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559 lines
18 KiB
Fortran
559 lines
18 KiB
Fortran
program test_trexio
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use trexio
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use, intrinsic :: iso_c_binding
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implicit none
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integer :: rc
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logical :: have_hdf5
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print'(a)' , "============================================"
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print'(a,a)' , " TREXIO VERSION STRING : ", TREXIO_PACKAGE_VERSION
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print'(a,i3)', " TREXIO MAJOR VERSION : ", TREXIO_VERSION_MAJOR
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print'(a,i3)', " TREXIO MINOR VERSION : ", TREXIO_VERSION_MINOR
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print'(a)' , "============================================"
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rc = trexio_info()
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call system('rm -f -- test_write_f.dir/*.txt test_write_f.dir/*.txt.size test_write_f.dir/.lock && rm -fd -- test_write_f.dir')
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print *, 'call test_write(''test_write_f.dir'', TREXIO_TEXT)'
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call test_write('test_write_f.dir', TREXIO_TEXT)
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print *, 'call test_read(''test_write_f.dir'', TREXIO_TEXT)'
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call test_read('test_write_f.dir', TREXIO_TEXT)
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call system('rm -f -- test_write_f.dir/*.txt test_write_f.dir/*.txt.size test_write_f.dir/.lock && rm -fd -- test_write_f.dir')
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call test_read_void('test_write_f.dir', TREXIO_TEXT)
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! No way to conditionally check whether compilation was done with HDF5
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! So temporarily disable the test for HDF5 back end at the moment
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have_hdf5 = trexio_has_backend(TREXIO_HDF5)
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if (have_hdf5) then
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call system('rm -f -- test_write_f.h5')
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print *, 'call test_write(''test_write_f.h5'', TREXIO_HDF5)'
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call test_write('test_write_f.h5', TREXIO_HDF5)
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print *, 'call test_read(''test_write_f.h5'', TREXIO_HDF5)'
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call test_read('test_write_f.h5', TREXIO_HDF5)
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call system('rm -f -- test_write_f.h5')
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call test_read_void('test_write_f.h5', TREXIO_HDF5)
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endif
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end program test_trexio
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subroutine test_write(file_name, back_end)
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! ============ Test write functionality =============== !
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use trexio
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use, intrinsic :: iso_c_binding
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implicit none
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character*(*), intent(in) :: file_name
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integer, intent(in) :: back_end
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integer(trexio_t) :: trex_file
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integer(trexio_exit_code) :: rc = 1
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integer :: nucleus_num, mo_num, ao_num, basis_shell_num
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integer :: basis_nucleus_index(24)
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double precision :: charge(12)
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double precision :: coord(3,12)
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character(len=:), allocatable :: sym_str
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character(len=:), allocatable :: label(:)
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double precision, allocatable :: energy(:)
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integer , allocatable :: spin(:)
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! sparse data
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integer(4) :: index_sparse_ao_2e_int_eri(4,100)
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double precision :: value_sparse_ao_2e_int_eri(100)
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! determinants
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integer*8 :: det_list(6, 50)
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integer*8 :: det_num
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integer :: int_num
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integer :: i, j, n_buffers = 5
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integer(8) :: buf_size_sparse, buf_size_det, offset
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buf_size_sparse = 100/n_buffers
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buf_size_det = 50/n_buffers
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! fill sparse indices and values
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do i = 1, 100
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index_sparse_ao_2e_int_eri(1,i) = 4*i - 3
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index_sparse_ao_2e_int_eri(2,i) = 4*i+1 - 3
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index_sparse_ao_2e_int_eri(3,i) = 4*i+2 - 3
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index_sparse_ao_2e_int_eri(4,i) = 4*i+3 - 3
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value_sparse_ao_2e_int_eri(i) = 3.14 + float(i)
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enddo
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! fill determinant list
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do i = 1, 50
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do j = 1, 6
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det_list(j,i) = 6*i+(j-1) - 5
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enddo
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enddo
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! parameters to be written
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nucleus_num = 12
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charge = (/ 6., 6., 6., 6., 6., 6., 1., 1., 1., 1., 1., 1. /)
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coord = reshape( (/ 0.00000000d0, 1.39250319d0 , 0.00000000d0 , &
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-1.20594314d0, 0.69625160d0 , 0.00000000d0 , &
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-1.20594314d0, -0.69625160d0 , 0.00000000d0 , &
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0.00000000d0, -1.39250319d0 , 0.00000000d0 , &
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1.20594314d0, -0.69625160d0 , 0.00000000d0 , &
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1.20594314d0, 0.69625160d0 , 0.00000000d0 , &
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-2.14171677d0, 1.23652075d0 , 0.00000000d0 , &
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-2.14171677d0, -1.23652075d0 , 0.00000000d0 , &
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0.00000000d0, -2.47304151d0 , 0.00000000d0 , &
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2.14171677d0, -1.23652075d0 , 0.00000000d0 , &
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2.14171677d0, 1.23652075d0 , 0.00000000d0 , &
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0.00000000d0, 2.47304151d0 , 0.00000000d0 /), &
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shape(coord) )
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! the first dimension of det_list (6) corresponds to mo_num=150; adapt the former if the latter is changed
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mo_num = 150
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ao_num = 1000
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basis_shell_num = 24
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basis_nucleus_index = (/ 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24 /)
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label = [character(len=8) :: 'C', 'Na','C', 'C 66', 'C','C', 'H 99', 'Ru', 'H', 'H', 'H', 'H' ]
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sym_str = 'B3U with some comments'
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! ================= START OF TEST ===================== !
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rc = trexio_inquire(file_name)
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call trexio_assert(rc, TREXIO_FAILURE)
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trex_file = trexio_open(file_name, 'w', back_end, rc)
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call trexio_assert(rc, TREXIO_SUCCESS)
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rc = trexio_has_nucleus_num(trex_file)
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call trexio_assert(rc, TREXIO_HAS_NOT, 'SUCCESS HAS NOT 1')
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rc = trexio_has_nucleus_charge(trex_file)
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call trexio_assert(rc, TREXIO_HAS_NOT, 'SUCCESS HAS NOT 2')
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rc = trexio_has_ao_2e_int_eri(trex_file)
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call trexio_assert(rc, TREXIO_HAS_NOT, 'SUCCESS HAS NOT 3')
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rc = trexio_has_determinant_list(trex_file)
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call trexio_assert(rc, TREXIO_HAS_NOT, 'SUCCESS HAS NOT 4')
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rc = trexio_has_nucleus(trex_file)
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call trexio_assert(rc, TREXIO_HAS_NOT, 'SUCCESS HAS NOT 5')
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rc = trexio_has_ao_2e_int(trex_file)
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call trexio_assert(rc, TREXIO_HAS_NOT, 'SUCCESS HAS NOT 6')
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rc = trexio_write_nucleus_num(trex_file, nucleus_num)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE NUM')
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rc = trexio_write_nucleus_charge(trex_file, charge)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE CHARGE')
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rc = trexio_write_nucleus_coord(trex_file, coord)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE COORD')
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rc = trexio_write_nucleus_label(trex_file, label, 5)
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deallocate(label)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE LABEL')
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rc = trexio_write_nucleus_point_group(trex_file, sym_str, 32)
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deallocate(sym_str)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE POINT GROUP')
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rc = trexio_write_basis_shell_num(trex_file, basis_shell_num)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE BASIS NUM')
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rc = trexio_write_basis_nucleus_index(trex_file, basis_nucleus_index)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE INDEX')
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! write ao_num which will be used to determine the optimal size of int indices
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if (trexio_has_ao_num(trex_file) == TREXIO_HAS_NOT) then
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rc = trexio_write_ao_num(trex_file, ao_num)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE AO NUM')
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endif
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! write mo_num which will be used to determine the optimal size of the determinants bit fields
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if (trexio_has_mo_num(trex_file) == TREXIO_HAS_NOT) then
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rc = trexio_write_mo_num(trex_file, mo_num)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE MO NUM')
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endif
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allocate(energy(mo_num))
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do i=1,mo_num
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energy(i) = dble(i)-100.d0
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enddo
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rc = trexio_write_mo_energy(trex_file, energy)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE ENERGY')
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deallocate(energy)
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allocate(spin(mo_num))
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spin(:) = 0
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do i=mo_num/2+1,mo_num
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spin(i) = 1
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enddo
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rc = trexio_write_mo_spin(trex_file, spin)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE SPIN')
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deallocate(spin)
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offset = 0
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do i = 1,n_buffers
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rc = trexio_write_ao_2e_int_eri(trex_file, offset, buf_size_sparse, &
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index_sparse_ao_2e_int_eri(1,offset+1), &
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value_sparse_ao_2e_int_eri(offset+1))
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE SPARSE')
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offset = offset + buf_size_sparse
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enddo
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offset = 0
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do i = 1,n_buffers
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rc = trexio_write_determinant_list(trex_file, offset, buf_size_det, &
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det_list(1,offset+1))
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS WRITE DET LIST')
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offset = offset + buf_size_det
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enddo
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rc = trexio_has_nucleus_num(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS HAS 1')
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rc = trexio_has_nucleus_coord(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS HAS 2')
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rc = trexio_has_ao_2e_int_eri(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS HAS 3')
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rc = trexio_has_determinant_list(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS HAS 4')
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rc = trexio_has_nucleus(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS HAS 5')
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rc = trexio_has_ao_2e_int(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS HAS 6')
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rc = trexio_close(trex_file)
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call trexio_assert(rc, TREXIO_SUCCESS, 'SUCCESS CLOSE')
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! ================= END OF TEST ===================== !
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end subroutine test_write
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subroutine test_read(file_name, back_end)
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! ============ Test read functionality =============== !
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use trexio
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implicit none
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character*(*), intent(in) :: file_name
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integer, intent(in) :: back_end
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integer(trexio_t) :: trex_file
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integer :: i, j, k, ind, offset, flag
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integer(trexio_exit_code) :: rc = 1
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integer :: num, num_read, basis_shell_num
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integer :: basis_nucleus_index(24)
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double precision :: charge(12)
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double precision :: coord(3,12)
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character :: label_str(128)
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character(len=4) :: tmp_str
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character(len=4) :: label(12) ! also works with allocatable arrays
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character(len=32) :: sym_str
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integer :: mo_num
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double precision, allocatable :: energy(:)
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integer , allocatable :: spin(:)
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! sparse data
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integer(4) :: index_sparse_ao_2e_int_eri(4,20)
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double precision :: value_sparse_ao_2e_int_eri(20)
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integer(8) :: read_buf_size = 10
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integer(8) :: read_buf_size_save = 10
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integer(8) :: offset_read = 40
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integer(8) :: offset_data_read = 5
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integer(8) :: offset_eof = 97
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integer(8) :: offset_data_eof = 1
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integer(8) :: size_toread = 0
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! determinant data
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integer*8 :: det_list(6,50)
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integer*8 :: det_list_check(3)
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integer*8 :: read_buf_det_size = 20
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integer*8 :: offset_det_read = 10
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integer*8 :: offset_det_data_read = 5
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integer*8 :: determinant_num
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integer :: int_num
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! orbital lists
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integer*4 :: orb_list_up(150)
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integer*4 :: orb_list_dn(150)
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integer*4 :: occ_num_up, occ_num_dn
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character*(128) :: str
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num = 12
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basis_shell_num = 24
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index_sparse_ao_2e_int_eri = 0
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value_sparse_ao_2e_int_eri = 0.0d0
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det_list = 0_8
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orb_list_up = 0
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orb_list_dn = 0
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! ================= START OF TEST ===================== !
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rc = trexio_inquire(file_name)
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call trexio_assert(rc, TREXIO_SUCCESS)
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trex_file = trexio_open(file_name, 'r', TREXIO_AUTO, rc)
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call trexio_assert(rc, TREXIO_SUCCESS)
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rc = trexio_read_nucleus_num(trex_file, num_read)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (num_read == num) then
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write(*,*) 'SUCCESS READ NUM'
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else
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print *, 'FAILURE NUM CHECK'
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call exit(-1)
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endif
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rc = trexio_read_nucleus_charge(trex_file, charge)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (dabs(charge(11) - 1.d0) < 1.0D-8) then
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write(*,*) 'SUCCESS READ CHARGE'
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else
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print *, 'FAILURE CHARGE CHECK'
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call exit(-1)
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endif
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rc = trexio_read_nucleus_coord(trex_file, coord)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (dabs(coord(2,1) - 1.39250319d0) < 1.0D-8) then
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write(*,*) 'SUCCESS READ COORD'
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else
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print *, 'FAILURE COORD CHECK'
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call exit(-1)
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endif
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rc = trexio_read_nucleus_label(trex_file, label, 4)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (trim(label(2)) == 'Na' .and. &
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trim(label(4)) == 'C 66' .and. &
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trim(label(5)) == 'C') then
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write(*,*) 'SUCCESS READ LABEL'
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else
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print *, 'FAILURE LABEL CHECK'
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call exit(-1)
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endif
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rc = trexio_read_basis_nucleus_index(trex_file, basis_nucleus_index)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (basis_nucleus_index(12) == 12) then
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write(*,*) 'SUCCESS READ INDEX'
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else
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print *, 'FAILURE INDEX CHECK'
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call exit(-1)
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endif
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rc = trexio_read_nucleus_point_group(trex_file, sym_str, 10)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (sym_str(1:3) == 'B3U') then
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write(*,*) 'SUCCESS READ POINT GROUP'
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else
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print *, 'FAILURE POINT GROUP CHECK'
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call exit(-1)
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endif
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rc = trexio_read_ao_2e_int_eri(trex_file, offset_read, read_buf_size, &
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index_sparse_ao_2e_int_eri(1, offset_data_read + 1), &
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value_sparse_ao_2e_int_eri(offset_data_read + 1))
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!do i = 1,20
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! write(*,*) index_sparse_ao_2e_int_eri(1,i)
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!enddo
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (index_sparse_ao_2e_int_eri(1, 1) == 0 .and. &
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index_sparse_ao_2e_int_eri(1, offset_data_read + 1) == offset_read*4 + 1) then
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write(*,*) 'SUCCESS READ SPARSE DATA'
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else
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print *, 'FAILURE SPARSE DATA CHECK'
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call exit(-1)
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endif
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! attempt to read reaching EOF: should return TREXIO_END and
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! NOT increment the existing values in the buffer (only upd with what has been read)
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rc = trexio_read_ao_2e_int_eri(trex_file, offset_eof, read_buf_size, &
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index_sparse_ao_2e_int_eri(1, offset_data_eof + 1), &
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value_sparse_ao_2e_int_eri(offset_data_eof + 1))
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!do i = 1,20
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! write(*,*) index_sparse_ao_2e_int_eri(1,i)
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!enddo
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call trexio_assert(rc, TREXIO_END)
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if (read_buf_size == 3 .and. &
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index_sparse_ao_2e_int_eri(1, 1) == 0 .and. &
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index_sparse_ao_2e_int_eri(1, offset_data_read + 1) == offset_read*4 + 1 .and. &
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index_sparse_ao_2e_int_eri(1, offset_data_eof + 1) == offset_eof*4 + 1) then
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write(*,*) 'SUCCESS READ SPARSE DATA EOF'
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read_buf_size = read_buf_size_save
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else
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print *, 'FAILURE SPARSE DATA EOF CHECK'
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call exit(-1)
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endif
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! read the size (number of integrals) of the sparse dataset
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rc = trexio_read_ao_2e_int_eri_size(trex_file, size_toread)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (size_toread == 100) then
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write(*,*) 'SUCCESS READ SPARSE SIZE'
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else
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print *, 'FAILURE SPARSE SIZE CHECK'
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call exit(-1)
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endif
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! obtain a number of int64 bit fields per determinant
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rc = trexio_get_int64_num(trex_file, int_num)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (int_num == 3) then
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write(*,*) 'SUCCESS GET INT64_NUM'
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else
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print *, 'FAILURE DET INT64_NUM CHECK'
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call exit(-1)
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endif
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! read a chunk of determinants
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rc = trexio_read_determinant_list(trex_file, offset_det_read, read_buf_det_size, &
|
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det_list(1, offset_det_data_read + 1))
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!do i = 1,50
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! write(*,*) det_list(1,i)
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!enddo
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (det_list(1, 1) == 0 .and. &
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det_list(1, offset_det_data_read + 1) == offset_det_read*6 + 1) then
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write(*,*) 'SUCCESS READ DET LIST'
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else
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print *, 'FAILURE DET LIST CHECK'
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call exit(-1)
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endif
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|
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! read the total number of stored determinants
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rc = trexio_read_determinant_num_64(trex_file, determinant_num)
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call trexio_assert(rc, TREXIO_SUCCESS)
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if (determinant_num == 50_8) then
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|
write(*,*) 'SUCCESS READ DET NUM'
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|
else
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print *, 'FAILURE DET NUM CHECK'
|
|
call exit(-1)
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endif
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|
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! convert one given determinant into lists of orbitals
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rc = trexio_to_orbital_list_up_dn(3, det_list(:, offset_det_data_read+1), orb_list_up, orb_list_dn, occ_num_up, occ_num_dn)
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!write(*,*) occ_num_up, occ_num_dn
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|
! Print occupied orbitals for an up-spin component of a given determinant
|
|
!write(*,*) orb_list_up(1:occ_num_up)
|
|
! Print integers representanting a given determinant fully (up- and down-spin components)
|
|
!write(*,*) det_list(:, offset_det_data_read+1)
|
|
! Print binary representation of the first integer bit field of a given determinant
|
|
!write(*,'(B64.64)') det_list(1, offset_det_data_read+1)
|
|
call trexio_assert(rc, TREXIO_SUCCESS)
|
|
if (occ_num_up == 16 .and. occ_num_dn == 5) then
|
|
write(*,*) 'SUCCESS CONVERT DET LIST'
|
|
else
|
|
print *, 'FAILURE DET CONVERT CHECK'
|
|
call exit(-1)
|
|
endif
|
|
|
|
! convert one orbital list into a bitfield determinant representation
|
|
rc = trexio_to_bitfield_list(orb_list_up, occ_num_up, det_list_check, 3)
|
|
!write(*,*) occ_num_up, occ_num_dn
|
|
! Print occupied orbitals for an up-spin component of a given determinant
|
|
!write(*,*) orb_list_up(1:occ_num_up)
|
|
! Print integers representanting a given determinant fully (up- and down-spin components)
|
|
!write(*,*) det_list(1:3, offset_det_data_read+1)
|
|
!write(*,*) det_list_check(1:3)
|
|
! Print binary representation of the first integer bit field of a given determinant
|
|
!write(*,'(B64.64)') det_list(1, offset_det_data_read+1)
|
|
call trexio_assert(rc, TREXIO_SUCCESS)
|
|
if (det_list_check(1) == det_list(1, offset_det_data_read+1) .and. &
|
|
det_list_check(2) == det_list(2, offset_det_data_read+1) .and. &
|
|
det_list_check(3) == det_list(3, offset_det_data_read+1)) then
|
|
write(*,*) 'SUCCESS CONVERT ORB LIST'
|
|
else
|
|
print *, 'FAILURE ORB CONVERT CHECK'
|
|
call exit(-1)
|
|
endif
|
|
|
|
rc = trexio_read_mo_num(trex_file, mo_num)
|
|
call trexio_assert(rc, TREXIO_SUCCESS)
|
|
|
|
allocate(spin(mo_num), energy(mo_num))
|
|
rc = trexio_read_mo_energy(trex_file, energy)
|
|
call trexio_assert(rc, TREXIO_SUCCESS)
|
|
|
|
if (energy(10) /= -90.d0) then
|
|
print *, 'Failure to read MO energy: ', energy(10)
|
|
call exit(-1)
|
|
end if
|
|
|
|
rc = trexio_read_mo_spin(trex_file, spin)
|
|
call trexio_assert(rc, TREXIO_SUCCESS)
|
|
|
|
if (sum(spin) /= mo_num/2) then
|
|
print *, 'Failure to read MO spin', mo_num, sum(spin)
|
|
call exit(-1)
|
|
end if
|
|
|
|
! close the file
|
|
rc = trexio_close(trex_file)
|
|
call trexio_assert(rc, TREXIO_SUCCESS)
|
|
|
|
! ================= END OF TEST ===================== !
|
|
|
|
end subroutine test_read
|
|
|
|
subroutine test_read_void(file_name, back_end)
|
|
|
|
! ============ Test read of non-existing file =============== !
|
|
|
|
use trexio
|
|
implicit none
|
|
|
|
character*(*), intent(in) :: file_name
|
|
integer, intent(in) :: back_end
|
|
|
|
integer(8) :: trex_file
|
|
integer :: rc = 1
|
|
character(128) :: str
|
|
|
|
! ================= START OF TEST ===================== !
|
|
|
|
trex_file = trexio_open(file_name, 'r', back_end, rc)
|
|
if (rc /= TREXIO_OPEN_ERROR) then
|
|
rc = trexio_close(trex_file)
|
|
endif
|
|
call trexio_assert(rc, TREXIO_OPEN_ERROR)
|
|
|
|
call trexio_string_of_error(rc, str)
|
|
print *, 'Test error message: ', trim(str)
|
|
|
|
! ================= END OF TEST ===================== !
|
|
|
|
end subroutine test_read_void
|