mirror of
https://github.com/TREX-CoE/trexio.git
synced 2024-12-22 20:35:44 +01:00
remove H5LDget_dset_dims to be compatible with HDF5 v.1.8.21
This commit is contained in:
parent
6b18a64a8e
commit
3bd730557c
@ -298,15 +298,6 @@ trexio_hdf5_read_$group_dset$ (trexio_t* const file, $group_dset_dtype$* const $
|
||||
|
||||
const trexio_hdf5_t* f = (const trexio_hdf5_t*) file;
|
||||
|
||||
herr_t status;
|
||||
int rrank;
|
||||
// get the rank of the dataset in a file
|
||||
status = H5LTget_dataset_ndims (f->$group$_group, $GROUP_DSET$_NAME, &rrank);
|
||||
|
||||
if (status < 0) return TREXIO_FAILURE;
|
||||
|
||||
if (rrank != (int) rank) return TREXIO_INVALID_ARG_3;
|
||||
|
||||
// open the dataset to get its dimensions
|
||||
hid_t dset_id = H5Dopen(f->$group$_group, $GROUP_DSET$_NAME, H5P_DEFAULT);
|
||||
if (dset_id <= 0) return TREXIO_INVALID_ID;
|
||||
@ -315,28 +306,37 @@ trexio_hdf5_read_$group_dset$ (trexio_t* const file, $group_dset_dtype$* const $
|
||||
hsize_t* ddims = CALLOC( (int) rank, hsize_t);
|
||||
if (ddims == NULL) return TREXIO_FAILURE;
|
||||
|
||||
// read dimensions from the existing dataset
|
||||
status = H5LDget_dset_dims(dset_id, ddims);
|
||||
// get the dataspace of the dataset
|
||||
hid_t dspace_id = H5Dget_space(dset_id);
|
||||
// get the rank and dimensions of the dataset
|
||||
int rrank = H5Sget_simple_extent_dims(dspace_id, ddims, NULL);
|
||||
|
||||
H5Dclose(dset_id);
|
||||
if (status < 0) {
|
||||
// check that dimensions are consistent
|
||||
if (rrank != (int) rank) {
|
||||
FREE(ddims);
|
||||
return TREXIO_FAILURE;
|
||||
H5Sclose(dspace_id);
|
||||
H5Dclose(dset_id);
|
||||
return TREXIO_INVALID_ARG_3;
|
||||
}
|
||||
|
||||
for (uint32_t i=0; i<rank; ++i){
|
||||
if (ddims[i] != dims[i]) {
|
||||
FREE(ddims);
|
||||
H5Sclose(dspace_id);
|
||||
H5Dclose(dset_id);
|
||||
return TREXIO_INVALID_ARG_4;
|
||||
}
|
||||
}
|
||||
|
||||
FREE(ddims);
|
||||
H5Sclose(dspace_id);
|
||||
H5Dclose(dset_id);
|
||||
|
||||
/* High-level H5LT API. No need to deal with dataspaces and datatypes */
|
||||
status = H5LTread_dataset(f->$group$_group,
|
||||
$GROUP_DSET$_NAME,
|
||||
H5T_$GROUP_DSET_H5_DTYPE$,
|
||||
$group_dset$);
|
||||
herr_t status = H5LTread_dataset(f->$group$_group,
|
||||
$GROUP_DSET$_NAME,
|
||||
H5T_$GROUP_DSET_H5_DTYPE$,
|
||||
$group_dset$);
|
||||
if (status < 0) return TREXIO_FAILURE;
|
||||
|
||||
return TREXIO_SUCCESS;
|
||||
|
Loading…
Reference in New Issue
Block a user