mirror of
https://github.com/TREX-CoE/trexio.git
synced 2024-12-23 04:43:57 +01:00
29d927675e
* minor cleaning * create functions for dictionary parsers in the external file * remove files_exclude since post-processing does the job * no need to have group_group_dset when propagatin dsets * oneliner for paths to templates * add dset_per_group dict * add function to iteratively populate string based on triggers list * added recursive replacer for numbers * add recursive replaces for datasets * add function for text groups [iterative+recursive upd] * do not define triggers in the master script * transition to helper dictionaries * cleaning * comment main code blocks * rearrange parameters * add documentation strings to the functions * minor cleaning and changes * adapt build_trexio script * add consisteny check for dimensioning variables
97 lines
2.3 KiB
Bash
Executable File
97 lines
2.3 KiB
Bash
Executable File
#!/bin/bash
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# Check that script is executed from tools directory
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if [[ $(basename $PWD) != "tools" ]] ; then
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echo "This script should run in the tools directory"
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exit -1
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fi
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TREXIO_ROOT=$(dirname "${PWD}../")
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# First define readonly global variables.
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readonly SRC=${TREXIO_ROOT}/src
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readonly TOOLS=${TREXIO_ROOT}/tools
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# Function to produce TREXIO source files from org-mode files
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function tangle()
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{
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local command="(org-babel-tangle-file \"$1\")"
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emacs --batch \
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--eval "(require 'org)" \
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--eval "(org-babel-do-load-languages 'org-babel-load-languages '((python . t)))" \
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--eval "(setq org-confirm-babel-evaluate nil)" \
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--eval "$command"
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}
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# Create trex.json file
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cd ${TREXIO_ROOT}
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tangle trex.org
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# Go to src directory
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cd ${SRC}
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# We want the script to crash on the 1st error:
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set -e
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# Create directories for templates
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echo "create populated directories"
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mkdir -p templates_front/populated
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mkdir -p templates_text/populated
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mkdir -p templates_hdf5/populated
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# It is important to ad '--' to rm because it tells rm that what follows are
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# not options. It is safer.
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# Cleaning of existing data
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echo "remove existing templates"
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rm -f -- templates_front/*.{c,h,f90}
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rm -f -- templates_text/*.{c,h}
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rm -f -- templates_hdf5/*.{c,h}
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echo "clean populated directories"
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rm -f -- templates_front/populated/*
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rm -f -- templates_text/populated/*
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rm -f -- templates_hdf5/populated/*
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# Produce source files for front end
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echo "tangle org files to generate templates"
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cd templates_front
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tangle templator_front.org
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cd ..
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# Produce source files for TEXT back end
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cd templates_text
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tangle templator_text.org
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cd ..
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# Produce source files for HDF5 back end
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cd templates_hdf5
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tangle templator_hdf5.org
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cd ..
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# Populate templates with TREXIO structure according to trex.json file
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echo "run generator script to populate templates"
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cp ${TOOLS}/generator.py ${TOOLS}/generator_tools.py ${SRC}
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python3 generator.py
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rm -f -- ${SRC}/generator.py ${SRC}/generator_tools.py
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rm -f -r -- ${SRC}/__pycache__/
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# Put pieces of source files together
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echo "compile populated files in the lib source files "
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cd templates_front
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source build.sh
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cp trexio* ../
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cd ..
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mv trexio.h trexio_f.f90 ../include
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cd templates_text
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source build.sh
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cp trexio* ../
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cd ..
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cd templates_hdf5
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source build.sh
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cp trexio* ../
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cd ..
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