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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-07-22 18:57:39 +02:00
Commit Graph

853 Commits

Author SHA1 Message Date
q-posev
c9b7273652 Update ChangeLog 2022-01-26 14:00:39 +01:00
q-posev
550cc73603 Fix portability issue with sed on MacOS 2022-01-26 14:00:05 +01:00
213e51f606
Merge pull request #80 from TREX-CoE/add-auto-backend
Add auto backend
2022-01-25 17:20:03 +01:00
246847b8d5 Merge branch 'master' into add-auto-backend 2022-01-25 16:24:34 +01:00
bc92e139da
Merge pull request #79 from TREX-CoE/add-unsafe-open-mode
Add unsafe open mode
2022-01-25 16:18:23 +01:00
d9309f5ab2 modify some tests to use TREXIO_AUTO back end 2022-01-25 15:00:55 +01:00
a65b22eebb add TREXIO_AUTO back end for READONLY (r) mode 2022-01-25 14:59:51 +01:00
4e5bb5472a remove merge leftovers 2022-01-25 13:17:49 +01:00
dcdac7dbf9 add metadata_unsafe attribute to trex.json; write it upon first unsafe trexio_open 2022-01-25 11:13:32 +01:00
8947f6caa7 Merge branch 'master' into add-unsafe-open-mode 2022-01-24 18:25:52 +01:00
Evgeny Posenitskiy
d46d4adab8
Merge pull request #78 from TREX-CoE/add-inquire-functionality
Add trexio_info function
2022-01-24 18:21:47 +01:00
6ac4e0c761 add tests for the unsafe mode in the Python API 2022-01-24 16:29:40 +01:00
82e7cd058b add overwriting functionality for unsafe mode [HDF5] 2022-01-24 16:15:31 +01:00
f68a59417e add overwriting functionality for unsafe mode [TEXT] 2022-01-24 16:13:27 +01:00
179e0c8dfc document the HDF5 issue with releasing the free space
suggest using h5repack after each deletion to get the file size right
2022-01-24 11:52:25 +01:00
7ba6924a8a add unit tests for delete_group functionality 2022-01-24 10:12:44 +01:00
8c157454d3 [WIP] add delete_group functions to the generator 2022-01-24 10:10:45 +01:00
6fe5a1eaa7 [WIP] add delete_group functions and unsafe trexio_open mode 2022-01-24 10:10:16 +01:00
Evgeny Posenitskiy
f3d17da7b8
Merge branch 'master' into add-inquire-functionality 2022-01-21 12:33:32 +01:00
Evgeny Posenitskiy
ba2e0691ba
Merge pull request #77 from TREX-CoE/iso_fortran_env
Using ISO_C_BINDING types in trexio_f.f90
2022-01-21 12:32:14 +01:00
734f813544 remove C-kind integer types for TREXIO_VERSION-s in Fortran 2022-01-21 12:28:15 +01:00
3e65a74676 better documentation for trexio_inquire function 2022-01-21 10:07:36 +01:00
2a9cfb3fa4 [CMake] add minor support for pthreads and stdint 2022-01-20 17:32:01 +01:00
5db1de3d3c add GIT_HASH and TREXIO_USER_NAME variables to CMake 2022-01-20 14:56:10 +01:00
4afd9cf2c1 Merge branch 'master' into add-inquire-functionality 2022-01-20 14:32:50 +01:00
5e82e0fc57 add tests for trexio_info 2022-01-20 14:22:32 +01:00
23c1601442 add trexio_info function 2022-01-20 14:21:54 +01:00
8817a86cf6 Minor fixes 2022-01-20 11:13:28 +01:00
7cb1ca8d68 add missing checks for NULL pointers 2022-01-20 10:54:22 +01:00
73a8ef1925 Renamed backend -> back_end for consistency + Better type names, using types in functions. 2022-01-20 09:58:27 +01:00
0651ef66b6 Removed erroneous c_double 2022-01-19 22:03:25 +01:00
81c41c1ffc Merge branch 'master' into iso_fortran_env 2022-01-19 19:45:58 +01:00
78c632f93f
Merge pull request #74 from TREX-CoE/build_fixes
Build fixes
2022-01-19 19:33:23 +01:00
e3d1026a41 iso_c_binding 2022-01-19 19:16:03 +01:00
16e9a815d2 Using iso_c_binding types in trexio_f.f90 2022-01-19 19:13:52 +01:00
51c43fe1ac
Merge pull request #75 from TREX-CoE/add-inquire-functionality
Add inquire functionality
2022-01-19 15:13:57 +01:00
2ce3f09c7f return --force-reinstall option to manual Python installation 2022-01-19 14:09:28 +01:00
e9db0c66d4 add tests 2022-01-19 14:08:38 +01:00
550c5c3954 implement trexio_inquire function in front and back ends 2022-01-19 14:06:10 +01:00
Pablo Lopez Rios
57973eaca0 templator_front.org: undo two unnecessary changes 2022-01-19 10:38:01 +00:00
Pablo Lopez Rios
9e5d81b292 Use c_int64_t and c_int32_t as requested by Evgeny Posenitskiy. 2022-01-19 10:23:11 +00:00
Pablo Lopez Rios
36a05c184d Use cmake's configure_file() as suggested by Evgeny Posenitskiy. 2022-01-19 10:14:31 +00:00
Pablo Lopez Rios
0e9b9f1900 trexio_f: fix complaints from gfortran 11, including data type issues
This includes:
* Define kind of arguments of bind(C) procedures using the relevant C
  types provided by iso_c_binding.
* Replaced "call exit(1)" with "error stop 1".
* Fixed a couple of implicit type conversions between 4-/8-byte
  integers.

The first two fix compilation of the Fortran module with -std=f2008.
2022-01-18 16:58:07 +00:00
Pablo Lopez Rios
223f91a9b1 README.md: added a bit more compilation help 2022-01-18 14:38:48 +00:00
Pablo Lopez Rios
f89e542f26 gitignore editor swap/backup files, suggested build directory, build byproducts 2022-01-18 14:14:27 +00:00
Pablo Lopez Rios
12a7454c0c Fix cmake compilation.
This includes:
* Declare generated source files in include/ as GENERATED in
  TREXIO_DEVEL mode.
* Generate include/config.h with version components from project
  delcaration, and for good measure have src/templates_front/build.sh
  set version components to 0 if not present.
2022-01-18 14:04:00 +00:00
e4073d0a8c add PyPI version badge to README 2022-01-17 19:14:58 +01:00
fe75b72752 Fix bug: clean docs/ only in the maintainer mode
Previously there was an issue that make clean in the distribution tarball was cleaning the docs/ directory but there was no rule to tangle the HTML files when not in the maintainer mode
2022-01-13 13:26:12 +01:00
d8f4e4206d Typo in doc 2022-01-10 19:21:28 +01:00
77dbd5fa43 Typo in doc 2022-01-10 10:34:27 +01:00