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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-12-23 12:56:53 +01:00
Commit Graph

76 Commits

Author SHA1 Message Date
q-posev
3a7707ed86 Patch the generator 2022-04-12 00:44:53 +02:00
q-posev
a2fee3164b [WIP] text back end 2022-04-11 09:26:54 +02:00
68d34a0ace use built-in trexio_text_free_group function for garbage collection 2022-02-14 10:44:04 +01:00
q-posev
550cc73603 Fix portability issue with sed on MacOS 2022-01-26 14:00:05 +01:00
8c157454d3 [WIP] add delete_group functions to the generator 2022-01-24 10:10:45 +01:00
Pablo Lopez Rios
9e5d81b292 Use c_int64_t and c_int32_t as requested by Evgeny Posenitskiy. 2022-01-19 10:23:11 +00:00
Pablo Lopez Rios
0e9b9f1900 trexio_f: fix complaints from gfortran 11, including data type issues
This includes:
* Define kind of arguments of bind(C) procedures using the relevant C
  types provided by iso_c_binding.
* Replaced "call exit(1)" with "error stop 1".
* Fixed a couple of implicit type conversions between 4-/8-byte
  integers.

The first two fix compilation of the Fortran module with -std=f2008.
2022-01-18 16:58:07 +00:00
Evgeny Posenitskiy
dcb976010f
Automate build and upload of CPython wheels (#72)
* use PyPA build package to produce wheels

* update the Makefile and install_pytrexio to use PyPA build package

* remove MacOS-11 from runners

* [MacOS] portable expression for FreeBSD sed

* disable usage of NUMPY_INCLUDEDIR env variable

* activate PyPI upload and disable TestPyPI
2022-01-07 18:47:23 +01:00
2639b76a6e optimize storage of indices depending on the size_max variable [TEXT] 2021-12-17 15:32:03 +01:00
2e99a14b6e read dim variable of sparse dset to compress storage of indices in HDF5 2021-12-14 18:03:51 +01:00
32192f53aa fix bug in the generation of n-index functions for TEXT 2021-12-10 16:12:19 +01:00
e3a1e51702 better detailed dict 2021-12-09 16:15:17 +01:00
c17297ca1d fix generator for single floats 2021-12-09 09:48:55 +01:00
fcf84ebb8c Merge branch 'add-sparse-datasets' of github.com:TREX-CoE/trexio into add-sparse-datasets 2021-12-09 09:28:27 +01:00
d001844c2f [WIP] working write_ for chunked extensible (sparse) datasets 2021-12-08 17:26:55 +01:00
61ea409c58 Modified density matrices 2021-12-08 12:28:37 +01:00
bf5c651220 refactor to set common dtype substitutions in a function 2021-12-07 10:14:27 +01:00
e340c6541d adapt the generator to work for an arbitrary number of indices in sparse dset 2021-12-03 16:56:45 +01:00
ed3bde973e [WIP] more general templated variables for sparse data
+ renamed templated variables with std_dtype_in|out suffix into _format_scanf|printf for clarity
2021-12-03 15:42:40 +01:00
83c926fd6b replace offset_data arg with pointer arithmetics 2021-12-01 09:56:31 +01:00
d3ba8f3652 [WIP] working generator for sparse functions
+ remove trailing whitespaces
2021-11-30 16:30:36 +01:00
d44883f0ea add search bar
close #40
2021-11-19 12:50:12 +01:00
ae753108ff move FindTREXIO and cmake_uninstall modules in cmake directory 2021-11-17 11:02:35 +01:00
6feef1cd5f add custom uninstall target to CMake 2021-11-16 18:10:36 +01:00
f389ba2952 [WIP] better FindTREXIO module (following FindSDL2 example) 2021-11-16 11:37:11 +01:00
7fa07bf7e7 [WIP] working Guix project config file
TODO: implement possibility to build from the GitHub repo OR without hdf5
2021-11-12 17:00:04 +01:00
320697ee8d [WIP] FindTREXIO.cmake file 2021-11-09 16:52:43 +01:00
4b225f142e explicitly define HAVE_HDF5 in trexio.h for Python builds 2021-11-01 11:58:04 +01:00
9f2b4b9075 Remove warning when tangling 2021-10-06 10:31:06 +02:00
72c8d01f34 adapt consistency check of array dimensions for dim type 2021-09-22 11:23:17 +02:00
0167a53d50 add dim type for dimensioning variables in the trex.json 2021-09-22 10:56:25 +02:00
11a17c65d3 add attr_ prefix to the template file name for numerical attributes 2021-09-21 10:41:37 +02:00
c22e9d2925 put back sanity check that dimensioning variables are positive 2021-09-20 17:00:05 +02:00
2497a80f90 adapt triggers in the generator_tools 2021-09-20 15:51:57 +02:00
261e7c8b84 modify front end for more general numerical attributes 2021-09-20 13:16:44 +02:00
b1f1aee7ab Merge branch 'master' into swig-python 2021-09-10 14:04:15 +02:00
04529823f6 add README file for the Python API 2021-09-08 19:34:16 +02:00
fdc9a975b9 add empty line between function headers 2021-08-30 12:52:36 +03:00
4c28a4cac8 add type converters for numerical arrays in read/write Python functions 2021-08-26 13:14:46 +03:00
d4badd0cf4 Fix build issues on OLYMPE 2021-08-25 16:49:27 +03:00
c7565e9dec minor changes 2021-08-24 11:51:29 +03:00
831973fc8e better python compilation 2021-08-18 16:28:43 +03:00
902147b45b better structure of the python directory 2021-08-18 15:40:42 +03:00
9cc552409f rename the front-end Python module 2021-08-18 13:30:03 +03:00
66a790717a Optional check and update of numpy.i file if outdated 2021-08-10 15:43:24 +03:00
d0c19e0ce0 pytrexio build and pip install working 2021-08-05 17:55:34 +03:00
c381d5de4b Fixed compilation on macOS 2021-07-27 14:48:11 +02:00
ec0db01f0c Documentation in dist 2021-06-18 12:04:03 +02:00
8608e5d541 enable metadata I/O 2021-06-15 18:40:48 +02:00
ac45a937af Merge branch 'master' into add-strings 2021-06-15 11:49:42 +02:00