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QCaml/Basis/ERI.ml

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(** Electron-electron repulsion integrals *)
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open Util
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open Constants
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open Bigarray
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type t = (float, float32_elt, fortran_layout) Bigarray.Genarray.t
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module Am = AngularMomentum
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module Bs = Basis
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module Cs = ContractedShell
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module Csp = ContractedShellPair
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let cutoff = integrals_cutoff
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(** (00|00)^m : Fundamental electron repulsion integral
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$ \int \int \phi_p(r1) 1/r_{12} \phi_q(r2) dr_1 dr_2 $
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maxm : Maximum total angular momentum
expo_pq_inv : $1./p + 1./q$ where $p$ and $q$ are the exponents of
$\phi_p$ and $\phi_q$
norm_pq_sq : square of the distance between the centers of $\phi_p$
and $\phi_q$
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*)
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let zero_m ~maxm ~expo_pq_inv ~norm_pq_sq =
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let exp_pq = 1. /. expo_pq_inv in
let t = norm_pq_sq *. exp_pq in
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let f = two_over_sq_pi *. (sqrt exp_pq) in
let result = boys_function ~maxm t in
let rec aux accu k = function
| 0 -> result.(k) <- result.(k) *. accu
| l ->
begin
result.(k) <- result.(k) *. accu;
let new_accu = -. accu *. exp_pq in
aux new_accu (k+1) (l-1)
end
in
aux f 0 maxm;
result
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(** Compute all the integrals of a contracted class *)
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let contracted_class_shell_pairs ?schwartz_p ?schwartz_q shell_p shell_q : float Zmap.t =
TwoElectronRR.contracted_class_shell_pairs ~zero_m ?schwartz_p ?schwartz_q shell_p shell_q
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let contracted_class_shell_pairs_vec ?schwartz_p ?schwartz_q shell_p shell_q : float Zmap.t =
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TwoElectronRRVectorized.contracted_class_shell_pairs ~zero_m ?schwartz_p ?schwartz_q shell_p shell_q
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let cutoff2 = cutoff *. cutoff
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(*
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type n_cls = { n : int ; cls : Zkey.t array }
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*)
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exception NullIntegral
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(*
(** Unique index for integral <ij|kl> *)
let index i j k l =
let f i k =
let (p,r) =
if i <= k then (i,k) else (k,i)
in p+ (r*r-r)/2
in
let p = f i k and q = f j l in
f p q
*)
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let of_basis basis =
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let to_powers x =
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let open Zkey in
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match to_powers x with
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| Three x -> x
| _ -> assert false
in
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let n = Bs.size basis
and shell = Bs.contracted_shells basis
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in
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(* Pre-compute all shell pairs *)
let shell_pairs =
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Csp.of_contracted_shell_array shell
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in
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(* Pre-compute diagonal integrals for Schwartz *)
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let t0 = Unix.gettimeofday () in
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let schwartz =
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Array.map (fun pair_array -> Array.map (function
| None -> (Zmap.create 0, 0.)
| Some pair ->
let cls =
contracted_class_shell_pairs pair pair
in
(cls, Zmap.fold (fun key value accu -> max (abs_float value) accu) cls 0. )
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) pair_array ) shell_pairs
in
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let icount = ref 0 in
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for i=0 to (Array.length shell) - 1 do
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print_int (Cs.index shell.(i)) ; print_newline ();
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for j=0 to i do
let schwartz_p, schwartz_p_max = schwartz.(i).(j) in
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if (schwartz_p_max >= cutoff) then
icount := !icount + 1;
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done;
done;
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Printf.printf "%d shell pairs computed in %f seconds\n" !icount (Unix.gettimeofday () -. t0);
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(* Group shell pairs by common pairs of atoms *)
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(* 4D data initialization *)
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let eri_array =
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Genarray.create Float32 fortran_layout [| n ; n ; n ; n|]
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in
Genarray.fill eri_array 0.;
(* Compute ERIs *)
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let t0 = Unix.gettimeofday () in
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let inn = ref 0 and out = ref 0 in
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for i=0 to (Array.length shell) - 1 do
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print_int (Cs.index shell.(i)) ; print_newline ();
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for j=0 to i do
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let schwartz_p, schwartz_p_max = schwartz.(i).(j) in
try
if (schwartz_p_max < cutoff) then raise NullIntegral;
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let shell_p =
match shell_pairs.(i).(j) with
| None -> raise NullIntegral
| Some x -> x
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in
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let sp =
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Csp.shell_pairs shell_p
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in
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for k=0 to i do
for l=0 to k do
let schwartz_q, schwartz_q_max = schwartz.(k).(l) in
try
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if schwartz_p_max *. schwartz_q_max < cutoff2 then
raise NullIntegral;
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let shell_q =
match shell_pairs.(k).(l) with
| None -> raise NullIntegral
| Some x -> x
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in
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let sq =
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Csp.shell_pairs shell_q
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in
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let swap =
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Array.length sp > Array.length sq
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in
(* Compute all the integrals of the class *)
let cls =
if swap then
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if (Array.length sp) + (Array.length sq) < 4 then
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contracted_class_shell_pairs ~schwartz_p:schwartz_q ~schwartz_q:schwartz_p shell_q shell_p
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else
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contracted_class_shell_pairs_vec ~schwartz_p:schwartz_q ~schwartz_q:schwartz_p shell_q shell_p
else
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if (Array.length sp) + (Array.length sq) < 4 then
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contracted_class_shell_pairs ~schwartz_p ~schwartz_q shell_p shell_q
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else
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contracted_class_shell_pairs_vec ~schwartz_p ~schwartz_q shell_p shell_q
in
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(* Write the data in the output file *)
Array.iteri (fun i_c powers_i ->
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let i_c = Cs.index shell.(i) + i_c + 1 in
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let xi = to_powers powers_i in
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Array.iteri (fun j_c powers_j ->
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let j_c = Cs.index shell.(j) + j_c + 1 in
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let xj = to_powers powers_j in
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Array.iteri (fun k_c powers_k ->
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let k_c = Cs.index shell.(k) + k_c + 1 in
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let xk = to_powers powers_k in
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Array.iteri (fun l_c powers_l ->
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let l_c = Cs.index shell.(l) + l_c + 1 in
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let xl = to_powers powers_l in
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let key =
if swap then
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Zkey.of_powers_twelve xk xl xi xj
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else
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Zkey.of_powers_twelve xi xj xk xl
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in
let value =
Zmap.find cls key
in
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eri_array.{i_c,k_c,j_c,l_c} <- value;
eri_array.{j_c,k_c,i_c,l_c} <- value;
eri_array.{i_c,l_c,j_c,k_c} <- value;
eri_array.{j_c,l_c,i_c,k_c} <- value;
eri_array.{k_c,i_c,l_c,j_c} <- value;
eri_array.{k_c,j_c,l_c,i_c} <- value;
eri_array.{l_c,i_c,k_c,j_c} <- value;
eri_array.{l_c,j_c,k_c,i_c} <- value;
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if (abs_float value > cutoff) then
(inn := !inn + 1;
)
else
out := !out + 1;
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) Am.(zkey_array (Singlet (Cs.ang_mom shell.(l))))
) Am.(zkey_array (Singlet (Cs.ang_mom shell.(k))))
) Am.(zkey_array (Singlet (Cs.ang_mom shell.(j))))
) Am.(zkey_array (Singlet (Cs.ang_mom shell.(i))))
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with NullIntegral -> ()
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done;
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done;
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with NullIntegral -> ()
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done;
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done;
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Printf.printf "In: %d Out:%d\n" !inn !out ;
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Printf.printf "Computed ERIs in %f seconds\n%!" (Unix.gettimeofday () -. t0);
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eri_array
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(** Write all integrals to a file with the <ij|kl> convention *)
let to_file ~filename eri_array =
let oc = open_out filename in
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(* Print ERIs *)
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for l_c=1 to (Genarray.nth_dim eri_array 3) do
for k_c=1 to l_c do
for j_c=1 to l_c do
for i_c=1 to k_c do
let value = eri_array.{i_c,j_c,k_c,l_c} in
if (abs_float value > cutoff) then
Printf.fprintf oc " %5d %5d %5d %5d%20.15f\n" i_c j_c k_c l_c value;
done;
done;
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done;
done;
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close_out oc