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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-12-23 04:43:57 +01:00
Commit Graph

98 Commits

Author SHA1 Message Date
9f2b4b9075 Remove warning when tangling 2021-10-06 10:31:06 +02:00
72c8d01f34 adapt consistency check of array dimensions for dim type 2021-09-22 11:23:17 +02:00
0167a53d50 add dim type for dimensioning variables in the trex.json 2021-09-22 10:56:25 +02:00
11a17c65d3 add attr_ prefix to the template file name for numerical attributes 2021-09-21 10:41:37 +02:00
c22e9d2925 put back sanity check that dimensioning variables are positive 2021-09-20 17:00:05 +02:00
2497a80f90 adapt triggers in the generator_tools 2021-09-20 15:51:57 +02:00
261e7c8b84 modify front end for more general numerical attributes 2021-09-20 13:16:44 +02:00
b1f1aee7ab Merge branch 'master' into swig-python 2021-09-10 14:04:15 +02:00
04529823f6 add README file for the Python API 2021-09-08 19:34:16 +02:00
fdc9a975b9 add empty line between function headers 2021-08-30 12:52:36 +03:00
4c28a4cac8 add type converters for numerical arrays in read/write Python functions 2021-08-26 13:14:46 +03:00
d4badd0cf4 Fix build issues on OLYMPE 2021-08-25 16:49:27 +03:00
c7565e9dec minor changes 2021-08-24 11:51:29 +03:00
831973fc8e better python compilation 2021-08-18 16:28:43 +03:00
902147b45b better structure of the python directory 2021-08-18 15:40:42 +03:00
9cc552409f rename the front-end Python module 2021-08-18 13:30:03 +03:00
66a790717a Optional check and update of numpy.i file if outdated 2021-08-10 15:43:24 +03:00
d0c19e0ce0 pytrexio build and pip install working 2021-08-05 17:55:34 +03:00
c381d5de4b Fixed compilation on macOS 2021-07-27 14:48:11 +02:00
ec0db01f0c Documentation in dist 2021-06-18 12:04:03 +02:00
8608e5d541 enable metadata I/O 2021-06-15 18:40:48 +02:00
ac45a937af Merge branch 'master' into add-strings 2021-06-15 11:49:42 +02:00
b92a15cce7 add top-level read/write functions for string arrays [fortran] 2021-06-15 10:20:01 +02:00
a39784dc51 adapt the generator to populate string attributes 2021-06-11 18:16:42 +02:00
b67d1c2cb2 adapt the generator for arrays of strings [text] 2021-06-11 14:45:42 +02:00
bec752361c Index OK 2021-06-10 01:49:43 +02:00
5abac3fec2 [WIP] working write dset of strings, but with memory leak [text] 2021-06-09 18:10:59 +02:00
3082dbbaf3 [WIP] adapt generator for string attributes [front,hdf5] 2021-06-04 15:36:18 +02:00
1647e76fcf [WIP] adapt generator for string datasets 2021-05-31 16:39:21 +02:00
7ddb9228f1 split dataset files in _str and _data groups 2021-05-27 15:03:13 +02:00
70531b0ff6 more general group_dset_h5_dtype variable in the templates [hdf5] 2021-05-27 13:59:45 +02:00
Evgeny Posenitskiy
29d927675e
Major refactoring of the generator script (#47)
* minor cleaning

* create functions for dictionary parsers in the external file

* remove files_exclude since post-processing does the job

* no need to have group_group_dset when propagatin dsets

* oneliner for paths to templates

* add dset_per_group dict

* add function to iteratively populate string based on triggers list

* added recursive replacer for numbers

* add recursive replaces for datasets

* add function for text groups  [iterative+recursive upd]

* do not define triggers in the master script

* transition to helper dictionaries

* cleaning

* comment main code blocks

* rearrange parameters

* add documentation strings to the functions

* minor cleaning and changes

* adapt build_trexio script

* add consisteny check for dimensioning variables
2021-05-26 19:11:46 +02:00
9ec75c2892 Added trex.org to generate json 2021-05-21 12:10:29 +02:00
6ffc4ccfb2 Fixed Fortran interface 2021-05-19 16:17:24 +02:00
0cc24bd21e error handling for trexio_text_deinit function 2021-05-19 15:03:15 +02:00
q-posev
07725b2a0a adapt generator for flexible default precisions 2021-05-18 11:47:46 +02:00
692f45ed7f Correct rank in Fortran interface 2021-05-08 00:35:53 +02:00
20d551a70b include inttypes to fix portability issues in text back end 2021-05-06 18:08:28 +02:00
d3b35ae453 discard portability patch 2021-05-06 09:35:48 +02:00
q-posev
113734db63 portability path for mac + fix missing numerical variables 2021-05-06 09:20:10 +02:00
f7dea1fd1c Fixed configure and install 2021-05-05 11:37:48 +02:00
9c2b240418 more portable HDF5 back end 2021-05-04 20:22:58 +02:00
e25f444b9b adapt build_trexio for new location of the generator 2021-04-30 14:26:56 +02:00
caee3576b7 move generator to tools directory 2021-04-30 14:22:32 +02:00
203e9027a6 fix paths 2021-04-30 14:12:23 +02:00
ed77a86215 add comments to build_trexio 2021-04-30 13:51:15 +02:00
faa936cc54 move build_trexio script to tools directory 2021-04-30 13:50:51 +02:00
Evgeny Posenitskiy
8defdaa0c0
org-mode to html conversion for the documentation website (#41)
* working static html doc website generated from org-mode files

* fix build_doc script

* add gitignore

* add gitignore

* clean html garbage

* documented hdf5

* documented text back end
2021-04-09 16:45:44 +02:00