mirror of
https://github.com/TREX-CoE/trexio.git
synced 2024-12-22 20:35:44 +01:00
29d927675e
* minor cleaning * create functions for dictionary parsers in the external file * remove files_exclude since post-processing does the job * no need to have group_group_dset when propagatin dsets * oneliner for paths to templates * add dset_per_group dict * add function to iteratively populate string based on triggers list * added recursive replacer for numbers * add recursive replaces for datasets * add function for text groups [iterative+recursive upd] * do not define triggers in the master script * transition to helper dictionaries * cleaning * comment main code blocks * rearrange parameters * add documentation strings to the functions * minor cleaning and changes * adapt build_trexio script * add consisteny check for dimensioning variables
97 lines
2.3 KiB
Bash
Executable File
97 lines
2.3 KiB
Bash
Executable File
#!/bin/bash
|
|
|
|
# Check that script is executed from tools directory
|
|
if [[ $(basename $PWD) != "tools" ]] ; then
|
|
echo "This script should run in the tools directory"
|
|
exit -1
|
|
fi
|
|
|
|
TREXIO_ROOT=$(dirname "${PWD}../")
|
|
|
|
# First define readonly global variables.
|
|
readonly SRC=${TREXIO_ROOT}/src
|
|
readonly TOOLS=${TREXIO_ROOT}/tools
|
|
|
|
# Function to produce TREXIO source files from org-mode files
|
|
function tangle()
|
|
{
|
|
local command="(org-babel-tangle-file \"$1\")"
|
|
emacs --batch \
|
|
--eval "(require 'org)" \
|
|
--eval "(org-babel-do-load-languages 'org-babel-load-languages '((python . t)))" \
|
|
--eval "(setq org-confirm-babel-evaluate nil)" \
|
|
--eval "$command"
|
|
}
|
|
|
|
# Create trex.json file
|
|
cd ${TREXIO_ROOT}
|
|
tangle trex.org
|
|
|
|
# Go to src directory
|
|
cd ${SRC}
|
|
|
|
# We want the script to crash on the 1st error:
|
|
set -e
|
|
|
|
# Create directories for templates
|
|
echo "create populated directories"
|
|
mkdir -p templates_front/populated
|
|
mkdir -p templates_text/populated
|
|
mkdir -p templates_hdf5/populated
|
|
|
|
# It is important to ad '--' to rm because it tells rm that what follows are
|
|
# not options. It is safer.
|
|
|
|
# Cleaning of existing data
|
|
echo "remove existing templates"
|
|
rm -f -- templates_front/*.{c,h,f90}
|
|
rm -f -- templates_text/*.{c,h}
|
|
rm -f -- templates_hdf5/*.{c,h}
|
|
|
|
echo "clean populated directories"
|
|
rm -f -- templates_front/populated/*
|
|
rm -f -- templates_text/populated/*
|
|
rm -f -- templates_hdf5/populated/*
|
|
|
|
# Produce source files for front end
|
|
echo "tangle org files to generate templates"
|
|
cd templates_front
|
|
tangle templator_front.org
|
|
cd ..
|
|
|
|
# Produce source files for TEXT back end
|
|
cd templates_text
|
|
tangle templator_text.org
|
|
cd ..
|
|
|
|
# Produce source files for HDF5 back end
|
|
cd templates_hdf5
|
|
tangle templator_hdf5.org
|
|
cd ..
|
|
|
|
# Populate templates with TREXIO structure according to trex.json file
|
|
echo "run generator script to populate templates"
|
|
cp ${TOOLS}/generator.py ${TOOLS}/generator_tools.py ${SRC}
|
|
python3 generator.py
|
|
rm -f -- ${SRC}/generator.py ${SRC}/generator_tools.py
|
|
rm -f -r -- ${SRC}/__pycache__/
|
|
|
|
# Put pieces of source files together
|
|
echo "compile populated files in the lib source files "
|
|
cd templates_front
|
|
source build.sh
|
|
cp trexio* ../
|
|
cd ..
|
|
mv trexio.h trexio_f.f90 ../include
|
|
|
|
cd templates_text
|
|
source build.sh
|
|
cp trexio* ../
|
|
cd ..
|
|
|
|
cd templates_hdf5
|
|
source build.sh
|
|
cp trexio* ../
|
|
cd ..
|
|
|