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Merge pull request #84 from TREX-CoE/debian-packaging

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Debian packaging
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Anthony Scemama 2022-02-17 15:51:51 +01:00 committed by GitHub
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3
.gitignore vendored
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@ -41,3 +41,6 @@ trex.json
*~
.*.swp
/build*
# output of debian build (debuild)
libtrexio-*
libtrexio_*

21
Makefile.am
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@ -37,6 +37,7 @@ CLEANFILES = trexio.mod
BUILT_SOURCES = trexio.mod
EXTRA_DIST = .git_hash
PACKAGE_VERSION = @PACKAGE_VERSION@
SUBDIRS =
pkgconfigdir = $(libdir)/pkgconfig
@ -83,6 +84,26 @@ EXTRA_DIST += CMakeLists.txt \
cmake/cmake_uninstall.cmake.in \
cmake/FindTREXIO.cmake
# Include files needed to produce the debian package.
DEB_FILES = \
debian/changelog \
debian/compat \
debian/control \
debian/copyright \
debian/patches \
debian/README.Debian \
debian/README.md \
debian/rules \
debian/source \
debian/watch
EXTRA_DIST += $(DEB_FILES)
debian_from_dist: $(DEB_FILES) $(SOURCES) $(trexio_h)
cp ../trexio-$(PACKAGE_VERSION).tar.gz ../libtrexio_$(PACKAGE_VERSION).orig.tar.gz
debuild
# =============== TESTS =============== #
TESTS_C = \

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debian/README.Debian vendored Normal file
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libtrexio for Debian
libtrexio is an I/O library for quantum chemistry.
(Automatically generated by debmake Version 4.3.1)
-- Evgeny Posenitskiy <posenitskiy@irsamc.ups-tlse.fr> Wed, 16 Feb 2022 15:07:02 +0100

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# Debian packages from Autotools project
Following the [debian guide](https://www.debian.org/doc/manuals/debmake-doc/ch08.en.html#autotools-single).
## Requirements
- debmake
- debuild
- debhelper
- dh-autoreconf
## First release
1. Download and extract the Autotools-produced distribution tarball (e.g. `trexio-2.1.0.tar.gz`)
2. `cp trexio-2.1.0.tar.gz libtrexio_2.1.0.orig.tar.gz` --> important for step 4
3. `cd trexio-2.1.0`
4. `debmake`
This will create `debian` folder with some pre-filled templates, which have to be checked and modified
according to your project (e.g. prepend `lib` for library packages).
## Release updates
This relies on the previously created and modified templates in the `debian` directory.
1. `debuild` --> this creates the debian packages in the parent directory, i.e. one level higher than `trexio-2.1.0/` directory
2. `dpkg -f libtrexio_2.1.0-1_amd64.deb pre-depends depends recommends conflicts break`
**Note for maintainers:** to battle-test your build process, it can be a good idea to run `debuild` in a `chroot` environment
as opposed to the host. For example, `pbuilder` can be used to create an isolated `chroot`
and to build a debian package within it (see `pdebuild` wrapper command).
## Make
TREXIO supplies `make debian_from_dist` rule to produce a `libtrexio` debian package.
It relies on specifications in the `debian/` folder.
This rule should be executed in the source code distribution (extracted from the tarball) and **not in the GitHub repo clone**.
It also requires the tarball distribution (e.g. `trexio-2.1.0.tar.gz`) to be present in the **parent** directory.

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libtrexio (2.1.0-1) UNRELEASED; urgency=low
* Initial release.
-- Evgeny Posenitskiy <posenitskiy@irsamc.ups-tlse.fr> Wed, 16 Feb 2022 15:07:02 +0100

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11

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Source: libtrexio
Section: science
Priority: optional
Maintainer: Evgeny Posenitskiy <posenitskiy@irsamc.ups-tlse.fr>
Build-Depends: gfortran, pkg-config, libhdf5-dev, debhelper (>=11~), dh-autoreconf
Standards-Version: 4.1.4
Homepage: https://trex-coe.github.io/trexio/
Package: libtrexio
Architecture: any
Multi-Arch: foreign
Depends: ${misc:Depends}, ${shlibs:Depends}
Description: I/O library for quantum chemistry.
This Debian binary package was auto-generated by the
debmake(1) command provided by the debmake package.

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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: libtrexio
Source: <url://github.com/TREX-CoE/trexio>
#
# Please double check copyright with the licensecheck(1) command.
Files: .git_hash
AUTHORS
Makefile.am
CMakeLists.txt
NEWS
README
cmake/cmake_uninstall.cmake.in
cmake/FindTREXIO.cmake
configure.ac
docs/.htmlizer
docs/trexio.css
include/config.h.in
include/trexio.h
include/trexio_f.f90
pkgconfig/trexio.pc.in
src/CMakeLists.txt
src/trexio.c
src/trexio_hdf5.c
src/trexio_hdf5.h
src/trexio_private.h
src/trexio_s.h
src/trexio_text.c
src/trexio_text.h
tests/CMakeLists.txt
tests/io_all.c
tests/io_dset_float_hdf5.c
tests/io_dset_float_text.c
tests/io_dset_int_hdf5.c
tests/io_dset_int_text.c
tests/io_dset_sparse_hdf5.c
tests/io_dset_sparse_text.c
tests/io_dset_str_hdf5.c
tests/io_dset_str_text.c
tests/io_num_hdf5.c
tests/io_num_text.c
tests/io_safe_dset_float_hdf5.c
tests/io_safe_dset_float_text.c
tests/io_str_hdf5.c
tests/io_str_text.c
tests/open_hdf5.c
tests/open_text.c
tests/overwrite_all_hdf5.c
tests/overwrite_all_text.c
tests/test_f.f90
tests/trexio_f.f90
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#----------------------------------------------------------------------------
# xml and html files (skipped):
# docs/tutorial_benzene.html
# docs/index.html
# docs/examples.html
# docs/trex.html
# docs/templator_hdf5.html
# docs/templator_text.html
# docs/templator_front.html
# docs/README.html
#----------------------------------------------------------------------------
# Files marked as NO_LICENSE_TEXT_FOUND may be covered by the following
# license/copyright files.
#----------------------------------------------------------------------------
# License file: COPYING
BSD 3-Clause License
.
Copyright (c) 2021, TREX Center of Excellence
All rights reserved.
.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
.
1. Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
.
2. Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
.
3. Neither the name of the copyright holder nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

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# You must remove unused comment lines for the released package.

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debian/rules vendored Executable file
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#!/usr/bin/make -f
# You must remove unused comment lines for the released package.
#export DH_VERBOSE = 1
#export DEB_BUILD_MAINT_OPTIONS = hardening=+all
#export DEB_CFLAGS_MAINT_APPEND = -Wall -pedantic
#export DEB_LDFLAGS_MAINT_APPEND = -Wl,--as-needed
%:
dh $@ --with autoreconf

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3.0 (quilt)

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#abort-on-upstream-changes
#unapply-patches

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debian/watch vendored Normal file
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# You must remove unused comment lines for the released package.
version=3