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The Verificarlo CI was failing du to a change in how git detects repositories after a security vulnerability : https://github.blog/2022-04-12-git-security-vulnerability-announced/ The simplest fix for now is probably to set the safe.directory get variable to avoid the new behaviour. |
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vfc_tests_config.json |
QMCkl: Quantum Monte Carlo Kernel Library
The domain of quantum chemistry needs a library in which the main kernels of Quantum Monte Carlo (QMC) methods are implemented. In the library proposed in this project, we expose the main algorithms in a simple language and provide a standard API and tests to enable the development of high-performance QMCkl implementations taking advantage of modern hardware.
See the source code to read the documentation.
To clone the repository, use:
git clone https://github.com/TREX-CoE/qmckl.git
Installation
The simplest way to obtain the source files of QMCkl is to download a source distribution. This particular repository is for maintainers, who write the kernels in org-mode files and produce the source code and the documentation from these files.
For maintainers
./autogen.sh
./configure --prefix=$PWD/_install
make
make check
For users
Obtain a source distribution.
To build the documentation version:
./configure
To build an optimized version with Intel compilers:
./configure \
--with-icc \
--with-ifort \
--enable-hpc \
--with-openmp
To build an optimized version with GCC:
./configure \
CC=gcc \
CFLAGS="-g -O2 -march=native -flto -fno-trapping-math -fno-math-errno -ftree-vectorize" \
FC=gfortran \
FCFLAGS="-g -O2 -march=native -flto -ftree-vectorize" \
--enable-hpc \
--with-openmp
Then, compile with:
make -j
make -j check
sudo make install
sudo make installcheck
Python API
- SWIG (>= 4.0) is required to build the Python API for maintainers
In order to install the qmckl
Python package, first
install the shared C library libqmckl
following the
installation guide above and then run the following command:
make python-install
To test the installation, run
make python-test
Minimal example demonstrating the use of the qmckl
Python API can be found in the test_api.py
file.
We highly recommend to use virtual environments to avoid compatibility issues and to improve reproducibility.
Installation procedure for Guix users
QMCkl can be installed with the GNU
Guix functional package manager. The qmckl.scm
Schema file contains the manifest specification for the
qmckl
installations. It can be installed within the
selected $GUIX_PROFILE
as follows:
guix package \
--profile=$GUIX_PROFILE \
--load-path=<path_to_trexio_scm> \
--cores=<n_cores> \
--install-from-file=qmckl.scm
where <path_to_trexio_scm>
should point to a
folder, which contains the TREXIO manifest file trexio.scm
(e.g. ~/trexio/tools/
if TREXIO repository was cloned under
$HOME).
Installation procedures for both development version
(qmckl-dev
) and stable releases (qmckl-hpc
)
are provided. One can switch between them using the return value (last
line) in the qmckl.scm
file.
Linking to your program
The make install
command takes care of installing the
QMCkl shared library on the user machine. Once installed, add
-lqmckl
to the list of compiler options.
In some cases (e.g. when using custom prefix
during
configuration), the QMCkl library might end up installed in a directory,
which is absent in the default $LIBRARY_PATH
. In order to
link the program against QMCkl, the search paths can be modified as
follows:
export LIBRARY_PATH=$LIBRARY_PATH:<path_to_qmckl>/lib
(same holds for $LD_LIBRARY_PATH
). The
<path_to_qmckl>
has to be replaced with the prefix
used during the installation.
If your project relies on the CMake build system, feel free to use the FindQMCKL.cmake module to find and link the QMCkl library automatically.
Verificarlo CI
Since Verificarlo should not be a dependency of QMCkl, all Verificarlo functions are called only when the support is explicitely enabled (and ignored by the preprocessor otherwise). To enable vfc_ci support, the library should be configured with the following command :
./configure \
CC="verificarlo-f" \
FC="verificarlo-f" \
--prefix=$PWD/_install \
--enable-vfc_ci \
--host=x86_64 \
where CC and FC are set to verificarlo-f, and support is explicitely enabled with the –enable-vfc_ci flag. Configuring the library with the “standard” command will cause all calls to Verificarlo related functions to be ignored, and the library will be built as usual.
TREX: Targeting Real Chemical Accuracy at the Exascale project has received funding from the European Union’s Horizon 2020 - Research and Innovation program - under grant agreement no. 952165. The content of this document does not represent the opinion of the European Union, and the European Union is not responsible for any use that might be made of such content.