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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-12-23 12:56:53 +01:00
Commit Graph

308 Commits

Author SHA1 Message Date
d44883f0ea add search bar
close #40
2021-11-19 12:50:12 +01:00
527417cd8f fix type conversion for 32-bit indices 2021-11-18 14:33:18 +01:00
72c355c7cc Top-level CMakeLists with subdirectories 2021-11-17 14:00:35 +01:00
954ee4216c add trexio_has_backend function to the C and Fortran APIs 2021-11-02 11:05:27 +01:00
7f3ee3cc18 reset back end values and add TREXIO_BACK_END_MISSING error 2021-11-02 10:32:00 +01:00
5504bc0fe6 wrap TREXIO_INVALID_BACK_END definition in preprocessor macro 2021-11-01 13:22:46 +01:00
d42dc7f449 optional HDF5 compilation
via configure script and pre-processor macros
2021-11-01 11:55:34 +01:00
1812deb9dd Check return value of mkdtemp 2021-10-14 10:53:15 +02:00
5cf12131f1 Fix text back end for read-only directories (make distcheck in qmckl) 2021-10-13 17:43:15 +02:00
d017306706 Better error handling with open in text back end 2021-10-13 16:13:24 +02:00
954b26ccff Update README 2021-10-13 14:24:54 +02:00
fb9c95bd61 add version attributes to the Fortran module 2021-10-08 13:55:56 +02:00
947a8a12f8 Fix bug due to PACKAGE_VERSION definition in trexio.h 2021-10-07 09:54:19 +02:00
68284161d3 downgrade numpy.i SWIG interface to numpy 1.17.3 2021-09-30 17:22:50 +02:00
2e2dac3982 modify rc_open only if it is not a NULL pointer 2021-09-24 12:23:59 +02:00
67b00efa9c handle return error of trexio_open in the Python API 2021-09-22 16:40:55 +02:00
9457a826d2 return error code from trexio_open [C, Fortran] 2021-09-22 14:50:22 +02:00
14472cda48 better error handling in case of invalid dimensioning variable 2021-09-22 11:33:27 +02:00
389d265f7f fix cppcheck warnings regarding redundant size_dset_str checks 2021-09-21 16:08:04 +02:00
d1a9af4185 remove blank spaces in front of pointers 2021-09-21 15:54:11 +02:00
788f7e666d read single numerical attributes based on _isSet bool flag 2021-09-21 15:41:12 +02:00
d5405e700c raise TREXIO_INVALID_ARG_2 also when writing zero as dimensioning variable 2021-09-21 14:35:29 +02:00
6459543afd better front end documentation for numerical attributes 2021-09-21 10:58:07 +02:00
11a17c65d3 add attr_ prefix to the template file name for numerical attributes 2021-09-21 10:41:37 +02:00
c22e9d2925 put back sanity check that dimensioning variables are positive 2021-09-20 17:00:05 +02:00
ce0d98b984 add conversion of float-like attributes into an output tuple 2021-09-20 15:52:55 +02:00
4b9827048f adapt the templates in back ends 2021-09-20 15:51:36 +02:00
261e7c8b84 modify front end for more general numerical attributes 2021-09-20 13:16:44 +02:00
11dadaab36 add tutorial HTML page to the main documentation 2021-09-15 13:43:57 +02:00
f251f0afba remove unnecessary comments in the SWIG interface 2021-09-14 17:30:05 +02:00
d04106f72d max_str_len should be int32_t to properly check for negative values 2021-09-13 13:35:45 +02:00
1589995775 do not use warnings for an attempt to overwrite in the Python API 2021-09-13 11:46:31 +02:00
2bd4ef9bfd add has_ functions to the Python API 2021-09-13 11:29:00 +02:00
77e3f1ac11 print UserWarning instead of raising Error for an attempt to overwrite data
following suggestion of Vijay G.C.
2021-09-12 14:24:50 +02:00
d060808467 do not reveal paths to trexio (security concerns) 2021-09-12 13:36:24 +02:00
12dd1fd8dc apply some suggestions from cppcheck 2021-09-12 13:25:03 +02:00
40d5fc31fc check that the data object exists before reading it from the file 2021-09-10 09:38:26 +02:00
67e59f156c explicitly provide __version__ attribute of the trexio module 2021-09-08 19:28:18 +02:00
96678fea2e adapt write functions to receive multidimensional arrays or lists 2021-09-07 17:14:23 +02:00
3e82fd9ae8 FIX: a bug that was leading to Python and valgrind errors 2021-08-31 12:11:22 +03:00
74c69bb293 better Exception handling with custom exception class 2021-08-30 18:04:35 +03:00
5a2b4d96a7 reshape output arrays by default when reading from the file 2021-08-27 16:08:39 +03:00
7b5ebf6272 implement TREXIO File class and change import of pytrexio module 2021-08-26 17:01:53 +03:00
4c28a4cac8 add type converters for numerical arrays in read/write Python functions 2021-08-26 13:14:46 +03:00
1dcd32ef7d add SWIG typemaps for safe API calls in single and double precision 2021-08-25 13:31:17 +03:00
ed7e3902e2 add memory-safe functions in single or double precision 2021-08-24 13:32:01 +03:00
2911e91941 make dim an optional argument in read_ functions
if dim is None - the function read all necessary dimensions from the TREXIO file
2021-08-24 12:51:43 +03:00
6f7c23aa11 add missing annotations 2021-08-21 13:13:55 +03:00
4fe86ee980 add Python docstrings for API functions
+ move definition of Fortran and Python back ends from Constant Prefixes to Back Ends section
2021-08-21 12:47:36 +03:00
5d5025ae1d get rid of _safe suffix and add dimension to read_dset_str functions 2021-08-20 13:43:15 +03:00