1
0
mirror of https://github.com/TREX-CoE/trexio.git synced 2024-12-22 20:35:44 +01:00

handle return error of trexio_open in the Python API

This commit is contained in:
q-posev 2021-09-22 16:40:55 +02:00
parent 9457a826d2
commit 67b00efa9c
3 changed files with 31 additions and 6 deletions

View File

@ -49,7 +49,7 @@ nucleus_num = 12
try: try:
trexio.write_nucleus_num(test_file, -100) trexio.write_nucleus_num(test_file, -100)
except trexio.Error: except trexio.Error:
print("Writing negative nucleus_num: checked.") print("Raise error for an attempt to write negative nucleus_num: checked.")
# write nucleus_num in the file # write nucleus_num in the file
try: try:
@ -60,7 +60,7 @@ except:
try: try:
trexio.write_nucleus_num(test_file, nucleus_num*2) trexio.write_nucleus_num(test_file, nucleus_num*2)
except trexio.Error: except trexio.Error:
print("Attempt to overwrite nucleus_num: checked.") print("Raise error for an attempt to overwrite nucleus_num: checked.")
# initialize charge arrays as a list and convert it to numpy array # initialize charge arrays as a list and convert it to numpy array
charges = [6., 6., 6., 6., 6., 6., 1., 1., 1., 1., 1., 1.] charges = [6., 6., 6., 6., 6., 6., 1., 1., 1., 1., 1., 1.]
@ -199,7 +199,7 @@ assert rpoint_group==point_group
if trexio.has_mo_num(test_file2): if trexio.has_mo_num(test_file2):
rmo_num = trexio.read_mo_num(test_file2) rmo_num = trexio.read_mo_num(test_file2)
else: else:
print("Not reading the non-existing variable mo_num.") print("Pass on reading the non-existing variable mo_num: checked")
# close TREXIO file # close TREXIO file
#trexio.close(test_file2) #trexio.close(test_file2)
@ -215,3 +215,16 @@ except:
#==========================================================# #==========================================================#
#==========================================================#
#======= OPEN NON-EXISTING FILE TO TEST TREXIO.OPEN =======#
#==========================================================#
try:
void_file = trexio.File('non_existing.file', 'r', TEST_TREXIO_BACKEND)
except trexio.Error as e:
if e.error == trexio.TREXIO_OPEN_ERROR:
print("Opening non-existing file returns TREXIO_OPEN_ERROR: checked")
else:
raise ValueError("[DEV]: error handling of trexio_open function has changed; check the consistency")
#==========================================================#

View File

@ -37,6 +37,7 @@
%apply int *OUTPUT { int64_t* const num}; %apply int *OUTPUT { int64_t* const num};
%apply float *OUTPUT { float* const num}; %apply float *OUTPUT { float* const num};
%apply float *OUTPUT { double* const num}; %apply float *OUTPUT { double* const num};
%apply int *OUTPUT { trexio_exit_code* const rc_open};
/* Does not work for arrays (SIGSEGV) */ /* Does not work for arrays (SIGSEGV) */

View File

@ -911,11 +911,22 @@ def open(file_name: str, mode: str, back_end: int):
>>> trex_file = tr_open("example.h5", "w", TREXIO_HDF5) >>> trex_file = tr_open("example.h5", "w", TREXIO_HDF5)
""" """
# The new trexio_open function is capable of returning error code which SWIG can append to the output trexio_s file struct
# However, if trexio_s* == NULL, then SWIG returns only an error code rc_open instead of a list [trexio_s, rc_open]
# Thus, the following try/except sequence is needed
try: try:
trexio_file = pytr.trexio_open(file_name, mode, back_end) return_obj = pytr.trexio_open(file_name, mode, back_end)
assert trexio_file is not None assert return_obj is not None
if isinstance(return_obj, int):
raise Error(return_obj)
else:
rc_open = return_obj[1]
# this is a sanity check in case the code evolves and SWIG issue is patched
if rc_open == TREXIO_SUCCESS:
trexio_file = return_obj[0]
assert trexio_file is not None
except AssertionError: except AssertionError:
raise Exception(f"Could not open TREXIO file {file_name} using trexio_open function. Please make sure that there are no typos in the file name.") raise Exception(f"Could not open TREXIO file {file_name} using trexio_open function. The return value is None (NULL pointer).")
return trexio_file return trexio_file
#+end_src #+end_src