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ab3f56c023
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remove jupyter from requirements.txt
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2021-09-10 14:02:10 +02:00 |
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93c13e7824
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Merge branch 'swig-python' of github.com:TREX-CoE/trexio into swig-python
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2021-09-10 13:54:30 +02:00 |
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q-posev
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39c7587b5e
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more portable setup of environment variables for install_pytrexio.sh
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2021-09-10 13:36:51 +02:00 |
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40d5fc31fc
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check that the data object exists before reading it from the file
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2021-09-10 09:38:26 +02:00 |
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c63d420c7f
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WIP: Docker containers and bash scripts to produce manylinux wheels for different platforms
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2021-09-09 17:35:24 +02:00 |
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dcfe1da870
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better documentation
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2021-09-09 17:29:17 +02:00 |
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569fac5578
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move set_NUMPY_INCLUDEDIR into tools directory
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2021-09-09 17:28:37 +02:00 |
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b9c3ddb30e
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FIX: bug related to import numpy in setup.py script
use the custom NUMPY_INCLUDEDIR environment variable derived from a call to numpy.get_include
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2021-09-09 15:09:26 +02:00 |
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58b611e21b
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add setuptools and jupyter to requirements.txt
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2021-09-09 15:08:01 +02:00 |
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09937c58c5
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better README
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2021-09-09 15:06:26 +02:00 |
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b9bbf178c5
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add make python-sdist rule
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2021-09-09 15:06:16 +02:00 |
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a8d14f4c79
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better README for python
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2021-09-08 19:53:45 +02:00 |
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04529823f6
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add README file for the Python API
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2021-09-08 19:34:16 +02:00 |
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67e59f156c
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explicitly provide __version__ attribute of the trexio module
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2021-09-08 19:28:18 +02:00 |
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04a713590a
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FIX bug due to the direct import of numpy in the setup script
+ add more classifiers
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2021-09-08 19:26:30 +02:00 |
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f24a274c4d
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add requirements file with packages needed for a proper setup
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2021-09-07 17:32:23 +02:00 |
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e72fbb4645
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minor fixed in setup script to be compatible with Docker containers
+ replaced dependency on h5py with numpy
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2021-09-07 17:31:25 +02:00 |
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96678fea2e
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adapt write functions to receive multidimensional arrays or lists
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2021-09-07 17:14:23 +02:00 |
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3e82fd9ae8
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FIX: a bug that was leading to Python and valgrind errors
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2021-08-31 12:11:22 +03:00 |
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ced8210ff0
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BUG: trexio_open fails when test script is executed from outside the root test directory
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2021-08-30 18:23:24 +03:00 |
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74c69bb293
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better Exception handling with custom exception class
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2021-08-30 18:04:35 +03:00 |
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ad44e29e95
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fix bug with Python version import
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2021-08-30 15:08:26 +03:00 |
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cf51d3971f
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read module version from _version.py file
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2021-08-30 13:46:11 +03:00 |
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fdc9a975b9
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add empty line between function headers
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2021-08-30 12:52:36 +03:00 |
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b8aff45d3b
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add notes on Python build and installation issues
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2021-08-27 16:14:33 +03:00 |
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5a2b4d96a7
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reshape output arrays by default when reading from the file
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2021-08-27 16:08:39 +03:00 |
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7b5ebf6272
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implement TREXIO File class and change import of pytrexio module
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2021-08-26 17:01:53 +03:00 |
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4c28a4cac8
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add type converters for numerical arrays in read/write Python functions
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2021-08-26 13:14:46 +03:00 |
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d4badd0cf4
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Fix build issues on OLYMPE
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2021-08-25 16:49:27 +03:00 |
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1dcd32ef7d
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add SWIG typemaps for safe API calls in single and double precision
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2021-08-25 13:31:17 +03:00 |
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ed7e3902e2
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add memory-safe functions in single or double precision
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2021-08-24 13:32:01 +03:00 |
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2911e91941
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make dim an optional argument in read_ functions
if dim is None - the function read all necessary dimensions from the TREXIO file
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2021-08-24 12:51:43 +03:00 |
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c7565e9dec
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minor changes
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2021-08-24 11:51:29 +03:00 |
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1b05157316
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get HDF5 compilation flags from pythonic pkgconfig
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2021-08-24 11:48:46 +03:00 |
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c3cc76c492
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fix a typo and add SWIG to requirements for developers
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2021-08-24 11:39:46 +03:00 |
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f30c6f60a6
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document test_api file
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2021-08-21 13:14:59 +03:00 |
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6f7c23aa11
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add missing annotations
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2021-08-21 13:13:55 +03:00 |
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4fe86ee980
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add Python docstrings for API functions
+ move definition of Fortran and Python back ends from Constant Prefixes to Back Ends section
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2021-08-21 12:47:36 +03:00 |
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ed47bad056
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roll back names in PKG_CHECK_MODULES
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2021-08-21 11:58:42 +03:00 |
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8b22494f2f
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LDFLAGS may contain several items and should be passed second
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2021-08-20 16:31:22 +03:00 |
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9f674b1add
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fix bug due to HDF5 name duplication in PKG_CHECK_MODULES
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2021-08-20 16:30:05 +03:00 |
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09823dd6a0
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more portable build of the Python extension module with HDF5 paths propagated from configure script
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2021-08-20 15:21:49 +03:00 |
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aee68dd619
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add Autoconf macro for SWIG
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2021-08-20 15:20:09 +03:00 |
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5d5025ae1d
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get rid of _safe suffix and add dimension to read_dset_str functions
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2021-08-20 13:43:15 +03:00 |
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831973fc8e
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better python compilation
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2021-08-18 16:28:43 +03:00 |
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8d8658fabf
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minor cleaning + exception handling for an unsafe call to the safe API
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2021-08-18 15:42:10 +03:00 |
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902147b45b
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better structure of the python directory
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2021-08-18 15:40:42 +03:00 |
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df91b9e7e5
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better cleaning of the python part
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2021-08-18 15:02:54 +03:00 |
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4ebd13b040
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change pytrexio to trexio + comments on compatibility tags and editable installations
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2021-08-18 13:46:16 +03:00 |
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cb1e83ca57
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adapt tests to check both pytrexio and trexio_api modules
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2021-08-18 13:40:27 +03:00 |
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