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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-11-04 21:24:08 +01:00
Commit Graph

413 Commits

Author SHA1 Message Date
75af136d4f Moved sparse documentation in src/templates_front/templator_front.org 2021-06-03 13:56:45 +02:00
313ab12c61 adapt tests to use TREXIO_DELIM as a delimeter 2021-06-03 13:42:56 +02:00
aa4251b943 read_group_dset can operate on char* directly instead of char** 2021-06-03 13:41:43 +02:00
d2bc25ef03 less allocations in the front end 2021-06-03 13:39:02 +02:00
40bfc581ee use newline char as a delimeter 2021-06-03 10:26:19 +02:00
5043d058bd Merge branch 'automake' of github.com:TREX-CoE/trexio into automake 2021-06-03 09:57:57 +02:00
a5ae1d239b Improve HDF5 in configure 2021-06-03 01:25:20 +02:00
06153d10cc add C test for file reopening to write missing blocks 2021-06-02 20:22:34 +02:00
693f8d3846 fix file reopening for writing new variables 2021-06-02 20:19:39 +02:00
093692c785 fix Fortran test + add clean-local target 2021-06-02 18:45:05 +02:00
7a9d078859 remove append mode 2021-06-02 14:40:23 +02:00
f5542571d1 remove test of append mode 2021-06-02 14:34:49 +02:00
8f570d2fd9 fix C test 2021-06-02 14:24:27 +02:00
0b5136f14c add error handling for an attempt to overwrite something 2021-06-02 14:23:58 +02:00
6d1e9df1a3 Fixing HDF5 in configure 2021-06-02 12:09:26 +02:00
ed66a8c0cf Fixed Fortran test 2021-06-02 11:54:07 +02:00
6ee9221f33 Fix Makefile.am 2021-06-02 11:39:35 +02:00
8aa4721758 Documentation 2021-06-02 11:19:03 +02:00
40cecd1f4e Typo 2021-06-02 10:44:03 +02:00
3a6e7c93af Function prototypes in tests 2021-06-02 10:27:11 +02:00
f6407397cf Typo 2021-06-02 00:02:42 +02:00
196224c63b use newline character as a delimeter for array of strings 2021-06-01 18:12:15 +02:00
0f444074c9 better error handling [front] 2021-06-01 16:45:13 +02:00
69ffb6c3b5 Tests fail 2021-06-01 15:03:37 +02:00
13fe1e8690 [WIP] working tests with string converters 2021-06-01 14:59:08 +02:00
6979c84c38 parse char* strings and convert them to char** for back ends 2021-06-01 14:58:16 +02:00
f45fee6cbf explicit types for strings [HDF5] 2021-06-01 10:41:00 +02:00
753c767ce2 first working prototype for string datasets [HDF5] 2021-05-31 16:42:11 +02:00
edfe8817d1 [WIP] temporarily disable calls to text back end 2021-05-31 16:40:25 +02:00
1647e76fcf [WIP] adapt generator for string datasets 2021-05-31 16:39:21 +02:00
9142c21130 add C test for nucleus_label 2021-05-31 16:37:00 +02:00
b5a6987758 first prototype of read/write string datasets 2021-05-31 13:26:52 +02:00
c18b75a11d explicit string type in front end templates 2021-05-28 17:53:26 +02:00
8b580fee4a Automake done. Need to improve tests 2021-05-28 13:36:39 +02:00
893dda8581 Working on configure 2021-05-28 12:34:58 +02:00
732780430d Working on automake 2021-05-28 12:23:19 +02:00
b172b506ff Moved config.h in include 2021-05-28 12:19:15 +02:00
e46d314a5f Check for C99 2021-05-28 12:16:32 +02:00
1c0b17f809 Removed obsolete AC_PROG_CC_C99 2021-05-28 11:43:34 +02:00
bddb2e0269 synchronize trex.json 2021-05-27 23:31:30 +02:00
7f241687a8 Added autogen.sh 2021-05-27 23:29:38 +02:00
42f81b2cc6 prepare templates and files for datasets with strings [all] 2021-05-27 15:14:01 +02:00
7ddb9228f1 split dataset files in _str and _data groups 2021-05-27 15:03:13 +02:00
70531b0ff6 more general group_dset_h5_dtype variable in the templates [hdf5] 2021-05-27 13:59:45 +02:00
1575c1f4d0 add functions for has/read/write_dset_str [front] 2021-05-27 13:58:35 +02:00
Evgeny Posenitskiy
29d927675e
Major refactoring of the generator script (#47)
* minor cleaning

* create functions for dictionary parsers in the external file

* remove files_exclude since post-processing does the job

* no need to have group_group_dset when propagatin dsets

* oneliner for paths to templates

* add dset_per_group dict

* add function to iteratively populate string based on triggers list

* added recursive replacer for numbers

* add recursive replaces for datasets

* add function for text groups  [iterative+recursive upd]

* do not define triggers in the master script

* transition to helper dictionaries

* cleaning

* comment main code blocks

* rearrange parameters

* add documentation strings to the functions

* minor cleaning and changes

* adapt build_trexio script

* add consisteny check for dimensioning variables
2021-05-26 19:11:46 +02:00
331e3d64fd Added prim_factor 2021-05-25 00:01:59 +02:00
1618441112 Fixed JSON 2021-05-24 15:45:30 +02:00
c5779f17f9 Detect error in JSON.org 2021-05-24 15:01:04 +02:00
32a44df569 More documentation in TREX JSON 2021-05-21 14:04:19 +02:00