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Tests pass
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@ -333,6 +333,10 @@ pub fn read_{group_l}_{element_l}(&self, offset: usize, buffer_size:usize) -> Re
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let rc = unsafe { c::trexio_read_safe_{group}_{element}(self.ptr,
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let rc = unsafe { c::trexio_read_safe_{group}_{element}(self.ptr,
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offset, &mut buffer_size_read, idx_ptr, buffer_size_read, val_ptr, buffer_size_read)
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offset, &mut buffer_size_read, idx_ptr, buffer_size_read, val_ptr, buffer_size_read)
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};
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};
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let rc = match ExitCode::from(rc) {
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ExitCode::End => ExitCode::to_c(&ExitCode::Success),
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_ => rc
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};
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let buffer_size_read: usize = buffer_size_read.try_into().expect("try_into failed in read_{group}_{element} (buffer_size)");
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let buffer_size_read: usize = buffer_size_read.try_into().expect("try_into failed in read_{group}_{element} (buffer_size)");
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unsafe { idx.set_len({size}*buffer_size_read) };
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unsafe { idx.set_len({size}*buffer_size_read) };
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unsafe { val.set_len(buffer_size_read) };
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unsafe { val.set_len(buffer_size_read) };
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@ -123,17 +123,21 @@ impl File {
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pub fn read_determinant_list(&self, offset_file: usize, buffer_size: usize) -> Result<Vec<Bitfield>, ExitCode> {
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pub fn read_determinant_list(&self, offset_file: usize, buffer_size: usize) -> Result<Vec<Bitfield>, ExitCode> {
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let n_int = self.get_int64_num()?;
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let n_int = self.get_int64_num()?;
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let mut one_d_array: Vec<i64> = Vec::with_capacity(buffer_size * n_int);
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let mut one_d_array: Vec<i64> = Vec::with_capacity(buffer_size * 2* n_int);
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let one_d_array_ptr = one_d_array.as_ptr() as *mut i64;
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let one_d_array_ptr = one_d_array.as_ptr() as *mut i64;
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let rc = unsafe {
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let rc = unsafe {
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let offset_file: i64 = offset_file.try_into().expect("try_into failed in read_determinant_list (offset_file)");
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let offset_file: i64 = offset_file.try_into().expect("try_into failed in read_determinant_list (offset_file)");
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let mut buffer_size_read: i64 = buffer_size.try_into().expect("try_into failed in read_determinant_list (buffer_size)");
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let mut buffer_size_read: i64 = buffer_size.try_into().expect("try_into failed in read_determinant_list (buffer_size)");
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let rc = c::trexio_read_determinant_list(self.ptr, offset_file, &mut buffer_size_read, one_d_array_ptr);
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let rc = c::trexio_read_determinant_list(self.ptr, offset_file, &mut buffer_size_read, one_d_array_ptr);
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one_d_array.set_len(buffer_size_read.try_into()
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let buffer_size_read: usize = buffer_size_read.try_into().expect("try_into failed in read_determinant_list (buffer_size)");
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.expect("try_into failed in read_determinant_list (buffer_size_read)"));
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one_d_array.set_len(n_int*2usize*buffer_size_read);
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rc
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match ExitCode::from(rc) {
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ExitCode::End => ExitCode::to_c(&ExitCode::Success),
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ExitCode::Success => { assert_eq!(buffer_size_read, buffer_size); rc }
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_ => rc
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}
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};
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};
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let result: Vec::<Bitfield> = one_d_array.chunks(n_int)
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let result: Vec::<Bitfield> = one_d_array.chunks(2*n_int)
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.collect::<Vec<_>>()
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.collect::<Vec<_>>()
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.iter()
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.iter()
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.map(|x| (Bitfield::from_vec(&x)))
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.map(|x| (Bitfield::from_vec(&x)))
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@ -198,10 +198,9 @@ fn read(file_name: &str, back_end: BackEnd) -> Result<(), trexio::ExitCode> {
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let n_buffers = 8;
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let n_buffers = 8;
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let bufsize = nmax/n_buffers+10;
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let bufsize = nmax/n_buffers+10;
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/* TODO: check from here */
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for i in 0..100 {
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for i in 0..100 {
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// Quadruplet of indices + value
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// Quadruplet of indices + value
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let data = (4*i, 4*i+1, 4*i+2, 4*i+3, 3.13 + (i as f64));
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let data = (4*i, 4*i+1, 4*i+2, 4*i+3, 3.14 + (i as f64));
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ao_2e_int_eri_ref.push(data);
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ao_2e_int_eri_ref.push(data);
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}
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}
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@ -209,7 +208,7 @@ fn read(file_name: &str, back_end: BackEnd) -> Result<(), trexio::ExitCode> {
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let mut ao_2e_int_eri = Vec::<(usize,usize,usize,usize,f64)>::with_capacity(nmax);
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let mut ao_2e_int_eri = Vec::<(usize,usize,usize,usize,f64)>::with_capacity(nmax);
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for _ in 0..n_buffers {
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for _ in 0..n_buffers {
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let buffer = trex_file.read_ao_2e_int_eri(offset, bufsize)?;
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let buffer = trex_file.read_ao_2e_int_eri(offset, bufsize)?;
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offset += bufsize;
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offset += buffer.len();
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ao_2e_int_eri.extend(buffer);
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ao_2e_int_eri.extend(buffer);
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}
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}
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assert_eq!(ao_2e_int_eri_ref, ao_2e_int_eri);
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assert_eq!(ao_2e_int_eri_ref, ao_2e_int_eri);
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@ -229,13 +228,13 @@ fn read(file_name: &str, back_end: BackEnd) -> Result<(), trexio::ExitCode> {
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}
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}
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let n_buffers = 8;
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let n_buffers = 8;
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let bufsize = det_num/n_buffers + 10;
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let bufsize = det_num/n_buffers + 20;
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let mut offset = 0;
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let mut offset = 0;
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let mut det_list: Vec<Bitfield> = Vec::with_capacity(det_num);
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let mut det_list: Vec<Bitfield> = Vec::with_capacity(det_num);
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for _ in 0..n_buffers {
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for _ in 0..n_buffers {
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let buffer = trex_file.read_determinant_list(offset, bufsize)?;
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let buffer = trex_file.read_determinant_list(offset, bufsize)?;
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offset += buffer.len();
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det_list.extend(buffer);
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det_list.extend(buffer);
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offset += bufsize;
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}
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}
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assert_eq!(det_list_ref, det_list);
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assert_eq!(det_list_ref, det_list);
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@ -253,15 +252,15 @@ use std::fs;
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#[test]
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#[test]
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pub fn text_backend() {
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pub fn text_backend() {
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let _ = write("tmp/test_write.dir", trexio::BackEnd::Text);
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let _ = write("tmp/test_write.dir", trexio::BackEnd::Text).unwrap();
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let _ = read("tmp/test_write.dir", trexio::BackEnd::Text);
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let _ = read("tmp/test_write.dir", trexio::BackEnd::Text).unwrap();
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fs::remove_dir_all("tmp/test_write.dir").unwrap()
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fs::remove_dir_all("tmp/test_write.dir").unwrap()
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}
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}
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#[test]
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#[test]
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pub fn hdf5_backend() {
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pub fn hdf5_backend() {
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let _ = write("tmp/test_write.hdf5", trexio::BackEnd::Hdf5);
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let _ = write("tmp/test_write.hdf5", trexio::BackEnd::Hdf5).unwrap();
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let _ = read("tmp/test_write.hdf5", trexio::BackEnd::Hdf5);
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let _ = read("tmp/test_write.hdf5", trexio::BackEnd::Hdf5).unwrap();
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fs::remove_file("tmp/test_write.hdf5").unwrap()
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fs::remove_file("tmp/test_write.hdf5").unwrap()
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}
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}
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