mirror of
https://github.com/TREX-CoE/qmckl.git
synced 2024-06-30 00:44:52 +02:00
642 lines
14 KiB
Org Mode
642 lines
14 KiB
Org Mode
#+TITLE: Building tools
|
|
#+STARTUP: indent overview
|
|
#+PROPERTY: header-args: :comments both
|
|
|
|
This file contains all the tools needed to build the QMCkl library.
|
|
|
|
* Helper functions
|
|
#+NAME: header
|
|
#+begin_src sh :tangle no :exports none :output none
|
|
echo "This file was created by tools/Building.org"
|
|
#+end_src
|
|
|
|
#+NAME: check-src
|
|
#+begin_src bash
|
|
if [[ $(basename ${PWD}) != "src" ]] ; then
|
|
echo "This script needs to be run in the src directory"
|
|
exit -1
|
|
fi
|
|
#+end_src
|
|
|
|
#+NAME: url-issues
|
|
: https://github.com/trex-coe/qmckl/issues
|
|
|
|
#+NAME: url-web
|
|
: https://trex-coe.github.io/qmckl
|
|
|
|
#+NAME: license
|
|
#+begin_example
|
|
BSD 3-Clause License
|
|
|
|
Copyright (c) 2020, TREX Center of Excellence
|
|
All rights reserved.
|
|
|
|
Redistribution and use in source and binary forms, with or without
|
|
modification, are permitted provided that the following conditions are met:
|
|
|
|
1. Redistributions of source code must retain the above copyright notice, this
|
|
list of conditions and the following disclaimer.
|
|
|
|
2. Redistributions in binary form must reproduce the above copyright notice,
|
|
this list of conditions and the following disclaimer in the documentation
|
|
and/or other materials provided with the distribution.
|
|
|
|
3. Neither the name of the copyright holder nor the names of its
|
|
contributors may be used to endorse or promote products derived from
|
|
this software without specific prior written permission.
|
|
|
|
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
|
|
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
|
|
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
|
|
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
|
|
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
|
|
|
#+end_example
|
|
|
|
* Makefiles
|
|
** Makefile.in
|
|
:PROPERTIES:
|
|
:header-args: :tangle ../src/Makefile.in :noweb yes :comments org
|
|
:END:
|
|
|
|
This is the main Makefile invoked by the ~make~ command at the root
|
|
of the package. To compile the sources, it calls the =Makefile=
|
|
located in the =src= directory. This Makefile creates the source
|
|
file from the org-mode file, as well as a Makefile,
|
|
=Makefile.generated=, dedicated to the compilation of the sources.
|
|
|
|
*** Header
|
|
|
|
We want the Makefile to be POSIX-compliant, such that it works not
|
|
only with GNU Make.
|
|
|
|
#+begin_src makefile
|
|
# <<header()>>
|
|
|
|
.POSIX:
|
|
#+end_src
|
|
|
|
*** Compiler options
|
|
|
|
Compiler variables are obtained from the configure script (see =configure.ac=)
|
|
|
|
#+begin_src makefile
|
|
CC = @CC@
|
|
FC = @FC@
|
|
CFLAGS = @CFLAGS@
|
|
FCFLAGS = @FCFLAGS@
|
|
LDFLAGS = @LDFLAGS@
|
|
DEFS = @DEFS@
|
|
|
|
#+end_src
|
|
|
|
*** Variables
|
|
|
|
#+begin_src makefile
|
|
HAS_CPPCHECK = @HAS_CPPCHECK@
|
|
|
|
# VPATH-related substitution variables
|
|
srcdir = @srcdir@
|
|
VPATH = @srcdir@
|
|
|
|
top_srcdir=$(srcdir)/..
|
|
shared_lib=$(top_srcdir)/lib/libqmckl.so
|
|
static_lib=$(top_srcdir)/lib/libqmckl.a
|
|
qmckl_h=$(top_srcdir)/include/qmckl.h
|
|
qmckl_f=$(top_srcdir)/share/qmckl/fortran/qmckl_f.f90
|
|
|
|
export CC CFLAGS DEFS FC FCFLAGS LIBS top_srcdir
|
|
|
|
ORG_SOURCE_FILES=$(wildcard $(srcdir)/*.org)
|
|
C_SOURCE_FILES=$(patsubst %.org,%.c,$(ORG_SOURCE_FILES))
|
|
INCLUDE=-I$(top_srcdir)/include/
|
|
#+end_src
|
|
|
|
*** Rules
|
|
|
|
The source files are created during the generation of the file ~Makefile.generated~.
|
|
The Makefile.generated is the one that will be distributed with the library.
|
|
|
|
#+begin_src makefile
|
|
.PHONY: clean shared static doc all check install uninstall
|
|
.SECONDARY: # Needed to keep the produced C and Fortran files
|
|
|
|
$(shared_lib) $(static_lib): $(qmckl_h) $(qmckl_f) Makefile.generated
|
|
$(MAKE) -f Makefile.generated $@
|
|
|
|
install uninstall: Makefile.generated
|
|
$(MAKE) -f Makefile.generated $@
|
|
|
|
$(qmckl_f) $(qmckl_h): Makefile.generated
|
|
$(top_srcdir)/tools/build_qmckl_h.sh
|
|
|
|
shared: $(shared_lib)
|
|
static: $(static_lib)
|
|
all: shared static doc check
|
|
|
|
check: $(static_lib)
|
|
$(MAKE) -f Makefile.generated check
|
|
|
|
ifeq ($(HAS_CPPCHECK),1)
|
|
cppcheck:
|
|
cppcheck \
|
|
--addon=cert \
|
|
--enable=warning,style,performance,portability,information \
|
|
qmckl_*.c
|
|
endif
|
|
|
|
doc: $(ORG_SOURCE_FILES)
|
|
$(top_srcdir)/tools/build_doc.sh
|
|
|
|
clean:
|
|
- $(MAKE) -f Makefile.generated clean
|
|
- $(RM) test_qmckl_* test_qmckl.c \
|
|
$(qmckl_h) $(qmckl_f) \
|
|
qmckl_*.f90 qmckl_*.c qmckl_*.h \
|
|
Makefile.generated *.html *.txt
|
|
|
|
veryclean: clean FORCE
|
|
- $(RM) $(top_srcdir)/share/doc/qmckl/html/*.html \
|
|
$(top_srcdir)/share/doc/qmckl/text/*.txt
|
|
|
|
Makefile.generated.in: Makefile $(top_srcdir)/tools/create_makefile.sh $(ORG_SOURCE_FILES) $(top_srcdir)/tools/Building.org
|
|
$(top_srcdir)/tools/create_makefile.sh
|
|
|
|
Makefile.generated: Makefile.generated.in
|
|
cd .. ; ./config.status
|
|
|
|
.SUFFIXES: .org .c
|
|
|
|
.org.c:
|
|
$(top_srcdir)/tools/tangle.sh $<
|
|
|
|
#+end_src
|
|
|
|
** Script to generate auto-generated Makefile
|
|
:PROPERTIES:
|
|
:header-args: :tangle create_makefile.sh :noweb yes :shebang #!/bin/bash :comments org
|
|
:END:
|
|
|
|
This script generates the Makefile that compiles the library.
|
|
The ~OUTPUT~ variable contains the name of the generated Makefile,typically =Makefile.generated=.
|
|
|
|
#+begin_src bash
|
|
# <<header()>>
|
|
|
|
<<check_src>>
|
|
|
|
OUTPUT=Makefile.generated.in
|
|
#+end_src
|
|
|
|
We start by tangling all the org-mode files.
|
|
|
|
#+begin_src bash
|
|
${top_srcdir}/tools/tangle.sh *.org
|
|
${top_srcdir}/tools/build_qmckl_h.sh
|
|
#+end_src
|
|
|
|
Then we create the list of ~*.o~ files to be created, for library
|
|
functions:
|
|
|
|
#+begin_src bash
|
|
OBJECTS="qmckl_f.o"
|
|
for i in $(ls qmckl_*.c qmckl_*f.f90) ; do
|
|
FILE=${i%.*}
|
|
OBJECTS+=" ${FILE}.o"
|
|
done >> $OUTPUT
|
|
#+end_src
|
|
|
|
for tests in C:
|
|
|
|
#+begin_src bash
|
|
TESTS=""
|
|
for i in $(ls test_qmckl_*.c) ; do
|
|
FILE=${i%.c}
|
|
TESTS+=" ${FILE}.o"
|
|
done >> $OUTPUT
|
|
#+end_src
|
|
|
|
and for tests in Fortran:
|
|
|
|
#+begin_src bash
|
|
TESTS_F=""
|
|
for i in $(ls test_qmckl_*_f.f90) ; do
|
|
FILE=${i%.f90}
|
|
TESTS_F+=" ${FILE}.o"
|
|
done >> $OUTPUT
|
|
#+end_src
|
|
|
|
Finally, we append the variables to the Makefile
|
|
|
|
#+begin_src bash :noweb yes
|
|
cat << EOF > ${OUTPUT}
|
|
.POSIX:
|
|
.SUFFIXES:
|
|
|
|
package = @PACKAGE_TARNAME@
|
|
version = @PACKAGE_VERSION@
|
|
|
|
# VPATH-related substitution variables
|
|
srcdir = @srcdir@
|
|
VPATH = @srcdir@
|
|
|
|
prefix = @prefix@
|
|
|
|
CC = @CC@
|
|
DEFS = @DEFS@
|
|
CFLAGS = @CFLAGS@ -I\$(top_srcdir)/munit/ -I\$(top_srcdir)/include -I.
|
|
CPPFLAGS = @CPPFLAGS@
|
|
LIBS = @LIBS@
|
|
|
|
FC = @FC@
|
|
FCFLAGS= @FCFLAGS@
|
|
|
|
OBJECT_FILES=$OBJECTS
|
|
|
|
TESTS = $TESTS
|
|
TESTS_F = $TESTS_F
|
|
|
|
LIBS = @LIBS@
|
|
FCLIBS = @FCLIBS@
|
|
EOF
|
|
|
|
export
|
|
echo '
|
|
<<rules>>
|
|
' >> ${OUTPUT}
|
|
|
|
#+end_src
|
|
|
|
and the rules:
|
|
|
|
#+NAME: rules
|
|
#+begin_src makefile :tangle no
|
|
top_srcdir=$(srcdir)/..
|
|
shared_lib=$(top_srcdir)/lib/libqmckl.so
|
|
static_lib=$(top_srcdir)/lib/libqmckl.a
|
|
qmckl_h=$(top_srcdir)/include/qmckl.h
|
|
qmckl_f=$(top_srcdir)/share/qmckl/fortran/qmckl_f.f90
|
|
munit=$(top_srcdir)/munit/munit.c
|
|
|
|
datarootdir=$(prefix)/share
|
|
datadir=$(datarootdir)
|
|
docdir=$(datarootdir)/doc/$(package)
|
|
htmldir=$(docdir)/html
|
|
libdir=$(prefix)/lib
|
|
includedir=$(prefix)/include
|
|
fortrandir=$(datarootdir)/$(package)/fortran
|
|
|
|
|
|
shared: $(shared_lib)
|
|
static: $(static_lib)
|
|
|
|
|
|
all: shared static
|
|
|
|
$(shared_lib): $(OBJECT_FILES)
|
|
$(CC) -shared $(OBJECT_FILES) -o $(shared_lib)
|
|
|
|
$(static_lib): $(OBJECT_FILES)
|
|
$(AR) rcs $(static_lib) $(OBJECT_FILES)
|
|
|
|
|
|
# Test
|
|
|
|
qmckl_f.o: $(qmckl_f)
|
|
$(FC) $(FCFLAGS) -c $(qmckl_f) -o $@
|
|
|
|
test_qmckl: test_qmckl.c $(qmckl_h) $(static_lib) $(TESTS) $(TESTS_F)
|
|
$(CC) $(CFLAGS) $(CPPFLAGS) $(DEFS) $(munit) $(TESTS) $(TESTS_F) \
|
|
$(static_lib) $(LIBS) $(FCLIBS) test_qmckl.c -o $@
|
|
|
|
test_qmckl_shared: test_qmckl.c $(qmckl_h) $(shared_lib) $(TESTS) $(TESTS_F)
|
|
$(CC) $(CFLAGS) $(CPPFLAGS) $(DEFS) \
|
|
-Wl,-rpath,$(top_srcdir)/lib -L$(top_srcdir)/lib $(munit) $(TESTS) \
|
|
$(TESTS_F) -lqmckl $(LIBS) $(FCLIBS) test_qmckl.c -o $@
|
|
|
|
check: test_qmckl test_qmckl_shared
|
|
./test_qmckl
|
|
|
|
clean:
|
|
$(RM) -- *.o *.mod $(shared_lib) $(static_lib) test_qmckl
|
|
|
|
|
|
|
|
|
|
install:
|
|
install -d $(DESTDIR)$(prefix)/lib
|
|
install -d $(DESTDIR)$(prefix)/include
|
|
install -d $(DESTDIR)$(prefix)/share/qmckl/fortran
|
|
install -d $(DESTDIR)$(prefix)/share/doc/qmckl/html/
|
|
install -d $(DESTDIR)$(prefix)/share/doc/qmckl/text/
|
|
install $(shared_lib) $(DESTDIR)$(libdir)/
|
|
install $(static_lib) $(DESTDIR)$(libdir)/
|
|
install $(qmckl_h) $(DESTDIR)$(includedir)
|
|
install $(qmckl_f) $(DESTDIR)$(fortrandir)
|
|
install $(top_srcdir)/share/doc/qmckl/html/*.html $(DESTDIR)$(docdir)/html/
|
|
install $(top_srcdir)/share/doc/qmckl/html/*.css $(DESTDIR)$(docdir)/html/
|
|
install $(top_srcdir)/share/doc/qmckl/text/*.txt $(DESTDIR)$(docdir)/text/
|
|
|
|
uninstall:
|
|
rm $(DESTDIR)$(libdir)/libqmckl.so
|
|
rm $(DESTDIR)$(libdir)/libqmckl.a
|
|
rm $(DESTDIR)$(includedir)/qmckl.h
|
|
rm -rf $(DESTDIR)$(datarootdir)/$(package)
|
|
rm -rf $(DESTDIR)$(docdir)
|
|
|
|
.SUFFIXES: .c .f90 .o
|
|
|
|
.c.o:
|
|
$(CC) $(CFLAGS) $(CPPFLAGS) $(DEFS) -c $*.c -o $*.o
|
|
|
|
.f90.o: qmckl_f.o
|
|
$(FC) $(FCFLAGS) -c $*.f90 -o $*.o
|
|
|
|
.PHONY: check cppcheck clean all
|
|
#+end_src
|
|
|
|
* Script to tangle the org-mode files
|
|
:PROPERTIES:
|
|
:header-args: :tangle tangle.sh :noweb yes :shebang #!/bin/bash :comments org
|
|
:END:
|
|
|
|
#+begin_src bash
|
|
# <<header()>>
|
|
|
|
<<check_src>>
|
|
#+end_src
|
|
|
|
This file needs to be run from the QMCKL =src= directory.
|
|
|
|
It tangles all the files in the directory. It uses the =config_tangle.el= file, which contains information required to
|
|
compute the current file names using for example ~(eval c)~ to get
|
|
the name of the produced C file.
|
|
|
|
The file is not tangled if the last modification date of the org
|
|
file is less recent than one of the tangled files.
|
|
|
|
#+begin_src bash
|
|
function tangle()
|
|
{
|
|
local org_file=$1
|
|
local c_file=${org_file%.org}.c
|
|
local f_file=${org_file%.org}.f90
|
|
|
|
if [[ ${org_file} -ot ${c_file} ]] ; then
|
|
return
|
|
elif [[ ${org_file} -ot ${f_file} ]] ; then
|
|
return
|
|
fi
|
|
emacs --batch ${org_file} --load=${top_srcdir}/tools/config_tangle.el -f org-babel-tangle
|
|
}
|
|
|
|
for i in $@
|
|
do
|
|
echo "--- ${i} ----"
|
|
tangle ${i}
|
|
done
|
|
#+end_src
|
|
|
|
* Script to build the final qmckl.h file
|
|
:PROPERTIES:
|
|
:header-args:bash: :tangle build_qmckl_h.sh :noweb yes :shebang #!/bin/bash :comments org
|
|
:END:
|
|
|
|
#+begin_src bash :noweb yes
|
|
# <<header()>>
|
|
|
|
#+end_src
|
|
|
|
#+NAME: qmckl-header
|
|
#+begin_src text :noweb yes
|
|
------------------------------------------
|
|
QMCkl - Quantum Monte Carlo kernel library
|
|
------------------------------------------
|
|
|
|
Documentation : <<url-web()>>
|
|
Issues : <<url-issues()>>
|
|
|
|
<<license()>>
|
|
|
|
|
|
#+end_src
|
|
|
|
All the produced header files are concatenated in the =qmckl.h=
|
|
file, located in the include directory. The =*_private.h= files
|
|
are excluded.
|
|
|
|
Put =.h= files in the correct order:
|
|
|
|
#+begin_src bash
|
|
HEADERS=""
|
|
for i in $(cat table_of_contents)
|
|
do
|
|
HEADERS+="${i%.org}_type.h "
|
|
done
|
|
|
|
for i in $(cat table_of_contents)
|
|
do
|
|
HEADERS+="${i%.org}_func.h "
|
|
done
|
|
#+end_src
|
|
|
|
Generate C header file
|
|
|
|
#+begin_src bash
|
|
OUTPUT="${top_srcdir}/include/qmckl.h"
|
|
|
|
cat << EOF > ${OUTPUT}
|
|
/*
|
|
,* <<qmckl-header>>
|
|
,*/
|
|
|
|
#ifndef __QMCKL_H__
|
|
#define __QMCKL_H__
|
|
|
|
#include <stdlib.h>
|
|
#include <stdint.h>
|
|
#include <stdbool.h>
|
|
EOF
|
|
|
|
for i in ${HEADERS}
|
|
do
|
|
if [[ -f $i ]] ; then
|
|
cat $i >> ${OUTPUT}
|
|
fi
|
|
done
|
|
|
|
cat << EOF >> ${OUTPUT}
|
|
#endif
|
|
EOF
|
|
#+end_src
|
|
|
|
Generate Fortran interface file from all =qmckl_*_fh.f90= files
|
|
|
|
#+begin_src bash
|
|
HEADERS_TYPE="qmckl_*_fh_type.f90"
|
|
HEADERS="qmckl_*_fh_func.f90"
|
|
|
|
OUTPUT="${top_srcdir}/share/qmckl/fortran/qmckl_f.f90"
|
|
cat << EOF > ${OUTPUT}
|
|
!
|
|
! <<qmckl-header>>
|
|
!
|
|
module qmckl
|
|
use, intrinsic :: iso_c_binding
|
|
EOF
|
|
|
|
for i in ${HEADERS_TYPE}
|
|
do
|
|
cat $i >> ${OUTPUT}
|
|
done
|
|
|
|
for i in ${HEADERS}
|
|
do
|
|
cat $i >> ${OUTPUT}
|
|
done
|
|
|
|
cat << EOF >> ${OUTPUT}
|
|
end module qmckl
|
|
EOF
|
|
#+end_src
|
|
|
|
* Script to build the documentation
|
|
:PROPERTIES:
|
|
:header-args:bash: :tangle build_doc.sh :noweb yes :shebang #!/bin/bash :comments org
|
|
:END:
|
|
|
|
First define readonly global variables.
|
|
|
|
#+begin_src bash :noweb yes
|
|
readonly DOCS=${top_srcdir}/share/doc/qmckl/
|
|
readonly SRC=${top_srcdir}/src/
|
|
readonly HTMLIZE=${DOCS}/html/htmlize.el
|
|
readonly CONFIG_DOC=${top_srcdir}/tools/config_doc.el
|
|
readonly CONFIG_TANGLE=${top_srcdir}/tools/config_tangle.el
|
|
#+end_src
|
|
|
|
Check that all the defined global variables correspond to files.
|
|
|
|
#+begin_src bash :noweb yes
|
|
function check_preconditions()
|
|
{
|
|
if [[ -z ${top_srcdir} ]]
|
|
then
|
|
print "top_srcdir is not defined"
|
|
exit 1
|
|
fi
|
|
|
|
for dir in ${DOCS}/html ${DOCS}/text ${SRC}
|
|
do
|
|
if [[ ! -d ${dir} ]]
|
|
then
|
|
print "${dir} not found"
|
|
exit 2
|
|
fi
|
|
done
|
|
|
|
for file in ${CONFIG_DOC} ${CONFIG_TANGLE}
|
|
do
|
|
if [[ ! -f ${file} ]]
|
|
then
|
|
print "${file} not found"
|
|
exit 3
|
|
fi
|
|
done
|
|
}
|
|
#+end_src ~install_htmlize~ installs the htmlize Emacs plugin if the =htmlize.el= file is not present.
|
|
|
|
#+begin_src bash :noweb yes
|
|
function install_htmlize()
|
|
{
|
|
local url="https://github.com/hniksic/emacs-htmlize"
|
|
local repo="emacs-htmlize"
|
|
|
|
[[ -f ${HTMLIZE} ]] || (
|
|
cd ${DOCS}/html
|
|
git clone ${url} \
|
|
&& cp ${repo}/htmlize.el ${HTMLIZE} \
|
|
&& rm -rf ${repo}
|
|
cd -
|
|
)
|
|
|
|
# Assert htmlize is installed
|
|
[[ -f ${HTMLIZE} ]] \
|
|
|| exit 1
|
|
}
|
|
#+end_src
|
|
|
|
Extract documentation from an org-mode file.
|
|
|
|
#+begin_src bash :noweb yes
|
|
function extract_doc()
|
|
{
|
|
local org=$1
|
|
local local_html=${SRC}/${org%.org}.html
|
|
local local_text=${SRC}/${org%.org}.txt
|
|
local html=${DOCS}/html/${org%.org}.html
|
|
local text=${DOCS}/text/${org%.org}.txt
|
|
|
|
if [[ -f ${html} && ${org} -ot ${html} ]]
|
|
then
|
|
return
|
|
fi
|
|
emacs --batch \
|
|
--load ${HTMLIZE} \
|
|
--load ${CONFIG_DOC} \
|
|
${org} \
|
|
--load ${CONFIG_TANGLE} \
|
|
-f org-html-export-to-html \
|
|
-f org-ascii-export-to-ascii
|
|
mv ${local_html} ${DOCS}/html
|
|
mv ${local_text} ${DOCS}/text
|
|
|
|
}
|
|
#+end_src
|
|
|
|
The main function of the script.
|
|
|
|
#+begin_src bash :noweb yes
|
|
function main() {
|
|
|
|
check_preconditions || exit 1
|
|
|
|
# Install htmlize if needed
|
|
install_htmlize || exit 2
|
|
|
|
# Create documentation
|
|
cd ${SRC} \
|
|
|| exit 3
|
|
|
|
for i in *.org
|
|
do
|
|
echo
|
|
echo "======= ${i} ======="
|
|
extract_doc ${i}
|
|
done
|
|
|
|
if [[ $? -eq 0 ]]
|
|
then
|
|
cd ${DOCS}/html
|
|
rm -f index.html
|
|
ln README.html index.html
|
|
exit 0
|
|
else
|
|
exit 3
|
|
fi
|
|
}
|
|
main
|
|
#+end_src
|
|
|
|
|