mirror of
https://github.com/TREX-CoE/Sherman-Morrison.git
synced 2024-11-04 13:14:01 +01:00
218 lines
6.0 KiB
Python
218 lines
6.0 KiB
Python
|
# Look for and read all the run files in the current directory (ending with
|
||
|
# .vfcrun.hd5), and lanch a Bokeh server for the visualization of this data.
|
||
|
|
||
|
import os
|
||
|
import sys
|
||
|
import time
|
||
|
|
||
|
import pandas as pd
|
||
|
|
||
|
from bokeh.plotting import curdoc
|
||
|
|
||
|
# Local imports from vfc_ci_server
|
||
|
import compare_runs
|
||
|
import inspect_runs
|
||
|
import helper
|
||
|
|
||
|
################################################################################
|
||
|
|
||
|
|
||
|
# Read vfcrun files, and aggregate them in one dataset
|
||
|
|
||
|
run_files = [ f for f in os.listdir(".") if f.endswith(".vfcrun.hd5") ]
|
||
|
|
||
|
if len(run_files) == 0:
|
||
|
print(
|
||
|
"Warning [vfc_ci]: Could not find any vfcrun files in the directory. " \
|
||
|
"This will result in server errors and prevent you from viewing the report."
|
||
|
)
|
||
|
|
||
|
# These are arrays of Pandas dataframes for now
|
||
|
metadata = []
|
||
|
data = []
|
||
|
|
||
|
for f in run_files:
|
||
|
metadata.append(pd.read_hdf(f, "metadata"))
|
||
|
data.append(pd.read_hdf(f, "data"))
|
||
|
|
||
|
metadata = pd.concat(metadata).sort_index()
|
||
|
data = pd.concat(data).sort_index()
|
||
|
|
||
|
|
||
|
# Generate the display strings for runs (runs ticks)
|
||
|
# By doing this in master, we ensure the homogeneity of display strings
|
||
|
# across all plots
|
||
|
metadata["name"] = metadata.index.to_series().map(
|
||
|
lambda x: helper.get_run_name(
|
||
|
x,
|
||
|
helper.get_metadata(metadata, x)["hash"]
|
||
|
)
|
||
|
)
|
||
|
helper.reset_run_strings()
|
||
|
|
||
|
metadata["date"] = metadata.index.to_series().map(
|
||
|
lambda x: time.ctime(x)
|
||
|
)
|
||
|
|
||
|
|
||
|
################################################################################
|
||
|
|
||
|
|
||
|
curdoc().title = "Verificarlo Report"
|
||
|
|
||
|
|
||
|
# Read server arguments
|
||
|
# (this is quite easy because Bokeh server is called through a wrapper, so
|
||
|
# we know exactly what the arguments might be)
|
||
|
|
||
|
git_repo_linked = False
|
||
|
commit_link = ""
|
||
|
|
||
|
has_logo = False
|
||
|
logo_url = ""
|
||
|
|
||
|
for i in range(1, len(sys.argv)):
|
||
|
|
||
|
# Look for the Git repository remote address
|
||
|
# (if a Git repo is specified, the webpage will contain hyperlinks to the
|
||
|
# repository and the different commits)
|
||
|
if sys.argv[i] == "git":
|
||
|
from urllib.parse import urlparse
|
||
|
|
||
|
method = sys.argv[i + 1]
|
||
|
address = sys.argv[i + 2]
|
||
|
url = ""
|
||
|
|
||
|
|
||
|
# Here, address is either the remote URL or the path to the local Git
|
||
|
# repo (depending on the method)
|
||
|
|
||
|
if method == "url":
|
||
|
# We should directly have a Git URL
|
||
|
url = address
|
||
|
|
||
|
elif method == "directory":
|
||
|
# Get the remote URL from the local repo
|
||
|
from git import Repo
|
||
|
repo = Repo(address)
|
||
|
url = repo.remotes.origin.url
|
||
|
|
||
|
else:
|
||
|
raise ValueError(
|
||
|
"Error [vfc_ci]: The specified method to get the Git " \
|
||
|
"repository is invalid. Are you calling Bokeh directly " \
|
||
|
"instead of using the Verificarlo wrapper ?"
|
||
|
)
|
||
|
|
||
|
|
||
|
# At this point, "url" should be set correctly, we can get the repo's
|
||
|
# URL and name, after making sure we're on a Git URL
|
||
|
|
||
|
parsed_url = urlparse(url)
|
||
|
|
||
|
path = parsed_url.path.split("/")
|
||
|
if len(path) < 3:
|
||
|
raise ValueError(
|
||
|
"Error [vfc_ci]: The found URL doesn't seem to be pointing " \
|
||
|
"to a Git repository (path is too short)"
|
||
|
)
|
||
|
|
||
|
repo_name = path[2]
|
||
|
|
||
|
curdoc().template_variables["repo_url"] = url
|
||
|
curdoc().template_variables["repo_name"] = repo_name
|
||
|
|
||
|
|
||
|
# We should have a "github.com" or a "*gitlab*" URL
|
||
|
|
||
|
if parsed_url.netloc == "github.com":
|
||
|
commit_link = "https://%s%s/commit/" \
|
||
|
% (parsed_url.netloc, parsed_url.path)
|
||
|
|
||
|
curdoc().template_variables["commit_link"] = commit_link
|
||
|
curdoc().template_variables["git_host"] = "GitHub"
|
||
|
|
||
|
# Used in Bokeh tooltips
|
||
|
commit_link = commit_link + "@hash"
|
||
|
|
||
|
# We assume we have a GitLab URL
|
||
|
else:
|
||
|
commit_link = "https://%s%s/-/commit/" \
|
||
|
% (parsed_url.netloc, parsed_url.path)
|
||
|
|
||
|
curdoc().template_variables["commit_link"] = commit_link
|
||
|
curdoc().template_variables["git_host"] = "GitLab"
|
||
|
|
||
|
# Used in Bokeh tooltips
|
||
|
commit_link = commit_link + "@hash"
|
||
|
|
||
|
git_repo_linked = True
|
||
|
|
||
|
|
||
|
|
||
|
# Look for a logo URL
|
||
|
# If a logo URL is specified, it will be included in the report's header
|
||
|
if sys.argv[i] == "logo":
|
||
|
curdoc().template_variables["logo_url"] = sys.argv[i + 1]
|
||
|
has_logo = True
|
||
|
|
||
|
|
||
|
# After the loop, we know if a repo has been linked, if we have a logo, ...
|
||
|
curdoc().template_variables["git_repo_linked"] = git_repo_linked
|
||
|
curdoc().template_variables["has_logo"] = has_logo
|
||
|
|
||
|
|
||
|
################################################################################
|
||
|
|
||
|
|
||
|
# Setup report views
|
||
|
|
||
|
# Define a ViewsMaster class to allow two-ways communication between views.
|
||
|
# This approach by classes allows us to have separate scopes for each view and
|
||
|
# will be useful if we want to add new views at some point in the future
|
||
|
# (instead of having n views with n-1 references each).
|
||
|
|
||
|
class ViewsMaster:
|
||
|
|
||
|
# Communication functions
|
||
|
|
||
|
def go_to_inspect(self, run_name):
|
||
|
self.inspect.switch_view(run_name)
|
||
|
|
||
|
|
||
|
#Constructor
|
||
|
|
||
|
def __init__(self, data, metadata, git_repo_linked, commit_link):
|
||
|
|
||
|
self.data = data
|
||
|
self.metadata = metadata
|
||
|
self.git_repo_linked = git_repo_linked
|
||
|
self.commit_link = commit_link
|
||
|
|
||
|
# Pass metadata to the template as a JSON string
|
||
|
curdoc().template_variables["metadata"] = self.metadata.to_json(orient="index")
|
||
|
|
||
|
# Runs comparison
|
||
|
self.compare = compare_runs.CompareRuns(
|
||
|
master = self,
|
||
|
doc = curdoc(),
|
||
|
data = data,
|
||
|
metadata = metadata,
|
||
|
)
|
||
|
|
||
|
# Runs inspection
|
||
|
self.inspect = inspect_runs.InspectRuns(
|
||
|
master = self,
|
||
|
doc = curdoc(),
|
||
|
data = data,
|
||
|
metadata = metadata,
|
||
|
)
|
||
|
|
||
|
|
||
|
views_master = ViewsMaster(
|
||
|
data = data,
|
||
|
metadata = metadata,
|
||
|
git_repo_linked = git_repo_linked,
|
||
|
commit_link = commit_link
|
||
|
)
|