with caching 2021-08-18 13:28:37 +03:00
0b223b9d6e return type cast of exit codes and back ends in C
add top-level string_of_error function in Python
2021-08-14 12:27:11 +03:00
721352cb89 add missing support for reading single string attributes 2021-08-11 16:01:36 +03:00
209f4506c8 update gitignore 2021-08-11 16:01:04 +03:00
2be1abd571 add Python front end 2021-08-11 15:59:58 +03:00
ec7a39f6c2 strict int types for DIM1 and arrays 2021-08-06 16:24:11 +03:00
808adc7cd8 add typemaps and tests for numpy int arrays
+ some cleaning in the Python test and SWIG interface files
2021-08-06 14:04:29 +03:00
1388ddef80 fix warnings produced during compilation of the Python extension module 2021-08-06 12:06:42 +03:00
d0c19e0ce0 pytrexio build and pip install working 2021-08-05 17:55:34 +03:00
60c28c1f3b rename python test and add temporary TODO 2021-08-04 14:13:23 +03:00
9a28b8d4bc Revert "create python directory and add TODO objectives"
This reverts commit 6ce91a6669.
2021-08-04 12:07:27 +03:00
6ce91a6669 create python directory and add TODO objectives 2021-08-04 10:18:36 +03:00
e0162d4570 return double datasets as numpy arrays using numpy.i and safe API 2021-07-28 15:59:29 +02:00
ea0ea0ac38 move from distutils to setuptools
sdist and install arguments of setup.py work!
2021-07-28 15:57:42 +02:00
f3dbfc7be2 added License and install_requires in setup.py + cleaning 2021-07-28 10:33:33 +02:00
da5a990acc add memory-safe API for numerical datasets 2021-07-28 10:19:00 +02:00
9f4176a8b6 resolve major compiler warnings produced by distutils 2021-07-27 11:06:06 +02:00
171cf1662b ignore __pycache__ 2021-07-26 19:28:56 +02:00
9bbae8fd7c replace some integers with TREXIO-native constants 2021-07-26 19:27:45 +02:00
1f98604d58 add pattern matching for arrays of strings + comments 2021-07-26 18:49:26 +02:00