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Merge branch 'master' into add-determinants

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q-posev 2022-04-15 15:32:45 +02:00
commit d07cc9793c
2 changed files with 68 additions and 55 deletions
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113
src/templates_front/templator_front.org
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@ -158,43 +158,44 @@ __trexio_path__ = None
** Error handling
#+NAME: table-exit-codes
| Macro | Code | Description |
|------------------------------+------+----------------------------------------|
| ~TREXIO_FAILURE~ | -1 | 'Unknown failure' |
| ~TREXIO_SUCCESS~ | 0 | 'Success' |
| ~TREXIO_INVALID_ARG_1~ | 1 | 'Invalid argument 1' |
| ~TREXIO_INVALID_ARG_2~ | 2 | 'Invalid argument 2' |
| ~TREXIO_INVALID_ARG_3~ | 3 | 'Invalid argument 3' |
| ~TREXIO_INVALID_ARG_4~ | 4 | 'Invalid argument 4' |
| ~TREXIO_INVALID_ARG_5~ | 5 | 'Invalid argument 5' |
| ~TREXIO_END~ | 6 | 'End of file' |
| ~TREXIO_READONLY~ | 7 | 'Read-only file' |
| ~TREXIO_ERRNO~ | 8 | strerror(errno) |
| ~TREXIO_INVALID_ID~ | 9 | 'Invalid ID' |
| ~TREXIO_ALLOCATION_FAILED~ | 10 | 'Allocation failed' |
| ~TREXIO_HAS_NOT~ | 11 | 'Element absent' |
| ~TREXIO_INVALID_NUM~ | 12 | 'Invalid (negative or 0) dimension' |
| ~TREXIO_ATTR_ALREADY_EXISTS~ | 13 | 'Attribute already exists' |
| ~TREXIO_DSET_ALREADY_EXISTS~ | 14 | 'Dataset already exists' |
| ~TREXIO_OPEN_ERROR~ | 15 | 'Error opening file' |
| ~TREXIO_LOCK_ERROR~ | 16 | 'Error locking file' |
| ~TREXIO_UNLOCK_ERROR~ | 17 | 'Error unlocking file' |
| ~TREXIO_FILE_ERROR~ | 18 | 'Invalid file' |
| ~TREXIO_GROUP_READ_ERROR~ | 19 | 'Error reading group' |
| ~TREXIO_GROUP_WRITE_ERROR~ | 20 | 'Error writing group' |
| ~TREXIO_ELEM_READ_ERROR~ | 21 | 'Error reading element' |
| ~TREXIO_ELEM_WRITE_ERROR~ | 22 | 'Error writing element' |
| ~TREXIO_UNSAFE_ARRAY_DIM~ | 23 | 'Access to memory beyond allocated' |
| ~TREXIO_ATTR_MISSING~ | 24 | 'Attribute does not exist in the file' |
| ~TREXIO_DSET_MISSING~ | 25 | 'Dataset does not exist in the file' |
| ~TREXIO_BACK_END_MISSING~ | 26 | 'Requested back end is disabled' |
| ~TREXIO_INVALID_ARG_6~ | 27 | 'Invalid argument 6' |
| ~TREXIO_INVALID_ARG_7~ | 28 | 'Invalid argument 7' |
| ~TREXIO_INVALID_ARG_8~ | 29 | 'Invalid argument 8' |
| ~TREXIO_INVALID_STR_LEN~ | 30 | 'Invalid max_str_len' |
| ~TREXIO_INT_SIZE_OVERFLOW~ | 31 | 'Possible integer overflow' |
| ~TREXIO_SAFE_MODE~ | 32 | 'Unsafe operation in safe mode' |
| ~TREXIO_INVALID_STATE~ | 33 | 'Inconsistent state of the file' |
| Macro | Code | Description |
|-------------------------------+------+----------------------------------------|
| ~TREXIO_FAILURE~ | -1 | 'Unknown failure' |
| ~TREXIO_SUCCESS~ | 0 | 'Success' |
| ~TREXIO_INVALID_ARG_1~ | 1 | 'Invalid argument 1' |
| ~TREXIO_INVALID_ARG_2~ | 2 | 'Invalid argument 2' |
| ~TREXIO_INVALID_ARG_3~ | 3 | 'Invalid argument 3' |
| ~TREXIO_INVALID_ARG_4~ | 4 | 'Invalid argument 4' |
| ~TREXIO_INVALID_ARG_5~ | 5 | 'Invalid argument 5' |
| ~TREXIO_END~ | 6 | 'End of file' |
| ~TREXIO_READONLY~ | 7 | 'Read-only file' |
| ~TREXIO_ERRNO~ | 8 | strerror(errno) |
| ~TREXIO_INVALID_ID~ | 9 | 'Invalid ID' |
| ~TREXIO_ALLOCATION_FAILED~ | 10 | 'Allocation failed' |
| ~TREXIO_HAS_NOT~ | 11 | 'Element absent' |
| ~TREXIO_INVALID_NUM~ | 12 | 'Invalid (negative or 0) dimension' |
| ~TREXIO_ATTR_ALREADY_EXISTS~ | 13 | 'Attribute already exists' |
| ~TREXIO_DSET_ALREADY_EXISTS~ | 14 | 'Dataset already exists' |
| ~TREXIO_OPEN_ERROR~ | 15 | 'Error opening file' |
| ~TREXIO_LOCK_ERROR~ | 16 | 'Error locking file' |
| ~TREXIO_UNLOCK_ERROR~ | 17 | 'Error unlocking file' |
| ~TREXIO_FILE_ERROR~ | 18 | 'Invalid file' |
| ~TREXIO_GROUP_READ_ERROR~ | 19 | 'Error reading group' |
| ~TREXIO_GROUP_WRITE_ERROR~ | 20 | 'Error writing group' |
| ~TREXIO_ELEM_READ_ERROR~ | 21 | 'Error reading element' |
| ~TREXIO_ELEM_WRITE_ERROR~ | 22 | 'Error writing element' |
| ~TREXIO_UNSAFE_ARRAY_DIM~ | 23 | 'Access to memory beyond allocated' |
| ~TREXIO_ATTR_MISSING~ | 24 | 'Attribute does not exist in the file' |
| ~TREXIO_DSET_MISSING~ | 25 | 'Dataset does not exist in the file' |
| ~TREXIO_BACK_END_MISSING~ | 26 | 'Requested back end is disabled' |
| ~TREXIO_INVALID_ARG_6~ | 27 | 'Invalid argument 6' |
| ~TREXIO_INVALID_ARG_7~ | 28 | 'Invalid argument 7' |
| ~TREXIO_INVALID_ARG_8~ | 29 | 'Invalid argument 8' |
| ~TREXIO_INVALID_STR_LEN~ | 30 | 'Invalid max_str_len' |
| ~TREXIO_INT_SIZE_OVERFLOW~ | 31 | 'Possible integer overflow' |
| ~TREXIO_SAFE_MODE~ | 32 | 'Unsafe operation in safe mode' |
| ~TREXIO_INVALID_ELECTRON_NUM~ | 33 | 'Inconsistent value of electron num' |
| ~TREXIO_INVALID_STATE~ | 34 | 'Inconsistent state of the file' |
# We need to force Emacs not to indent the Python code:
# -*- org-src-preserve-indentation: t
@ -274,7 +275,8 @@ return '\n'.join(result)
#define TREXIO_INVALID_STR_LEN ((trexio_exit_code) 30)
#define TREXIO_INT_SIZE_OVERFLOW ((trexio_exit_code) 31)
#define TREXIO_SAFE_MODE ((trexio_exit_code) 32)
#define TREXIO_INVALID_STATE ((trexio_exit_code) 33)
#define TREXIO_INVALID_ELECTRON_NUM ((trexio_exit_code) 33)
#define TREXIO_INVALID_STATE ((trexio_exit_code) 34)
#+end_src
#+begin_src f90 :tangle prefix_fortran.f90 :exports none
@ -312,7 +314,8 @@ return '\n'.join(result)
integer(trexio_exit_code), parameter :: TREXIO_INVALID_STR_LEN = 30
integer(trexio_exit_code), parameter :: TREXIO_INT_SIZE_OVERFLOW = 31
integer(trexio_exit_code), parameter :: TREXIO_SAFE_MODE = 32
integer(trexio_exit_code), parameter :: TREXIO_INVALID_STATE = 33
integer(trexio_exit_code), parameter :: TREXIO_INVALID_ELECTRON_NUM = 33
integer(trexio_exit_code), parameter :: TREXIO_INVALID_STATE = 34
#+end_src
#+begin_src python :tangle prefix_python.py :exports none
@ -351,7 +354,8 @@ return '\n'.join(result)
TREXIO_INVALID_STR_LEN = 30
TREXIO_INT_SIZE_OVERFLOW = 31
TREXIO_SAFE_MODE = 32
TREXIO_INVALID_STATE = 33
TREXIO_INVALID_ELECTRON_NUM = 33
TREXIO_INVALID_STATE = 34
#+end_src
:END:
@ -496,6 +500,9 @@ return '\n'.join(result)
case TREXIO_SAFE_MODE:
return "Unsafe operation in safe mode";
break;
case TREXIO_INVALID_ELECTRON_NUM:
return "Inconsistent value of electron num";
break;
case TREXIO_INVALID_STATE:
return "Inconsistent state of the file";
break;
@ -1262,7 +1269,7 @@ trexio_close (trexio_t* file)
assert(file->back_end < TREXIO_INVALID_BACK_END);
/* Things to be done before the closing the file in the back-end */
/* Things to be done before closing the file in the back-end */
rc = trexio_pre_close(file);
if (rc != TREXIO_SUCCESS) return rc;
@ -1521,14 +1528,15 @@ trexio_pre_close (trexio_t* file)
if (file == NULL) return TREXIO_FILE_ERROR;
{ /* Up-spin and down-spin electrons */
trexio_exit_code rc;
/* Up-spin and down-spin electrons */
trexio_exit_code rc;
int32_t nup, ndn, nelec;
bool has_up = (trexio_has_electron_up_num(file) == TREXIO_SUCCESS);
bool has_dn = (trexio_has_electron_dn_num(file) == TREXIO_SUCCESS);
bool has_updn = (trexio_has_electron_num(file) == TREXIO_SUCCESS);
int32_t nup, ndn, nelec;
bool has_up = (trexio_has_electron_up_num(file) == TREXIO_SUCCESS);
bool has_dn = (trexio_has_electron_dn_num(file) == TREXIO_SUCCESS);
bool has_updn = (trexio_has_electron_num(file) == TREXIO_SUCCESS);
if (file->mode != 'r') {
if (has_updn && has_up && has_dn) {
rc = trexio_read_electron_up_num(file, &nup);
if (rc != TREXIO_SUCCESS) return rc;
@ -1540,9 +1548,13 @@ trexio_pre_close (trexio_t* file)
if (rc != TREXIO_SUCCESS) return rc;
if (nelec != nup + ndn) {
nelec = nup + ndn;
rc = trexio_write_electron_num(file, nelec);
if (rc != TREXIO_SUCCESS) return rc;
if (file->mode == 'u') {
nelec = nup + ndn;
rc = trexio_write_electron_num(file, nelec);
if (rc != TREXIO_SUCCESS) return rc;
} else {
return TREXIO_INVALID_ELECTRON_NUM;
}
}
} else if (has_up && has_dn) {
rc = trexio_read_electron_up_num(file, &nup);
@ -1577,7 +1589,6 @@ trexio_pre_close (trexio_t* file)
rc = trexio_write_electron_num(file, nelec);
if (rc != TREXIO_SUCCESS) return rc;
}
}
return TREXIO_SUCCESS;

10
src/templates_hdf5/templator_hdf5.org
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@ -137,18 +137,20 @@ trexio_hdf5_init (trexio_t* const file)
/* Create or open groups in the hdf5 file assuming that they exist if file exists */
switch (file->mode) {
case 'r':
f->$group$_group = H5Gopen(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT);
if (H5Lexists(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT) > 0) f->$group$_group = H5Gopen(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT);
if (H5Lexists(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT) == 0) f->$group$_group = (hid_t) 0;
break;
case 'u':
case 'w':
if (f_exists == 1) {
f->$group$_group = H5Gopen(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT);
if (H5Lexists(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT) > 0) f->$group$_group = H5Gopen(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT);
if (H5Lexists(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT) == 0) f->$group$_group = H5Gcreate(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
} else {
f->$group$_group = H5Gcreate(f->file_id, $GROUP$_GROUP_NAME, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
}
break;
}
if (f->$group$_group <= 0L) return TREXIO_INVALID_ID;
if (f->$group$_group < (hid_t) 0) return TREXIO_INVALID_ID;
return TREXIO_SUCCESS;
}
@ -161,7 +163,7 @@ trexio_hdf5_deinit (trexio_t* const file)
trexio_hdf5_t* f = (trexio_hdf5_t*) file;
H5Gclose(f->$group$_group);
if (f->$group$_group != (hid_t) 0) H5Gclose(f->$group$_group);
f->$group$_group = 0;
H5Fclose(f->file_id);