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https://github.com/TREX-CoE/trexio.git
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286 lines
10 KiB
HTML
286 lines
10 KiB
HTML
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
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"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
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<head>
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<!-- 2021-11-17 Wed 13:23 -->
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<meta http-equiv="Content-Type" content="text/html;charset=utf-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1" />
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<title>‎</title>
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<meta name="generator" content="Org mode" />
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<style type="text/css">
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#postamble p, #preamble p { font-size: 90%; margin: .2em; }
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pre {
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pre.src-awk:before { content: 'Awk'; }
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/* pre.src-C++ doesn't work in CSS */
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pre.src-css:before { content: 'CSS'; }
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pre.src-sql:before { content: 'SQL'; }
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pre.src-sqlite:before { content: 'SQLite'; }
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/* additional languages in org.el's org-babel-load-languages alist */
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pre.src-forth:before { content: 'Forth'; }
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/* additional language identifiers per "defun org-babel-execute"
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in ob-*.el */
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pre.src-cpp:before { content: 'C++'; }
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pre.src-abc:before { content: 'ABC'; }
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pre.src-coq:before { content: 'Coq'; }
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ob-shell.el: ob-shell is the only babel language using a lambda to put
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the execution function name together. */
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pre.src-bash:before { content: 'bash'; }
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pre.src-csh:before { content: 'csh'; }
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pre.src-ash:before { content: 'ash'; }
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pre.src-dash:before { content: 'dash'; }
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/* Additional Emacs modes also supported by the LaTeX listings package */
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pre.src-delphi:before { content: 'Delphi'; }
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pre.src-html:before { content: 'HTML'; }
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pre.src-idl:before { content: 'IDL'; }
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pre.src-mercury:before { content: 'Mercury'; }
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pre.src-metapost:before { content: 'MetaPost'; }
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pre.src-tcl:before { content: 'tcl'; }
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pre.src-tex:before { content: 'TeX'; }
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pre.src-plain-tex:before { content: 'Plain TeX'; }
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pre.src-verilog:before { content: 'Verilog'; }
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pre.src-vhdl:before { content: 'VHDL'; }
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pre.src-xml:before { content: 'XML'; }
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/* add a generic configuration mode; LaTeX export needs an additional
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(add-to-list 'org-latex-listings-langs '(conf " ")) in .emacs */
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table { border-collapse:collapse; }
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dt { font-weight: bold; }
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border: 2px solid gray;
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margin: 10px;
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background: #ffffcc;
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#org-div-home-and-up
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{ text-align: right; font-size: 70%; white-space: nowrap; }
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textarea { overflow-x: auto; }
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#org-info-js_console-label
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{ font-size: 10px; font-weight: bold; white-space: nowrap; }
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.org-info-js_search-highlight
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{ background-color: #ffff00; color: #000000; font-weight: bold; }
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.org-svg { width: 90%; }
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/*]]>*/-->
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</style>
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<script type="text/javascript">
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/*
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@licstart The following is the entire license notice for the
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JavaScript code in this tag.
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Copyright (C) 2012-2019 Free Software Foundation, Inc.
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The JavaScript code in this tag is free software: you can
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redistribute it and/or modify it under the terms of the GNU
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General Public License (GNU GPL) as published by the Free Software
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Foundation, either version 3 of the License, or (at your option)
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any later version. The code is distributed WITHOUT ANY WARRANTY;
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without even the implied warranty of MERCHANTABILITY or FITNESS
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FOR A PARTICULAR PURPOSE. See the GNU GPL for more details.
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As additional permission under GNU GPL version 3 section 7, you
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may distribute non-source (e.g., minimized or compacted) forms of
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that code without the copy of the GNU GPL normally required by
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section 4, provided you include this license notice and a URL
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through which recipients can access the Corresponding Source.
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@licend The above is the entire license notice
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for the JavaScript code in this tag.
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*/
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<!--/*--><![CDATA[/*><!--*/
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function CodeHighlightOn(elem, id)
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{
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var target = document.getElementById(id);
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function CodeHighlightOff(elem, id)
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target.className = elem.cacheClassTarget;
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}
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/*]]>*///-->
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</script>
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</head>
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<body>
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<div id="content">
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<div id="table-of-contents">
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<h2>Table of Contents</h2>
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<div id="text-table-of-contents">
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<ul>
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<li><a href="#orgb5b4d33">1. Text back end</a></li>
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<li><a href="#org70761b6">2. HDF5 Back end</a></li>
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</ul>
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</div>
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</div>
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<p>
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See templator<sub>front.org</sub>
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</p>
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<div id="outline-container-orgb5b4d33" class="outline-2">
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<h2 id="orgb5b4d33"><span class="section-number-2">1</span> Text back end</h2>
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<div class="outline-text-2" id="text-1">
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<p>
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As the size of the dataset should be extensible, the simplest
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solution is to use one file for each sparse data set, and store a
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the name of this file in the group.
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Each integral can be a line in the file:
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i j k l x
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which can be read with "%10ld %10ld %10ld %10ld %24.16e".
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The offset can be used with <code>fseek(69L*offset, SEEK_SET)</code>
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</p>
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</div>
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</div>
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<div id="outline-container-org70761b6" class="outline-2">
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<h2 id="org70761b6"><span class="section-number-2">2</span> HDF5 Back end</h2>
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<div class="outline-text-2" id="text-2">
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<p>
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We need to declare the number of rows of the dataset as
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<code>UNLIMITED</code>. This requires to use the <code>Chunked</code> storage, and the
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chunks should absolutely not be larger than 1MB.
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</p>
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<p>
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To extend the storage, see :
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<a href="https://support.hdfgroup.org/HDF5/doc1.6/UG/10_Datasets.html">https://support.hdfgroup.org/HDF5/doc1.6/UG/10_Datasets.html</a>
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(figure 17)
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</p>
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<p>
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If the offset+num > nmax, we need to extend the dataset.
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</p>
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</div>
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</div>
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</div>
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<div id="postamble" class="status">
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<p class="date">Created: 2021-11-17 Wed 13:23</p>
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<p class="validation"><a href="http://validator.w3.org/check?uri=referer">Validate</a></p>
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</div>
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</body>
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</html>
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