# =========================================================================== # Debian-adapted script from the hdf5-manylinux repo: # https://github.com/h5py/hdf5-manylinux/blob/master/install_hdf5.sh # =========================================================================== set -euo pipefail pushd /tmp # This seems to be needed to find libsz.so.2 ldconfig echo "Downloading & unpacking HDF5 ${HDF5_VERSION}" # Remove trailing .*, to get e.g. '1.12' ↓ curl -fsSLO "https://www.hdfgroup.org/ftp/HDF5/releases/hdf5-${HDF5_VERSION%.*}/hdf5-$HDF5_VERSION/src/hdf5-$HDF5_VERSION.tar.gz" tar -xzvf hdf5-$HDF5_VERSION.tar.gz pushd hdf5-$HDF5_VERSION chmod u+x autogen.sh echo "Configuring, building & installing HDF5 ${HDF5_VERSION} to ${HDF5_DIR}" ./configure --prefix $HDF5_DIR --enable-build-mode=production --with-szlib make -j $(nproc) make install popd # Clean up to limit the size of the Docker image echo "Cleaning up unnecessary files" rm -r hdf5-$HDF5_VERSION rm hdf5-$HDF5_VERSION.tar.gz apt-get -y remove zlib1g-dev