mirror of
https://github.com/TREX-CoE/trexio.git
synced 2024-12-23 04:43:57 +01:00
dummy generator for auxiliary files
This commit is contained in:
parent
9b54f71f4a
commit
ebc7aa5d40
@ -1,6 +1,9 @@
|
|||||||
import json
|
import json
|
||||||
|
|
||||||
with open('trex.json', 'r') as f:
|
from os import listdir
|
||||||
|
from os.path import isfile, join
|
||||||
|
|
||||||
|
with open('../trex.json', 'r') as f:
|
||||||
config0 = json.load(f)
|
config0 = json.load(f)
|
||||||
|
|
||||||
print('Metadata I/O currently not supported')
|
print('Metadata I/O currently not supported')
|
||||||
@ -9,23 +12,31 @@ del config0['metadata']
|
|||||||
|
|
||||||
config = {}
|
config = {}
|
||||||
for k,v in config0.items():
|
for k,v in config0.items():
|
||||||
if k == 'nucleus' or k == 'electron':
|
if k == 'nucleus' or k == 'ecp':
|
||||||
config[k] = v
|
config[k] = v
|
||||||
|
|
||||||
print(config)
|
#print(config)
|
||||||
|
|
||||||
groups = [group for group in config.keys()]
|
groups = [group for group in config.keys()]
|
||||||
|
|
||||||
dim_variables = {}
|
dim_variables = {}
|
||||||
dim_list = []
|
dim_list = []
|
||||||
|
dim_dict = {}
|
||||||
for k1,v1 in config.items():
|
for k1,v1 in config.items():
|
||||||
|
grname = k1
|
||||||
for v2 in v1.values():
|
for v2 in v1.values():
|
||||||
for dim in v2[1]:
|
for dim in v2[1]:
|
||||||
if not dim.isdigit():
|
if not dim.isdigit():
|
||||||
tmp = dim.replace('.','_')
|
tmp = dim.replace('.','_')
|
||||||
dim_variables[tmp] = 0
|
dim_variables[tmp] = 0
|
||||||
if dim not in dim_list:
|
if dim not in dim_list:
|
||||||
dim_list.append(dim)
|
dim_list.append(tmp)
|
||||||
|
|
||||||
|
dim_dict[grname] = dim_list
|
||||||
|
dim_list = []
|
||||||
|
|
||||||
|
print(dim_variables)
|
||||||
|
#print(dim_dict)
|
||||||
|
|
||||||
datasets = {}
|
datasets = {}
|
||||||
numbers = {}
|
numbers = {}
|
||||||
@ -46,30 +57,65 @@ for k,v in datasets.items():
|
|||||||
datasets_nostr[k] = v
|
datasets_nostr[k] = v
|
||||||
|
|
||||||
#print(datasets_nostr)
|
#print(datasets_nostr)
|
||||||
print(numbers)
|
#print(numbers)
|
||||||
|
|
||||||
#print(attributes)
|
#print(attributes)
|
||||||
#print(groups)
|
#print(groups)
|
||||||
|
|
||||||
file_list = ['temp_trexio_hdf5.c']
|
#file_list = ['temp_trexio_hdf5.c']
|
||||||
path = 'src/templates'
|
file_list = []
|
||||||
for fname in file_list:
|
|
||||||
fname_new = fname.replace('temp_','')
|
temp_path = 'templates_hdf5'
|
||||||
with open(f'{path}/{fname}', 'r') as f_in:
|
|
||||||
with open(f'{path}/{fname_new}', 'w') as f_out:
|
files_exclude = ['prefix_hdf5.c', 'prefix_hdf5.h', 'suffix_hdf5.h', 'templator_hdf5.org']
|
||||||
isfunc = False
|
|
||||||
|
files = [f for f in listdir(temp_path) if isfile(join(temp_path, f)) and f not in files_exclude]
|
||||||
|
#print(files)
|
||||||
|
|
||||||
|
files_funcs = [f for f in files if 'read_' in f or 'write_' in f or 'rw_' in f ]
|
||||||
|
files_auxil = [f for f in files if not ('read_' in f or 'write_' in f or 'rw_' in f)]
|
||||||
|
print(files_auxil)
|
||||||
|
|
||||||
|
# build files with $group$ only
|
||||||
|
for fname in ['basic_hdf5.c', 'struct_hdf5.h']:
|
||||||
|
fname_new = 'populated/pop_' + fname
|
||||||
|
with open(f'{temp_path}/{fname}', 'r') as f_in:
|
||||||
|
with open(f'{temp_path}/{fname_new}', 'w') as f_out:
|
||||||
for line in f_in:
|
for line in f_in:
|
||||||
if '$group$' in line and 'hdf5' in line:
|
|
||||||
# probably a good function criterion
|
|
||||||
isfunc = True
|
|
||||||
|
|
||||||
|
|
||||||
if '$group$' in line or '$GROUP$' in line:
|
if '$group$' in line or '$GROUP$' in line:
|
||||||
for group_name in config.keys():
|
for grname in config.keys():
|
||||||
templine = line.replace('$group$', f'{group_name}')
|
templine1 = line.replace('$group$', grname)
|
||||||
newline = templine.replace('$GROUP$', f'{group_name.upper()}')
|
templine2 = templine1.replace('$GROUP$', grname.upper())
|
||||||
|
#templine1 = templine2.replace('$GROUP_NUM$', dim.upper())
|
||||||
|
#templine2 = templine1.replace('$group_num$', dim)
|
||||||
|
#templine1 = templine2.replace('$GROUP_DSET$', '')
|
||||||
|
#templine2 = templine1.replace('$group_dset$', '')
|
||||||
|
|
||||||
f_out.write(newline)
|
f_out.write(templine2)
|
||||||
|
else:
|
||||||
|
f_out.write(line)
|
||||||
|
|
||||||
|
# build files with $group$ and $group$-based
|
||||||
|
for fname in ['def_hdf5.c'] :
|
||||||
|
fname_new = 'populated/pop_' + fname
|
||||||
|
with open(f'{temp_path}/{fname}', 'r') as f_in :
|
||||||
|
with open(f'{temp_path}/{fname_new}', 'w') as f_out :
|
||||||
|
for line in f_in :
|
||||||
|
if '$group_dset$' in line or '$GROUP_DSET$' in line :
|
||||||
|
for dset in datasets_nostr.keys():
|
||||||
|
templine1 = line.replace('$GROUP$_$GROUP_DSET$', dset.upper())
|
||||||
|
templine2 = templine1.replace('$group_dset$', dset)
|
||||||
|
f_out.write(templine2)
|
||||||
|
elif '$group_num$' in line or '$GROUP_NUM$' in line :
|
||||||
|
for num in dim_variables.keys():
|
||||||
|
templine1 = line.replace('$GROUP_NUM$', num.upper())
|
||||||
|
templine2 = templine1.replace('$group_num$', num)
|
||||||
|
f_out.write(templine2)
|
||||||
|
elif '$group$' in line or '$GROUP$' in line :
|
||||||
|
for grname in config.keys():
|
||||||
|
templine1 = line.replace('$group$', grname)
|
||||||
|
templine2 = templine1.replace('$GROUP$', grname.upper())
|
||||||
|
f_out.write(templine2)
|
||||||
else:
|
else:
|
||||||
f_out.write(line)
|
f_out.write(line)
|
||||||
|
|
||||||
|
@ -157,7 +157,7 @@ trexio_exit_code trexio_hdf5_write_$group_num$(const trexio_t* file, const uint6
|
|||||||
#+end_src
|
#+end_src
|
||||||
|
|
||||||
|
|
||||||
#+begin_src c :tangle rw_num_hdf5.c
|
#+begin_src c :tangle read_num_hdf5.c
|
||||||
trexio_exit_code trexio_hdf5_read_$group_num$const trexio_t* file, uint64_t* num) {
|
trexio_exit_code trexio_hdf5_read_$group_num$const trexio_t* file, uint64_t* num) {
|
||||||
|
|
||||||
assert (file != NULL);
|
assert (file != NULL);
|
||||||
@ -176,8 +176,10 @@ trexio_exit_code trexio_hdf5_read_$group_num$const trexio_t* file, uint64_t* num
|
|||||||
|
|
||||||
return TREXIO_SUCCESS;
|
return TREXIO_SUCCESS;
|
||||||
}
|
}
|
||||||
|
#+end_src
|
||||||
|
|
||||||
|
|
||||||
|
#+begin_src c :tangle write_num_hdf5.c
|
||||||
trexio_exit_code trexio_hdf5_write_$group_num$(const trexio_t* file, const uint64_t num) {
|
trexio_exit_code trexio_hdf5_write_$group_num$(const trexio_t* file, const uint64_t num) {
|
||||||
|
|
||||||
assert (file != NULL);
|
assert (file != NULL);
|
||||||
@ -244,7 +246,7 @@ trexio_exit_code trexio_hdf5_read_$group$_$group_dset$(const trexio_t* file, dou
|
|||||||
trexio_exit_code trexio_hdf5_write_$group$_$group_dset$(const trexio_t* file, const double* $group_dset$, const uint32_t rank, const uint64_t* dims);
|
trexio_exit_code trexio_hdf5_write_$group$_$group_dset$(const trexio_t* file, const double* $group_dset$, const uint32_t rank, const uint64_t* dims);
|
||||||
#+end_src
|
#+end_src
|
||||||
|
|
||||||
#+begin_src c :tangle rw_dset_hdf5.c
|
#+begin_src c :tangle read_dset_hdf5.c
|
||||||
trexio_exit_code trexio_hdf5_read_$group$_$group_dset$(const trexio_t* file, $group_dset_dtype$* $group_dset$, const uint32_t rank, const uint64_t* dims) {
|
trexio_exit_code trexio_hdf5_read_$group$_$group_dset$(const trexio_t* file, $group_dset_dtype$* $group_dset$, const uint32_t rank, const uint64_t* dims) {
|
||||||
|
|
||||||
assert (file != NULL);
|
assert (file != NULL);
|
||||||
@ -296,7 +298,9 @@ trexio_exit_code trexio_hdf5_read_$group$_$group_dset$(const trexio_t* file, $gr
|
|||||||
return TREXIO_SUCCESS;
|
return TREXIO_SUCCESS;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
#+end_src
|
||||||
|
|
||||||
|
#+begin_src c :tangle write_dset_hdf5.c
|
||||||
trexio_exit_code trexio_hdf5_write_$group$_$group_dset$(const trexio_t* file, const $group_dset_dtype$* $group_dset$, const uint32_t rank, const uint64_t* dims) {
|
trexio_exit_code trexio_hdf5_write_$group$_$group_dset$(const trexio_t* file, const $group_dset_dtype$* $group_dset$, const uint32_t rank, const uint64_t* dims) {
|
||||||
|
|
||||||
assert (file != NULL);
|
assert (file != NULL);
|
||||||
@ -330,8 +334,6 @@ trexio_exit_code trexio_hdf5_write_$group$_$group_dset$(const trexio_t* file, co
|
|||||||
|
|
||||||
return TREXIO_SUCCESS;
|
return TREXIO_SUCCESS;
|
||||||
}
|
}
|
||||||
|
|
||||||
#+end_src
|
|
||||||
#+end_src
|
#+end_src
|
||||||
|
|
||||||
|
|
||||||
|
Loading…
Reference in New Issue
Block a user