1
0
mirror of https://github.com/TREX-CoE/trexio.git synced 2024-11-04 21:24:08 +01:00
Commit Graph

68 Commits

Author SHA1 Message Date
2ce3f09c7f return --force-reinstall option to manual Python installation 2022-01-19 14:09:28 +01:00
e9db0c66d4 add tests 2022-01-19 14:08:38 +01:00
e4073d0a8c add PyPI version badge to README 2022-01-17 19:14:58 +01:00
Evgeny Posenitskiy
dcb976010f
Automate build and upload of CPython wheels (#72)
* use PyPA build package to produce wheels

* update the Makefile and install_pytrexio to use PyPA build package

* remove MacOS-11 from runners

* [MacOS] portable expression for FreeBSD sed

* disable usage of NUMPY_INCLUDEDIR env variable

* activate PyPI upload and disable TestPyPI
2022-01-07 18:47:23 +01:00
f1e3d34ea4 [wheel build] test GitHub actions 2022-01-07 11:03:00 +01:00
1a5babd403 incorporate changes from the stand-alone trexio-pypi-test repo 2022-01-07 10:25:09 +01:00
fc08ee68ef Merge branch 'master' of github.com:TREX-CoE/trexio 2022-01-05 14:05:25 +01:00
6ab5c67ebe [pre-release] upgrade versions and produce wheels for CPython 3.10 2021-12-27 16:26:17 +01:00
0cadb4ea0b add the tests for the top-level Python API of sparse data 2021-12-27 14:02:58 +01:00
c92cae947f [WIP] adapt the test of the low-level (pytrexio) API for sparse data 2021-12-24 11:51:06 +01:00
72897e4b5d [WIP] read/write of sparse data in Python 2021-12-23 18:27:24 +01:00
6cf6121f50 fix pytrexio test 2021-11-02 10:30:35 +01:00
7459589701 adapt the tests to use basis_shell_num 2021-10-21 15:52:12 +02:00
64b3e25da5 fix Python tests for basis_nucleus_index 2021-10-19 10:43:00 +02:00
5756b5df33 upgrade major versions due to changes in basis and ECP formats
needed to indicate that the backward copatibility will be broken
2021-10-19 10:24:44 +02:00
aadaf2db8d better README 2021-10-07 14:06:56 +02:00
q-posev
01e4476c19 minor update for better Python builds 2021-10-01 10:48:13 +02:00
6262fd6e9f pin numpy versions to avoid RuntimeError when importing trexio 2021-09-30 17:23:43 +02:00
Evgeny Posenitskiy
1ba0876d81
Merge pull request #60 from TREX-CoE/exit-code-for-open
Return error code from trexio_open
2021-09-24 12:45:37 +02:00
b5d513ae36 update the latest commit of trexio-tutorials submodule 2021-09-24 10:05:07 +02:00
67b00efa9c handle return error of trexio_open in the Python API 2021-09-22 16:40:55 +02:00
264faf9c74 adapt MANIFEST.in to the structure of examples directory 2021-09-14 10:51:36 +02:00
e9c376c83b add trexio-tutorials repo as git submodule 2021-09-14 10:08:25 +02:00
8917cb747b better README 2021-09-14 09:48:55 +02:00
71f4006987 better README + Binder badge 2021-09-13 17:21:34 +02:00
1589995775 do not use warnings for an attempt to overwrite in the Python API 2021-09-13 11:46:31 +02:00
2bd4ef9bfd add has_ functions to the Python API 2021-09-13 11:29:00 +02:00
77e3f1ac11 print UserWarning instead of raising Error for an attempt to overwrite data
following suggestion of Vijay G.C.
2021-09-12 14:24:50 +02:00
97f1d3b723 better documentation 2021-09-12 12:27:08 +02:00
ab3f56c023 remove jupyter from requirements.txt 2021-09-10 14:02:10 +02:00
q-posev
39c7587b5e more portable setup of environment variables for install_pytrexio.sh 2021-09-10 13:36:51 +02:00
dcfe1da870 better documentation 2021-09-09 17:29:17 +02:00
569fac5578 move set_NUMPY_INCLUDEDIR into tools directory 2021-09-09 17:28:37 +02:00
b9c3ddb30e FIX: bug related to import numpy in setup.py script
use the custom NUMPY_INCLUDEDIR environment variable derived from a call to numpy.get_include
2021-09-09 15:09:26 +02:00
58b611e21b add setuptools and jupyter to requirements.txt 2021-09-09 15:08:01 +02:00
09937c58c5 better README 2021-09-09 15:06:26 +02:00
a8d14f4c79 better README for python 2021-09-08 19:53:45 +02:00
04529823f6 add README file for the Python API 2021-09-08 19:34:16 +02:00
04a713590a FIX bug due to the direct import of numpy in the setup script
+ add more classifiers
2021-09-08 19:26:30 +02:00
f24a274c4d add requirements file with packages needed for a proper setup 2021-09-07 17:32:23 +02:00
e72fbb4645 minor fixed in setup script to be compatible with Docker containers
+ replaced dependency on h5py with numpy
2021-09-07 17:31:25 +02:00
96678fea2e adapt write functions to receive multidimensional arrays or lists 2021-09-07 17:14:23 +02:00
ced8210ff0 BUG: trexio_open fails when test script is executed from outside the root test directory 2021-08-30 18:23:24 +03:00
ad44e29e95 fix bug with Python version import 2021-08-30 15:08:26 +03:00
cf51d3971f read module version from _version.py file 2021-08-30 13:46:11 +03:00
b8aff45d3b add notes on Python build and installation issues 2021-08-27 16:14:33 +03:00
5a2b4d96a7 reshape output arrays by default when reading from the file 2021-08-27 16:08:39 +03:00
7b5ebf6272 implement TREXIO File class and change import of pytrexio module 2021-08-26 17:01:53 +03:00
4c28a4cac8 add type converters for numerical arrays in read/write Python functions 2021-08-26 13:14:46 +03:00
2911e91941 make dim an optional argument in read_ functions
if dim is None - the function read all necessary dimensions from the TREXIO file
2021-08-24 12:51:43 +03:00