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dft_tools/python/symmetry.py

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################################################################################
#
# TRIQS: a Toolbox for Research in Interacting Quantum Systems
#
# Copyright (C) 2011 by M. Aichhorn, L. Pourovskii, V. Vildosola
#
# TRIQS is free software: you can redistribute it and/or modify it under the
# terms of the GNU General Public License as published by the Free Software
# Foundation, either version 3 of the License, or (at your option) any later
# version.
#
# TRIQS is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# TRIQS. If not, see <http://www.gnu.org/licenses/>.
#
################################################################################
import copy,numpy
import string
from types import *
from pytriqs.gf.local import *
from pytriqs.archive import *
import pytriqs.utility.mpi as mpi
class Symmetry:
"""This class provides the routines for applying symmetry operations for the k sums.
It contains the permutations of the atoms in the unti cell, and the corresponding
rotational matrices for each symmetry operation."""
def __init__(self, hdf_file, subgroup = None):
"""Initialises the class.
Reads the permutations and rotation matrizes from the file, and constructs the mapping for
the given orbitals. For each orbit a matrix is read!!!
SO: Flag for SO coupled calculations.
SP: Spin polarisation yes/no
"""
assert type(hdf_file)==StringType,"hdf_file must be a filename"; self.hdf_file = hdf_file
thingstoread = ['n_s','n_atoms','perm','orbits','SO','SP','time_inv','mat','mat_tinv']
for it in thingstoread: exec "self.%s = 0"%it
if (mpi.is_master_node()):
#Read the stuff on master:
ar = HDFArchive(hdf_file,'a')
if (subgroup is None):
ar2 = ar
else:
ar2 = ar[subgroup]
for it in thingstoread: exec "self.%s = ar2['%s']"%(it,it)
del ar2
del ar
#broadcasting
for it in thingstoread: exec "self.%s = mpi.bcast(self.%s)"%(it,it)
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# now define the mapping of orbitals:
# self.map[iorb]=jorb gives the permutation of the orbitals as given in the list, when the
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# permutation of the atoms is done:
self.n_orbits = len(self.orbits)
self.map = [ [0 for iorb in range(self.n_orbits)] for in_s in range(self.n_s) ]
for in_s in range(self.n_s):
for iorb in range(self.n_orbits):
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srch = copy.deepcopy(self.orbits[iorb])
srch[0] = self.perm[in_s][self.orbits[iorb][0]-1]
self.map[in_s][iorb] = self.orbits.index(srch)
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def symmetrize(self,obj):
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assert isinstance(obj,list),"obj has to be a list of objects!"
assert len(obj)==self.n_orbits,"obj has to be a list of the same length as defined in the init"
if (isinstance(obj[0],BlockGf)):
symm_obj = [ obj[i].copy() for i in range(len(obj)) ] # here the result is stored, it is a BlockGf!
for iorb in range(self.n_orbits): symm_obj[iorb].zero() # set to zero
else:
# if not a BlockGf, we assume it is a matrix (density matrix), has to be complex since self.mat is complex!
#symm_obj = [ numpy.zeros([self.orbits[iorb][3],self.orbits[iorb][3]],numpy.complex_) for iorb in range(self.n_orbits) ]
symm_obj = [ copy.deepcopy(obj[i]) for i in range(len(obj)) ]
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for iorb in range(self.n_orbits):
if (type(symm_obj[iorb])==DictType):
for ii in symm_obj[iorb]: symm_obj[iorb][ii] *= 0.0
else:
symm_obj[iorb] *= 0.0
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for in_s in range(self.n_s):
for iorb in range(self.n_orbits):
l = self.orbits[iorb][2] # s, p, d, or f
dim = self.orbits[iorb][3]
jorb = self.map[in_s][iorb]
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if (isinstance(obj[0],BlockGf)):
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tmp = obj[iorb].copy()
if (self.time_inv[in_s]): tmp <<= tmp.transpose()
for sig,gf in tmp: tmp[sig].from_L_G_R(self.mat[in_s][iorb],tmp[sig],self.mat[in_s][iorb].conjugate().transpose())
tmp *= 1.0/self.n_s
symm_obj[jorb] += tmp
else:
if (type(obj[iorb])==DictType):
for ii in obj[iorb]:
if (self.time_inv[in_s]==0):
symm_obj[jorb][ii] += numpy.dot(numpy.dot(self.mat[in_s][iorb],obj[iorb][ii]),
self.mat[in_s][iorb].conjugate().transpose()) / self.n_s
else:
symm_obj[jorb][ii] += numpy.dot(numpy.dot(self.mat[in_s][iorb],obj[iorb][ii].conjugate()),
self.mat[in_s][iorb].conjugate().transpose()) / self.n_s
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else:
if (self.time_inv[in_s]==0):
symm_obj[jorb] += numpy.dot(numpy.dot(self.mat[in_s][iorb],obj[iorb]),self.mat[in_s][iorb].conjugate().transpose()) / self.n_s
else:
symm_obj[jorb] += numpy.dot(numpy.dot(self.mat[in_s][iorb],obj[iorb].conjugate()),
self.mat[in_s][iorb].conjugate().transpose()) / self.n_s
# This does not what it is supposed to do, check how this should work:
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# if ((self.SO==0) and (self.SP==0)):
# # add time inv:
#mpi.report("Add time inversion")
# for iorb in range(self.n_orbits):
# if (isinstance(symm_obj[0],BlockGf)):
# tmp = symm_obj[iorb].copy()
# tmp <<= tmp.transpose()
# for sig,gf in tmp: tmp[sig].from_L_G_R(self.mat_tinv[iorb],tmp[sig],self.mat_tinv[iorb].transpose().conjugate())
# symm_obj[iorb] += tmp
# symm_obj[iorb] /= 2.0
#
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# else:
# if (type(symm_obj[iorb])==DictType):
# for ii in symm_obj[iorb]:
# symm_obj[iorb][ii] += numpy.dot(numpy.dot(self.mat_tinv[iorb],symm_obj[iorb][ii].conjugate()),
# self.mat_tinv[iorb].transpose().conjugate())
# symm_obj[iorb][ii] /= 2.0
# else:
# symm_obj[iorb] += numpy.dot(numpy.dot(self.mat_tinv[iorb],symm_obj[iorb].conjugate()),
# self.mat_tinv[iorb].transpose().conjugate())
# symm_obj[iorb] /= 2.0
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return symm_obj