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mirror of https://github.com/TREX-CoE/trexio.git synced 2024-11-03 20:54:07 +01:00
Commit Graph

1150 Commits

Author SHA1 Message Date
ebc7aa5d40 dummy generator for auxiliary files 2021-03-09 11:58:47 +01:00
ac58337ee1
Merge pull request #23 from TREX-CoE/change-h5rw-num
new read/write for numerical attributes
2021-03-06 10:31:40 +01:00
9b54f71f4a initial generator 2021-03-05 16:50:44 +01:00
30927be21d initial templator 2021-03-05 16:50:26 +01:00
3110a35562 new read/write for numerical attributes 2021-03-05 15:49:05 +01:00
Evgeny Posenitskiy
e88a228bb5
Merge pull request #22 from TREX-CoE/change_h5rw_datasets
hdf5_read/write_dset decoupled from the parent group
2021-03-05 08:59:44 +01:00
Evgeny Posenitskiy
b964b73bbe
removed bracket 2021-03-04 20:43:44 +01:00
Evgeny Posenitskiy
e624be1435
Merge branch 'master' into change_h5rw_datasets 2021-03-04 20:21:08 +01:00
1df9cd7177 uint32 rank and better error handling 2021-03-04 19:39:06 +01:00
05d55028c4 add error codes for invalid returns 2021-03-04 19:36:32 +01:00
db1f1d6980 fix leaking memory 2021-03-04 18:53:13 +01:00
e52cfbafea dummy write and smart read 2021-03-04 15:02:23 +01:00
aee737fa23 provide dimensions and decouple dataset read/write from parent group 2021-03-04 14:03:34 +01:00
88d2808200 missing mode in rdm 2021-03-04 14:00:56 +01:00
Evgeny Posenitskiy
aa5dd6ea83
Merge pull request #21 from TREX-CoE/correct-append
Correct append on non-existing file
2021-03-04 09:45:00 +01:00
a3e2a3920d modify the test to fail when appending on non-existing file 2021-03-04 09:41:27 +01:00
9494f02e37 append on non-existing file should fail 2021-03-04 09:41:00 +01:00
Evgeny Posenitskiy
0328564967
Merge pull request #20 from TREX-CoE/file-locking
Locking asked from the front to the back
2021-03-04 09:27:15 +01:00
3ac1f8f135 Locking asked from the front to the back 2021-03-03 19:20:01 +01:00
d2efb67a9d stupid but working implementation of read/write_dset decoupled from read_group 2021-03-03 15:59:30 +01:00
a9a00e8bec make consistent with _hdf5.org file 2021-03-03 13:33:15 +01:00
Evgeny Posenitskiy
563d395d24
Merge pull request #15 from TREX-CoE/append_mode
Append mode for trexio_open; fixes #13
2021-03-03 13:21:18 +01:00
b8c569f9a3 add test to read/append non-existing files 2021-03-03 13:19:47 +01:00
c370434dcf add append mode to front end 2021-03-03 11:50:04 +01:00
ccf03370f7 add test for append in h5 2021-03-03 11:49:42 +01:00
886a3d2162 working append mode for hdf5 2021-03-03 11:49:21 +01:00
Evgeny Posenitskiy
d3f2fd6263
Merge pull request #14 from TREX-CoE/text
Rewrote text back end
Split org file
2021-03-03 10:13:02 +01:00
997bc92f52 Forgot org files 2021-03-03 10:09:50 +01:00
d4b2ff5c6e Rewrote text back end 2021-03-03 02:28:00 +01:00
Evgeny Posenitskiy
f0bc65555f
Merge pull request #12 from TREX-CoE/change-trex-json
Change trex json
2021-03-02 16:54:38 +01:00
27f9724772 correct (non)local_n_max naming 2021-03-02 16:52:05 +01:00
b798205974 add num_ prefix to (non)local_n_max 2021-03-02 16:46:20 +01:00
0f79754e9f typos and commas 2021-03-02 16:43:02 +01:00
cd7f5f53ed
Update README.md 2021-03-02 14:30:46 +01:00
49a73b6d75 Renamed trio in trexio 2021-03-02 13:57:01 +01:00
c58231e135 Added trex.config in JSON format.
Closes #1
2021-03-02 13:04:13 +01:00
Evgeny Posenitskiy
c3fd60fd6d
Merge pull request #11 from TREX-CoE/consecutive-test
consecutive testing for hdf5; fixes #10
2021-03-02 11:45:22 +01:00
a0172e26c1 consecutive testing for hdf5 2021-03-02 11:41:25 +01:00
cbb936564e added write_h5 test 2021-03-02 11:27:09 +01:00
Evgeny Posenitskiy
ff28a435d9
Merge pull request #2 from TREX-CoE/hdf5-backend
HDF5 backend
2021-03-02 11:04:01 +01:00
Evgeny Posenitskiy
2b228915ac
Merge branch 'master' into hdf5-backend 2021-03-02 11:03:15 +01:00
9cf8d26110 hdf5 backend working 2021-03-02 10:55:13 +01:00
472dd5fd91 add test to read nucleus_coord from hdf5 2021-02-23 18:20:14 +01:00
92f6a8fa81 replaced some ints with unsigned ints 2021-02-23 18:18:20 +01:00
29b4e4d313 WIP: hdf5: read_nucleus_coord works 2021-02-23 18:17:14 +01:00
ac9e1aa410 change int64 to uint64 2021-02-22 11:40:13 +01:00
258266004b TODO in org file 2021-02-22 10:56:16 +01:00
0c60cf78d9 Example works with no memory leaks 2021-02-20 18:16:10 +01:00
43bbcfcdbf Library compiles 2021-02-20 17:12:38 +01:00
Evgeny P
d56de54275
Initial commit 2021-01-18 15:48:36 +01:00