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Merge branch 'master' into add-python-api

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This commit is contained in:
Anthony Scemama 2022-05-20 19:19:42 +02:00
commit e00e034497
16 changed files with 4295 additions and 1388 deletions
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2
.github/workflows/test-build.yml vendored
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@ -2,9 +2,7 @@ name: test-build
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
x86_ubuntu:

171
configure.ac
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@ -93,6 +93,7 @@ AC_PROG_F77
m4_version_prereq([2.70],[], [AC_PROG_CC_C99])
AS_IF([test "$ac_cv_prog_cc_c99" = "no"], [AC_MSG_ERROR([The compiler does not support C99])])
AC_PROG_CC_C_O
AM_PROG_CC_C_O
AC_PROG_FC
AC_PROG_FC_C_O
AC_FC_PP_DEFINE
@ -137,10 +138,10 @@ case "$with_chameleon" in
[PKG_CFLAGS="$PKG_CFLAGS $LIBCHAMELEON_CFLAGS"
PKG_LIBS="$PKG_LIBS $LIBCHAMELEON_LIBS"]
,[
## something went wrong.
## try to find the package without pkg-config
## check that the library is actually new enough.
## by testing for a 1.0.0+ function which we use
AC_CHECK_LIB(chameleon,CHAMELEON_finalize,[LIBCHAMELEON_LIBS="-lchameleon"])
@ -212,6 +213,9 @@ esac
case $CC in
*gcc*)
CFLAGS="$CFLAGS -fPIC"
;;
*nvc*)
CFLAGS="$CFLAGS -fPIC"
;;
@ -224,6 +228,131 @@ AS_IF([test "$HAVE_HPC" = "yes"], [
AC_DEFINE([HAVE_HPC], [1], [If defined, activate HPC routines])
])
# Enable Verificarlo tests
AC_ARG_ENABLE([vfc_ci],
[ --enable-vfc_ci Build the library with vfc_ci support],
[case "${enableval}" in
yes) vfc_ci=true && FCFLAGS="-D VFC_CI $FCFLAGS" && CFLAGS="-D VFC_CI $CFLAGS";;
no) vfc_ci=false ;;
*) AC_MSG_ERROR([bad value ${enableval} for --enable_vfc_ci]) ;;
esac],[vfc_ci=false])
AM_CONDITIONAL([VFC_CI], [test x$vfc_ci = xtrue])
if test "$FC" = "verificarlo-f"; then
AC_MSG_NOTICE(verificarlo-f detected)
# Arguments order is important here
FCFLAGS="-Mpreprocess $FCFLAGS"
fi
## Enable GPU offloading
# GPU offloading
AC_ARG_ENABLE(gpu, [AS_HELP_STRING([--enable-gpu],[openmp|openacc : Use GPU-offloaded functions])], enable_gpu=$enableval, enable_gpu=no)
AS_IF([test "$enable_gpu" = "yes"], [enable_gpu="openmp"])
# OpenMP offloading
HAVE_OPENMP_OFFLOAD="no"
AS_IF([test "$enable_gpu" = "openmp"], [
AC_DEFINE([HAVE_OPENMP_OFFLOAD], [1], [If defined, activate OpenMP-offloaded routines])
HAVE_OPENMP_OFFLOAD="yes"
case $CC in
*gcc*)
CFLAGS="$CFLAGS -fopenmp"
;;
*nvc*)
CFLAGS="$CFLAGS -mp=gpu"
;;
esac
case $FC in
*gfortran*)
FCFLAGS="$FCFLAGS -fopenmp"
;;
*nvfortran*)
FCFLAGS="$FCFLAGS -mp=gpu"
;;
esac]
)
# OpenMP offloading
HAVE_OPENACC_OFFLOAD="no"
AS_IF([test "$enable_gpu" = "openacc"], [
AC_DEFINE([HAVE_OPENACC_OFFLOAD], [1], [If defined, activate OpenACC-offloaded routines])
HAVE_OPENACC_OFFLOAD="yes"
case $CC in
*gcc*)
CFLAGS="$CFLAGS -fopenacc"
;;
*nvc*)
CFLAGS="$CFLAGS -acc=gpu"
;;
esac
case $FC in
*gfortran*)
FCFLAGS="$FCFLAGS -fopenacc"
;;
*nvfortran*)
FCFLAGS="$FCFLAGS -acc=gpu"
;;
esac
])
# cuBLAS offloading
AC_ARG_WITH(cublas, [AS_HELP_STRING([--with-cublas],[Use cuBLAS-offloaded functions])], HAVE_CUBLAS_OFFLOAD=$withval, HAVE_CUBLAS_OFFLOAD=no)
AS_IF([test "$HAVE_CUBLAS_OFFLOAD" = "yes"], [
AC_DEFINE([HAVE_CUBLAS_OFFLOAD], [1], [If defined, activate cuBLAS-offloaded routines])
HAVE_OPENACC_OFFLOAD="yes"
case $CC in
*gcc*)
CFLAGS="$CFLAGS -fopenmp"
LDFLAGS="-lcublas"
;;
*nvc*)
CFLAGS="$CFLAGS -mp=gpu -cudalib=cublas"
;;
esac
case $FC in
*gfortran*)
FCFLAGS="$FCFLAGS -fopenmp"
;;
*nvfortran*)
FCFLAGS="$FCFLAGS -mp=gpu -cudalib=cublas"
;;
esac
])
AC_ARG_ENABLE(malloc-trace, [AS_HELP_STRING([--enable-malloc-trace],[use debug malloc/free])], ok=$enableval, ok=no)
if test "$ok" = "yes"; then
AC_DEFINE(MALLOC_TRACE,"malloc_trace.dat",[Define to use debugging malloc/free])
ARGS="${ARGS} malloc-trace"
fi
AC_ARG_ENABLE(prof, [AS_HELP_STRING([--enable-prof],[compile for profiling])], ok=$enableval, ok=no)
if test "$ok" = "yes"; then
CFLAGS="${CFLAGS} -pg"
AC_DEFINE(ENABLE_PROF,1,[Define when using the profiler tool])
ARGS="${ARGS} prof"
fi
AC_ARG_WITH(efence, [AS_HELP_STRING([--with-efence],[use ElectricFence library])], ok=$withval, ok=no)
if test "$ok" = "yes"; then
AC_CHECK_LIB([efence], [malloc])
ARGS="${ARGS} efence"
fi
##
AC_ARG_ENABLE(debug, [AS_HELP_STRING([--enable-debug],[compile for debugging])], ok=$enableval, ok=no)
if test "$ok" = "yes"; then
if test "$GCC" = "yes"; then
@ -247,26 +376,6 @@ if test "$ok" = "yes"; then
ARGS="${ARGS} debug"
fi
AC_ARG_ENABLE(malloc-trace, [AS_HELP_STRING([--enable-malloc-trace],[use debug malloc/free])], ok=$enableval, ok=no)
if test "$ok" = "yes"; then
AC_DEFINE(MALLOC_TRACE,"malloc_trace.dat",[Define to use debugging malloc/free])
ARGS="${ARGS} malloc-trace"
fi
AC_ARG_ENABLE(prof, [AS_HELP_STRING([--enable-prof],[compile for profiling])], ok=$enableval, ok=no)
if test "$ok" = "yes"; then
CFLAGS="${CFLAGS} -pg"
AC_DEFINE(ENABLE_PROF,1,[Define when using the profiler tool])
ARGS="${ARGS} prof"
fi
AC_ARG_WITH(efence, [AS_HELP_STRING([--with-efence],[use ElectricFence library])], ok=$withval, ok=no)
if test "$ok" = "yes"; then
AC_CHECK_LIB(efence, malloc)
ARGS="${ARGS} efence"
fi
# Checks for header files.
## qmckl
@ -321,21 +430,6 @@ if test "x${QMCKL_DEVEL}" != "x"; then
fi
# Enable Verificarlo tests
AC_ARG_ENABLE([vfc_ci],
[ --enable-vfc_ci Build the library with vfc_ci support],
[case "${enableval}" in
yes) vfc_ci=true && FCFLAGS="-D VFC_CI $FCFLAGS" && CFLAGS="-D VFC_CI $CFLAGS";;
no) vfc_ci=false ;;
*) AC_MSG_ERROR([bad value ${enableval} for --enable_vfc_ci]) ;;
esac],[vfc_ci=false])
AM_CONDITIONAL([VFC_CI], [test x$vfc_ci = xtrue])
if test "$FC" = "verificarlo-f"; then
AC_MSG_NOTICE(verificarlo-f detected)
# Arguments order is important here
FCFLAGS="-Mpreprocess $FCFLAGS"
fi
#PKG-CONFIG
#mkl-dynamic-lp64-seq
@ -371,6 +465,9 @@ LDFLAGS:........: ${LDFLAGS}
LIBS............: ${LIBS}
USE CHAMELEON...: ${with_chameleon}
HPC version.....: ${HAVE_HPC}
OpenMP offload..: ${HAVE_OPENMP_OFFLOAD}
OpenACC offload.: ${HAVE_OPENACC_OFFLOAD}
cuBLAS offload..: ${HAVE_CUBLAS_OFFLOAD}
Package features:
${ARGS}

1087
org/qmckl_ao.org
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6
org/qmckl_blas.org
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@ -84,8 +84,8 @@ are not intended to be passed to external codes.
#+begin_src c :comments org :tangle (eval h_private_type) :exports none
typedef struct qmckl_vector {
int64_t size;
double* restrict data;
int64_t size;
} qmckl_vector;
#+end_src
@ -160,8 +160,8 @@ qmckl_vector_free( qmckl_context context,
#+begin_src c :comments org :tangle (eval h_private_type) :exports none
typedef struct qmckl_matrix {
int64_t size[2];
double* restrict data;
int64_t size[2];
} qmckl_matrix;
#+end_src
@ -245,9 +245,9 @@ qmckl_matrix_free( qmckl_context context,
#define QMCKL_TENSOR_ORDER_MAX 16
typedef struct qmckl_tensor {
double* restrict data;
int64_t order;
int64_t size[QMCKL_TENSOR_ORDER_MAX];
double* restrict data;
} qmckl_tensor;
#+end_src

4
org/qmckl_context.org
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@ -169,7 +169,7 @@ qmckl_context qmckl_context_check(const qmckl_context context) {
if (context == QMCKL_NULL_CONTEXT)
return QMCKL_NULL_CONTEXT;
const qmckl_context_struct* const ctx = (const qmckl_context_struct*) context;
const qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
/* Try to access memory */
if (ctx->tag != VALID_TAG) {
@ -267,7 +267,7 @@ qmckl_context qmckl_context_create() {
{
ctx->tag = VALID_TAG;
const qmckl_context context = (const qmckl_context) ctx;
const qmckl_context context = (qmckl_context) ctx;
assert ( qmckl_context_check(context) != QMCKL_NULL_CONTEXT );
qmckl_exit_code rc;

113
org/qmckl_determinant.org
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@ -182,7 +182,7 @@ qmckl_exit_code qmckl_init_determinant(qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
ctx->det.uninitialized = (1 << 6) - 1;
@ -216,7 +216,7 @@ bool qmckl_determinant_provided(const qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
return ctx->det.provided;
@ -238,7 +238,7 @@ char qmckl_get_determinant_type (const qmckl_context context) {
return (char) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1;
@ -256,7 +256,7 @@ int64_t qmckl_get_determinant_walk_num (const qmckl_context context) {
return (int64_t) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 1;
@ -274,7 +274,7 @@ int64_t qmckl_get_determinant_det_num_alpha (const qmckl_context context) {
return (int64_t) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 2;
@ -292,7 +292,7 @@ int64_t qmckl_get_determinant_det_num_beta (const qmckl_context context) {
return (int64_t) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 3;
@ -310,7 +310,7 @@ int64_t* qmckl_get_determinant_mo_index_alpha (const qmckl_context context) {
return NULL;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 4;
@ -328,7 +328,7 @@ int64_t* qmckl_get_determinant_mo_index_beta (const qmckl_context context) {
return NULL;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 5;
@ -363,7 +363,7 @@ if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
#+end_src
#+NAME:post2
@ -525,7 +525,7 @@ qmckl_exit_code qmckl_finalize_determinant(qmckl_context context) {
NULL);
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
qmckl_exit_code rc;
@ -596,7 +596,7 @@ qmckl_exit_code qmckl_get_det_vgl_alpha(qmckl_context context, double * const de
rc = qmckl_provide_det_vgl_alpha(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = 5 * ctx->det.det_num_alpha * ctx->det.walk_num *
@ -623,7 +623,7 @@ qmckl_exit_code qmckl_get_det_vgl_beta(qmckl_context context, double * const det
rc = qmckl_provide_det_vgl_beta(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = 5 * ctx->det.det_num_beta * ctx->det.walk_num *
@ -649,7 +649,7 @@ qmckl_exit_code qmckl_provide_det_vgl_alpha(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -748,7 +748,7 @@ qmckl_exit_code qmckl_provide_det_vgl_beta(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -1134,36 +1134,28 @@ end function qmckl_compute_det_vgl_beta_f
#+begin_src c :tangle (eval c_test) :exports none
#define walk_num chbrclf_walk_num
#define elec_num chbrclf_elec_num
#define shell_num chbrclf_shell_num
#define ao_num chbrclf_ao_num
int64_t elec_up_num = chbrclf_elec_up_num;
int64_t elec_dn_num = chbrclf_elec_dn_num;
double* elec_coord = &(chbrclf_elec_coord[0][0][0]);
const int64_t nucl_num = chbrclf_nucl_num;
const double* nucl_charge = chbrclf_charge;
const double* nucl_coord = &(chbrclf_nucl_coord[0][0]);
rc = qmckl_set_electron_num (context, elec_up_num, elec_dn_num);
rc = qmckl_set_electron_num (context, chbrclf_elec_up_num, chbrclf_elec_dn_num);
assert (rc == QMCKL_SUCCESS);
rc = qmckl_set_electron_walk_num (context, walk_num);
rc = qmckl_set_electron_walk_num (context, chbrclf_walk_num);
assert (rc == QMCKL_SUCCESS);
assert(qmckl_electron_provided(context));
rc = qmckl_set_electron_coord (context, 'N', elec_coord, walk_num*elec_num*3);
rc = qmckl_set_electron_coord (context, 'N', elec_coord, chbrclf_walk_num*chbrclf_elec_num*3);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_nucleus_num (context, nucl_num);
rc = qmckl_set_nucleus_num (context, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_nucleus_coord (context, 'T', &(nucl_coord[0]), nucl_num*3);
rc = qmckl_set_nucleus_coord (context, 'T', &(nucl_coord[0]), chbrclf_nucl_num*3);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_nucleus_charge(context, nucl_charge, nucl_num);
rc = qmckl_set_nucleus_charge(context, nucl_charge, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(qmckl_nucleus_provided(context));
@ -1195,27 +1187,27 @@ rc = qmckl_set_ao_basis_prim_num (context, chbrclf_prim_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_nucleus_index (context, nucleus_index, nucl_num);
rc = qmckl_set_ao_basis_nucleus_index (context, nucleus_index, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_nucleus_shell_num (context, nucleus_shell_num, nucl_num);
rc = qmckl_set_ao_basis_nucleus_shell_num (context, nucleus_shell_num, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_shell_ang_mom (context, shell_ang_mom, shell_num);
rc = qmckl_set_ao_basis_shell_ang_mom (context, shell_ang_mom, chbrclf_shell_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_shell_factor (context, shell_factor, shell_num);
rc = qmckl_set_ao_basis_shell_factor (context, shell_factor, chbrclf_shell_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_shell_prim_num (context, shell_prim_num, shell_num);
rc = qmckl_set_ao_basis_shell_prim_num (context, shell_prim_num, chbrclf_shell_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_shell_prim_index (context, shell_prim_index, shell_num);
rc = qmckl_set_ao_basis_shell_prim_index (context, shell_prim_index, chbrclf_shell_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
@ -1239,14 +1231,13 @@ assert(rc == QMCKL_SUCCESS);
assert(qmckl_ao_basis_provided(context));
double ao_vgl[walk_num*elec_num][5][chbrclf_ao_num];
double ao_vgl[chbrclf_walk_num*chbrclf_elec_num][5][chbrclf_ao_num];
rc = qmckl_get_ao_basis_ao_vgl(context, &(ao_vgl[0][0][0]), (int64_t) 5*walk_num*elec_num*chbrclf_ao_num);
rc = qmckl_get_ao_basis_ao_vgl(context, &(ao_vgl[0][0][0]), (int64_t) 5*chbrclf_walk_num*chbrclf_elec_num*chbrclf_ao_num);
assert (rc == QMCKL_SUCCESS);
/* Set up MO data */
const int64_t mo_num = chbrclf_mo_num;
rc = qmckl_set_mo_basis_mo_num(context, mo_num);
rc = qmckl_set_mo_basis_mo_num(context, chbrclf_mo_num);
assert (rc == QMCKL_SUCCESS);
const double * mo_coefficient = &(chbrclf_mo_coef[0]);
@ -1256,31 +1247,31 @@ assert (rc == QMCKL_SUCCESS);
assert(qmckl_mo_basis_provided(context));
double mo_vgl[walk_num*elec_num][5][chbrclf_mo_num];
rc = qmckl_get_mo_basis_mo_vgl(context, &(mo_vgl[0][0][0]), 5*walk_num*elec_num*chbrclf_mo_num);
double mo_vgl[chbrclf_walk_num*chbrclf_elec_num][5][chbrclf_mo_num];
rc = qmckl_get_mo_basis_mo_vgl(context, &(mo_vgl[0][0][0]), 5*chbrclf_walk_num*chbrclf_elec_num*chbrclf_mo_num);
assert (rc == QMCKL_SUCCESS);
/* Set up determinant data */
const int64_t det_num_alpha = 1;
const int64_t det_num_beta = 1;
int64_t mo_index_alpha[det_num_alpha][walk_num][elec_up_num];
int64_t mo_index_beta[det_num_alpha][walk_num][elec_dn_num];
#define det_num_alpha 1
#define det_num_beta 1
int64_t mo_index_alpha[det_num_alpha][chbrclf_walk_num][chbrclf_elec_up_num];
int64_t mo_index_beta[det_num_alpha][chbrclf_walk_num][chbrclf_elec_dn_num];
int i, j, k;
for(k = 0; k < det_num_alpha; ++k)
for(i = 0; i < walk_num; ++i)
for(j = 0; j < elec_up_num; ++j)
for(i = 0; i < chbrclf_walk_num; ++i)
for(j = 0; j < chbrclf_elec_up_num; ++j)
mo_index_alpha[k][i][j] = j + 1;
for(k = 0; k < det_num_beta; ++k)
for(i = 0; i < walk_num; ++i)
for(j = 0; j < elec_up_num; ++j)
for(i = 0; i < chbrclf_walk_num; ++i)
for(j = 0; j < chbrclf_elec_up_num; ++j)
mo_index_beta[k][i][j] = j + 1;
rc = qmckl_set_determinant_type (context, typ);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_determinant_walk_num (context, walk_num);
rc = qmckl_set_determinant_walk_num (context, chbrclf_walk_num);
assert (rc == QMCKL_SUCCESS);
rc = qmckl_set_determinant_det_num_alpha (context, det_num_alpha);
@ -1297,8 +1288,8 @@ assert (rc == QMCKL_SUCCESS);
// Get slater-determinant
double det_vgl_alpha[det_num_alpha][walk_num][5][elec_up_num][elec_up_num];
double det_vgl_beta[det_num_beta][walk_num][5][elec_dn_num][elec_dn_num];
double det_vgl_alpha[det_num_alpha][chbrclf_walk_num][5][chbrclf_elec_up_num][chbrclf_elec_up_num];
double det_vgl_beta[det_num_beta][chbrclf_walk_num][5][chbrclf_elec_dn_num][chbrclf_elec_dn_num];
rc = qmckl_get_det_vgl_alpha(context, &(det_vgl_alpha[0][0][0][0][0]));
assert (rc == QMCKL_SUCCESS);
@ -1347,7 +1338,7 @@ qmckl_exit_code qmckl_get_det_inv_matrix_alpha(qmckl_context context, double * c
rc = qmckl_provide_det_inv_matrix_alpha(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->det.det_num_alpha * ctx->det.walk_num * ctx->electron.up_num * ctx->electron.up_num;
@ -1376,7 +1367,7 @@ qmckl_exit_code qmckl_get_det_inv_matrix_beta(qmckl_context context, double * co
rc = qmckl_provide_det_inv_matrix_beta(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->det.det_num_alpha * ctx->det.walk_num * ctx->electron.down_num * ctx->electron.down_num;
@ -1405,7 +1396,7 @@ qmckl_exit_code qmckl_get_det_adj_matrix_alpha(qmckl_context context, double * c
rc = qmckl_provide_det_inv_matrix_alpha(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->det.det_num_alpha * ctx->det.walk_num * ctx->electron.up_num * ctx->electron.up_num;
@ -1434,7 +1425,7 @@ qmckl_exit_code qmckl_get_det_adj_matrix_beta(qmckl_context context, double * co
rc = qmckl_provide_det_inv_matrix_beta(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->det.det_num_alpha * ctx->det.walk_num * ctx->electron.down_num * ctx->electron.down_num;
@ -1463,7 +1454,7 @@ qmckl_exit_code qmckl_get_det_alpha(qmckl_context context, double * const det_va
rc = qmckl_provide_det_inv_matrix_alpha(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->det.det_num_alpha * ctx->det.walk_num;
@ -1492,7 +1483,7 @@ qmckl_exit_code qmckl_get_det_beta(qmckl_context context, double * const det_val
rc = qmckl_provide_det_inv_matrix_beta(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->det.det_num_alpha * ctx->det.walk_num;
@ -1517,7 +1508,7 @@ qmckl_exit_code qmckl_provide_det_inv_matrix_alpha(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -1640,7 +1631,7 @@ qmckl_exit_code qmckl_provide_det_inv_matrix_beta(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -2047,8 +2038,8 @@ end function qmckl_compute_det_inv_matrix_beta_f
#+begin_src c :tangle (eval c_test) :exports none
// Get adjoint of the slater-determinant
double det_inv_matrix_alpha[det_num_alpha][walk_num][elec_up_num][elec_up_num];
double det_inv_matrix_beta[det_num_beta][walk_num][elec_dn_num][elec_dn_num];
double det_inv_matrix_alpha[det_num_alpha][chbrclf_walk_num][chbrclf_elec_up_num][chbrclf_elec_up_num];
double det_inv_matrix_beta[det_num_beta][chbrclf_walk_num][chbrclf_elec_dn_num][chbrclf_elec_dn_num];
rc = qmckl_get_det_inv_matrix_alpha(context, &(det_inv_matrix_alpha[0][0][0][0]));
assert (rc == QMCKL_SUCCESS);

80
org/qmckl_electron.org
View File

@ -97,8 +97,8 @@ int main() {
| ~ee_distance_rescaled_deriv_e_date~ | ~uint64_t~ | Last modification date of the electron-electron distance derivatives |
| ~ee_pot~ | ~double[walk_num]~ | Electron-electron rescaled distances derivatives |
| ~ee_pot_date~ | ~uint64_t~ | Last modification date of the electron-electron distance derivatives |
| ~en_pot~ | double[walk_num] | Electron-nucleus potential energy |
| ~en_pot_date~ | int64_t | Date when the electron-nucleus potential energy was computed |
| ~en_pot~ | ~double[walk_num]~ | Electron-nucleus potential energy |
| ~en_pot_date~ | ~int64_t~ | Date when the electron-nucleus potential energy was computed |
| ~en_distance_rescaled~ | ~double[walk_num][nucl_num][num]~ | Electron-nucleus distances |
| ~en_distance_rescaled_date~ | ~uint64_t~ | Last modification date of the electron-electron distances |
| ~en_distance_rescaled_deriv_e~ | ~double[walk_num][4][nucl_num][num]~ | Electron-electron rescaled distances derivatives |
@ -157,7 +157,7 @@ qmckl_exit_code qmckl_init_electron(qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
ctx->electron.uninitialized = (1 << 2) - 1;
@ -182,7 +182,7 @@ bool qmckl_electron_provided(const qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
return ctx->electron.provided;
@ -228,7 +228,7 @@ qmckl_get_electron_num (const qmckl_context context, int64_t* const num) {
"num is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 0;
@ -256,7 +256,7 @@ qmckl_get_electron_up_num (const qmckl_context context, int64_t* const up_num) {
"up_num is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 0;
@ -284,7 +284,7 @@ qmckl_get_electron_down_num (const qmckl_context context, int64_t* const down_nu
"down_num is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 0;
@ -323,7 +323,7 @@ qmckl_get_electron_walk_num (const qmckl_context context, int64_t* const walk_nu
"walk_num is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 1;
@ -360,7 +360,7 @@ qmckl_get_electron_rescale_factor_ee (const qmckl_context context, double* const
"rescale_factor_kappa_ee is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
assert (ctx->electron.rescale_factor_kappa_ee > 0.0);
@ -383,7 +383,7 @@ qmckl_get_electron_rescale_factor_en (const qmckl_context context, double* const
"rescale_factor_kappa_en is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
assert (ctx->electron.rescale_factor_kappa_en > 0.0);
@ -448,7 +448,7 @@ qmckl_get_electron_coord (const qmckl_context context,
return QMCKL_INVALID_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->electron.provided) {
@ -489,7 +489,7 @@ if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
#+end_src
#+NAME:post2
@ -897,7 +897,7 @@ qmckl_exit_code qmckl_get_electron_ee_distance(qmckl_context context, double* co
rc = qmckl_provide_ee_distance(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.num * ctx->electron.num * ctx->electron.walk_num;
@ -921,7 +921,7 @@ qmckl_exit_code qmckl_provide_ee_distance(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
@ -1138,7 +1138,7 @@ qmckl_exit_code qmckl_get_electron_ee_distance_rescaled(qmckl_context context, d
rc = qmckl_provide_ee_distance_rescaled(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.num * ctx->electron.num * ctx->electron.walk_num;
@ -1162,7 +1162,7 @@ qmckl_exit_code qmckl_provide_ee_distance_rescaled(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
@ -1218,7 +1218,7 @@ qmckl_exit_code qmckl_provide_ee_distance_rescaled(qmckl_context context)
| ~elec_num~ | ~int64_t~ | in | Number of electrons |
| ~rescale_factor_kappa_ee~ | ~double~ | in | Factor to rescale ee distances |
| ~walk_num~ | ~int64_t~ | in | Number of walkers |
| ~coord~ | ~double[walk_num][3][elec_num]~ | in | Electron coordinates |
| ~coord~ | ~double[3][walk_num][elec_num]~ | in | Electron coordinates |
| ~ee_distance~ | ~double[walk_num][elec_num][elec_num]~ | out | Electron-electron rescaled distances |
#+begin_src f90 :comments org :tangle (eval f) :noweb yes
@ -1231,7 +1231,7 @@ integer function qmckl_compute_ee_distance_rescaled_f(context, elec_num, rescale
integer*8 , intent(in) :: elec_num
double precision , intent(in) :: rescale_factor_kappa_ee
integer*8 , intent(in) :: walk_num
double precision , intent(in) :: coord(elec_num,3,walk_num)
double precision , intent(in) :: coord(elec_num,walk_num,3)
double precision , intent(out) :: ee_distance_rescaled(elec_num,elec_num,walk_num)
integer*8 :: k
@ -1357,7 +1357,7 @@ assert(fabs(ee_distance_rescaled[elec_num*elec_num+1]-0.9985724058042633) < 1.e-
#+end_src
** Electron-electron rescaled distance gradients and laplacian with respect to electron coords
** Electron-electron rescaled distance gradients and Laplacian with respect to electron coords
The rescaled distances which is given as $R = (1 - \exp{-\kappa r})/\kappa$
needs to be perturbed with respect to the electorn coordinates.
@ -1384,7 +1384,7 @@ qmckl_exit_code qmckl_get_electron_ee_distance_rescaled_deriv_e(qmckl_context co
rc = qmckl_provide_ee_distance_rescaled_deriv_e(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = 4 * ctx->electron.num * ctx->electron.num * ctx->electron.walk_num;
@ -1408,7 +1408,7 @@ qmckl_exit_code qmckl_provide_ee_distance_rescaled_deriv_e(qmckl_context context
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
@ -1464,7 +1464,7 @@ qmckl_exit_code qmckl_provide_ee_distance_rescaled_deriv_e(qmckl_context context
| ~elec_num~ | ~int64_t~ | in | Number of electrons |
| ~rescale_factor_kappa_ee~ | ~double~ | in | Factor to rescale ee distances |
| ~walk_num~ | ~int64_t~ | in | Number of walkers |
| ~coord~ | ~double[walk_num][3][elec_num]~ | in | Electron coordinates |
| ~coord~ | ~double[3][walk_num][elec_num]~ | in | Electron coordinates |
| ~ee_distance_deriv_e~ | ~double[walk_num][4][elec_num][elec_num]~ | out | Electron-electron rescaled distance derivatives |
#+begin_src f90 :comments org :tangle (eval f) :noweb yes
@ -1477,7 +1477,7 @@ integer function qmckl_compute_ee_distance_rescaled_deriv_e_f(context, elec_num,
integer*8 , intent(in) :: elec_num
double precision , intent(in) :: rescale_factor_kappa_ee
integer*8 , intent(in) :: walk_num
double precision , intent(in) :: coord(elec_num,3,walk_num)
double precision , intent(in) :: coord(elec_num,walk_num,3)
double precision , intent(out) :: ee_distance_rescaled_deriv_e(4,elec_num,elec_num,walk_num)
integer*8 :: k
@ -1501,8 +1501,8 @@ integer function qmckl_compute_ee_distance_rescaled_deriv_e_f(context, elec_num,
do k=1,walk_num
info = qmckl_distance_rescaled_deriv_e(context, 'T', 'T', elec_num, elec_num, &
coord(1,1,k), elec_num, &
coord(1,1,k), elec_num, &
coord(1,k,1), elec_num*walk_num, &
coord(1,k,1), elec_num*walk_num, &
ee_distance_rescaled_deriv_e(1,1,1,k), elec_num, rescale_factor_kappa_ee)
if (info /= QMCKL_SUCCESS) then
exit
@ -1613,7 +1613,7 @@ qmckl_exit_code qmckl_get_electron_ee_potential(qmckl_context context, double* c
rc = qmckl_provide_ee_potential(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.walk_num * sizeof(double);
@ -1637,7 +1637,7 @@ qmckl_exit_code qmckl_provide_ee_potential(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->electron.provided) return QMCKL_NOT_PROVIDED;
@ -1818,7 +1818,7 @@ qmckl_exit_code qmckl_get_electron_en_distance(qmckl_context context, double* di
rc = qmckl_provide_en_distance(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.num * ctx->nucleus.num * ctx->electron.walk_num;
@ -1842,7 +1842,7 @@ qmckl_exit_code qmckl_provide_en_distance(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!(ctx->nucleus.provided)) {
@ -1905,7 +1905,7 @@ qmckl_exit_code qmckl_provide_en_distance(qmckl_context context)
| ~elec_num~ | ~int64_t~ | in | Number of electrons |
| ~nucl_num~ | ~int64_t~ | in | Number of nuclei |
| ~walk_num~ | ~int64_t~ | in | Number of walkers |
| ~elec_coord~ | ~double[walk_num][3][elec_num]~ | in | Electron coordinates |
| ~elec_coord~ | ~double[3][walk_num][elec_num]~ | in | Electron coordinates |
| ~nucl_coord~ | ~double[3][elec_num]~ | in | Nuclear coordinates |
| ~en_distance~ | ~double[walk_num][nucl_num][elec_num]~ | out | Electron-nucleus distances |
@ -2097,7 +2097,7 @@ qmckl_exit_code qmckl_get_electron_en_distance_rescaled(qmckl_context context, d
rc = qmckl_provide_en_distance_rescaled(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.num * ctx->nucleus.num * ctx->electron.walk_num;
@ -2121,7 +2121,7 @@ qmckl_exit_code qmckl_provide_en_distance_rescaled(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!(ctx->nucleus.provided)) {
@ -2183,7 +2183,7 @@ qmckl_exit_code qmckl_provide_en_distance_rescaled(qmckl_context context)
| ~nucl_num~ | ~int64_t~ | in | Number of nuclei |
| ~rescale_factor_kappa_en~ | ~double~ | in | The factor for rescaled distances |
| ~walk_num~ | ~int64_t~ | in | Number of walkers |
| ~elec_coord~ | ~double[walk_num][3][elec_num]~ | in | Electron coordinates |
| ~elec_coord~ | ~double[3][walk_num][elec_num]~ | in | Electron coordinates |
| ~nucl_coord~ | ~double[3][elec_num]~ | in | Nuclear coordinates |
| ~en_distance_rescaled~ | ~double[walk_num][nucl_num][elec_num]~ | out | Electron-nucleus distances |
@ -2385,7 +2385,7 @@ qmckl_exit_code qmckl_get_electron_en_distance_rescaled_deriv_e(qmckl_context co
rc = qmckl_provide_en_distance_rescaled_deriv_e(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = 4 * ctx->electron.num * ctx->nucleus.num * ctx->electron.walk_num;
@ -2409,7 +2409,7 @@ qmckl_exit_code qmckl_provide_en_distance_rescaled_deriv_e(qmckl_context context
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!(ctx->nucleus.provided)) {
@ -2471,9 +2471,9 @@ qmckl_exit_code qmckl_provide_en_distance_rescaled_deriv_e(qmckl_context context
| ~nucl_num~ | ~int64_t~ | in | Number of nuclei |
| ~rescale_factor_kappa_en~ | ~double~ | in | The factor for rescaled distances |
| ~walk_num~ | ~int64_t~ | in | Number of walkers |
| ~elec_coord~ | ~double[walk_num][3][elec_num]~ | in | Electron coordinates |
| ~elec_coord~ | ~double[3][walk_num][elec_num]~ | in | Electron coordinates |
| ~nucl_coord~ | ~double[3][elec_num]~ | in | Nuclear coordinates |
| ~en_distance_rescaled_deriv_e~ | ~double[walk_num][4][nucl_num][elec_num]~ | out | Electron-nucleus distance derivatives |
| ~en_distance_rescaled_deriv_e~ | ~double[walk_num][nucl_num][elec_num][4]~ | out | Electron-nucleus distance derivatives |
#+begin_src f90 :comments org :tangle (eval f) :noweb yes
integer function qmckl_compute_en_distance_rescaled_deriv_e_f(context, elec_num, nucl_num, &
@ -2656,7 +2656,7 @@ qmckl_exit_code qmckl_get_electron_en_potential(qmckl_context context, double* c
rc = qmckl_provide_en_potential(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.walk_num * sizeof(double);
@ -2680,7 +2680,7 @@ qmckl_exit_code qmckl_provide_en_potential(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->electron.provided) return QMCKL_NOT_PROVIDED;
@ -2843,7 +2843,7 @@ assert (rc == QMCKL_SUCCESS);
*** Compute :noexport:
# begin_src f90 :comments org :tangle (eval f) :noweb yes
# begin_src f90 :comments org :tangle (eval f) :noweb yes
subroutine draw_init_points
implicit none
BEGIN_DOC

120
org/qmckl_error.org
View File

@ -239,7 +239,7 @@ for (text, code, message) in table:
message = message.replace("'",'"')
result += [ f"""case {text}:
return {message};
break;""" ]
""" ]
return '\n'.join(result)
#+end_src
@ -247,89 +247,91 @@ return '\n'.join(result)
#+RESULTS: cases
#+begin_example
case QMCKL_SUCCESS:
return "Success";
break;
return "Success";
case QMCKL_INVALID_ARG_1:
return "Invalid argument 1";
break;
return "Invalid argument 1";
case QMCKL_INVALID_ARG_2:
return "Invalid argument 2";
break;
return "Invalid argument 2";
case QMCKL_INVALID_ARG_3:
return "Invalid argument 3";
break;
return "Invalid argument 3";
case QMCKL_INVALID_ARG_4:
return "Invalid argument 4";
break;
return "Invalid argument 4";
case QMCKL_INVALID_ARG_5:
return "Invalid argument 5";
break;
return "Invalid argument 5";
case QMCKL_INVALID_ARG_6:
return "Invalid argument 6";
break;
return "Invalid argument 6";
case QMCKL_INVALID_ARG_7:
return "Invalid argument 7";
break;
return "Invalid argument 7";
case QMCKL_INVALID_ARG_8:
return "Invalid argument 8";
break;
return "Invalid argument 8";
case QMCKL_INVALID_ARG_9:
return "Invalid argument 9";
break;
return "Invalid argument 9";
case QMCKL_INVALID_ARG_10:
return "Invalid argument 10";
break;
return "Invalid argument 10";
case QMCKL_INVALID_ARG_11:
return "Invalid argument 11";
break;
return "Invalid argument 11";
case QMCKL_INVALID_ARG_12:
return "Invalid argument 12";
break;
return "Invalid argument 12";
case QMCKL_INVALID_ARG_13:
return "Invalid argument 13";
break;
return "Invalid argument 13";
case QMCKL_INVALID_ARG_14:
return "Invalid argument 14";
break;
return "Invalid argument 14";
case QMCKL_INVALID_ARG_15:
return "Invalid argument 15";
break;
return "Invalid argument 15";
case QMCKL_INVALID_ARG_16:
return "Invalid argument 16";
break;
return "Invalid argument 16";
case QMCKL_INVALID_ARG_17:
return "Invalid argument 17";
break;
return "Invalid argument 17";
case QMCKL_INVALID_ARG_18:
return "Invalid argument 18";
break;
return "Invalid argument 18";
case QMCKL_INVALID_ARG_19:
return "Invalid argument 19";
break;
return "Invalid argument 19";
case QMCKL_INVALID_ARG_20:
return "Invalid argument 20";
break;
return "Invalid argument 20";
case QMCKL_FAILURE:
return "Failure";
break;
return "Failure";
case QMCKL_ERRNO:
return strerror(errno);
break;
return strerror(errno);
case QMCKL_INVALID_CONTEXT:
return "Invalid context";
break;
return "Invalid context";
case QMCKL_ALLOCATION_FAILED:
return "Allocation failed";
break;
return "Allocation failed";
case QMCKL_DEALLOCATION_FAILED:
return "De-allocation failed";
break;
return "De-allocation failed";
case QMCKL_NOT_PROVIDED:
return "Not provided";
break;
return "Not provided";
case QMCKL_OUT_OF_BOUNDS:
return "Index out of bounds";
case QMCKL_INVALID_EXIT_CODE:
return "Invalid exit code";
break;
return "Invalid exit code";
#+end_example
# Source
@ -414,7 +416,7 @@ qmckl_set_error(qmckl_context context,
qmckl_lock(context);
{
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL); /* Impossible because the context is valid. */
ctx->error.exit_code = exit_code;
@ -460,7 +462,7 @@ qmckl_get_error(qmckl_context context,
qmckl_lock(context);
{
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL); /* Impossible because the context is valid. */
/* Turn off annoying GCC warning */

3322
org/qmckl_jastrow.org
View File

File diff suppressed because it is too large Load Diff

83
org/qmckl_local_energy.org
View File

@ -226,7 +226,7 @@ qmckl_exit_code qmckl_get_kinetic_energy(qmckl_context context, double * const k
rc = qmckl_provide_kinetic_energy(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.walk_num * sizeof(double);
@ -250,7 +250,7 @@ qmckl_exit_code qmckl_provide_kinetic_energy(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -549,37 +549,28 @@ end function qmckl_compute_kinetic_energy_f
*** Test
#+begin_src c :tangle (eval c_test) :exports none
#define walk_num chbrclf_walk_num
#define elec_num chbrclf_elec_num
#define shell_num chbrclf_shell_num
#define ao_num chbrclf_ao_num
int64_t elec_up_num = chbrclf_elec_up_num;
int64_t elec_dn_num = chbrclf_elec_dn_num;
double* elec_coord = &(chbrclf_elec_coord[0][0][0]);
const int64_t nucl_num = chbrclf_nucl_num;
const double* nucl_charge = chbrclf_charge;
const double* nucl_coord = &(chbrclf_nucl_coord[0][0]);
rc = qmckl_set_electron_num (context, elec_up_num, elec_dn_num);
rc = qmckl_set_electron_num (context, chbrclf_elec_up_num, chbrclf_elec_dn_num);
assert (rc == QMCKL_SUCCESS);
rc = qmckl_set_electron_walk_num (context, walk_num);
rc = qmckl_set_electron_walk_num (context, chbrclf_walk_num);
assert (rc == QMCKL_SUCCESS);
assert(qmckl_electron_provided(context));
rc = qmckl_set_electron_coord (context, 'N', elec_coord, walk_num*elec_num*3);
rc = qmckl_set_electron_coord (context, 'N', elec_coord, chbrclf_walk_num*chbrclf_elec_num*3);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_nucleus_num (context, nucl_num);
rc = qmckl_set_nucleus_num (context, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_nucleus_coord (context, 'T', &(nucl_coord[0]), nucl_num*3);
rc = qmckl_set_nucleus_coord (context, 'T', &(nucl_coord[0]), chbrclf_nucl_num*3);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_nucleus_charge(context, nucl_charge, nucl_num);
rc = qmckl_set_nucleus_charge(context, nucl_charge, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(qmckl_nucleus_provided(context));
@ -611,11 +602,11 @@ rc = qmckl_set_ao_basis_prim_num (context, chbrclf_prim_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_nucleus_index (context, nucleus_index, nucl_num);
rc = qmckl_set_ao_basis_nucleus_index (context, nucleus_index, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
rc = qmckl_set_ao_basis_nucleus_shell_num (context, nucleus_shell_num, nucl_num);
rc = qmckl_set_ao_basis_nucleus_shell_num (context, nucleus_shell_num, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_ao_basis_provided(context));
@ -655,10 +646,10 @@ assert(rc == QMCKL_SUCCESS);
assert(qmckl_ao_basis_provided(context));
double ao_vgl[walk_num*elec_num][5][chbrclf_ao_num];
double ao_vgl[chbrclf_walk_num*chbrclf_elec_num][5][chbrclf_ao_num];
rc = qmckl_get_ao_basis_ao_vgl(context, &(ao_vgl[0][0][0]),
(int64_t) 5*walk_num*elec_num*chbrclf_ao_num);
(int64_t) 5*chbrclf_walk_num*chbrclf_elec_num*chbrclf_ao_num);
assert (rc == QMCKL_SUCCESS);
/* Set up MO data */
@ -673,31 +664,31 @@ assert (rc == QMCKL_SUCCESS);
assert(qmckl_mo_basis_provided(context));
double mo_vgl[walk_num*elec_num][5][chbrclf_mo_num];
rc = qmckl_get_mo_basis_mo_vgl(context, &(mo_vgl[0][0][0]), 5*walk_num*elec_num*chbrclf_mo_num);
double mo_vgl[chbrclf_walk_num*chbrclf_elec_num][5][chbrclf_mo_num];
rc = qmckl_get_mo_basis_mo_vgl(context, &(mo_vgl[0][0][0]), 5*chbrclf_walk_num*chbrclf_elec_num*chbrclf_mo_num);
assert (rc == QMCKL_SUCCESS);
/* Set up determinant data */
const int64_t det_num_alpha = 1;
const int64_t det_num_beta = 1;
int64_t mo_index_alpha[det_num_alpha][walk_num][elec_up_num];
int64_t mo_index_beta[det_num_alpha][walk_num][elec_dn_num];
#define det_num_alpha 1
#define det_num_beta 1
int64_t mo_index_alpha[det_num_alpha][chbrclf_walk_num][chbrclf_elec_up_num];
int64_t mo_index_beta[det_num_alpha][chbrclf_walk_num][chbrclf_elec_dn_num];
int i, j, k;
for(k = 0; k < det_num_alpha; ++k)
for(i = 0; i < walk_num; ++i)
for(j = 0; j < elec_up_num; ++j)
for(i = 0; i < chbrclf_walk_num; ++i)
for(j = 0; j < chbrclf_elec_up_num; ++j)
mo_index_alpha[k][i][j] = j + 1;
for(k = 0; k < det_num_beta; ++k)
for(i = 0; i < walk_num; ++i)
for(j = 0; j < elec_up_num; ++j)
for(i = 0; i < chbrclf_walk_num; ++i)
for(j = 0; j < chbrclf_elec_up_num; ++j)
mo_index_beta[k][i][j] = j + 1;
rc = qmckl_set_determinant_type (context, typ);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_set_determinant_walk_num (context, walk_num);
rc = qmckl_set_determinant_walk_num (context, chbrclf_walk_num);
assert (rc == QMCKL_SUCCESS);
rc = qmckl_set_determinant_det_num_alpha (context, det_num_alpha);
@ -714,8 +705,8 @@ assert (rc == QMCKL_SUCCESS);
// Get alpha determinant
double det_vgl_alpha[det_num_alpha][walk_num][5][elec_up_num][elec_up_num];
double det_vgl_beta[det_num_beta][walk_num][5][elec_dn_num][elec_dn_num];
double det_vgl_alpha[det_num_alpha][chbrclf_walk_num][5][chbrclf_elec_up_num][chbrclf_elec_up_num];
double det_vgl_beta[det_num_beta][chbrclf_walk_num][5][chbrclf_elec_dn_num][chbrclf_elec_dn_num];
rc = qmckl_get_det_vgl_alpha(context, &(det_vgl_alpha[0][0][0][0][0]));
assert (rc == QMCKL_SUCCESS);
@ -725,8 +716,8 @@ assert (rc == QMCKL_SUCCESS);
// Get adjoint of the slater-determinant
double det_inv_matrix_alpha[det_num_alpha][walk_num][elec_up_num][elec_up_num];
double det_inv_matrix_beta[det_num_beta][walk_num][elec_dn_num][elec_dn_num];
double det_inv_matrix_alpha[det_num_alpha][chbrclf_walk_num][chbrclf_elec_up_num][chbrclf_elec_up_num];
double det_inv_matrix_beta[det_num_beta][chbrclf_walk_num][chbrclf_elec_dn_num][chbrclf_elec_dn_num];
rc = qmckl_get_det_inv_matrix_alpha(context, &(det_inv_matrix_alpha[0][0][0][0]));
assert (rc == QMCKL_SUCCESS);
@ -736,7 +727,7 @@ assert (rc == QMCKL_SUCCESS);
// Calculate the Kinetic energy
double kinetic_energy[walk_num];
double kinetic_energy[chbrclf_walk_num];
rc = qmckl_get_kinetic_energy(context, &(kinetic_energy[0]));
assert (rc == QMCKL_SUCCESS);
@ -799,7 +790,7 @@ qmckl_exit_code qmckl_get_potential_energy(qmckl_context context, double * const
rc = qmckl_provide_potential_energy(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.walk_num * sizeof(double);
@ -822,7 +813,7 @@ qmckl_exit_code qmckl_provide_potential_energy(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
qmckl_exit_code rc;
@ -1034,7 +1025,7 @@ end function qmckl_compute_potential_energy_f
#+begin_src c :tangle (eval c_test) :exports none
// Calculate the Potential energy
double potential_energy[walk_num];
double potential_energy[chbrclf_walk_num];
rc = qmckl_get_potential_energy(context, &(potential_energy[0]));
assert (rc == QMCKL_SUCCESS);
@ -1083,7 +1074,7 @@ qmckl_exit_code qmckl_get_local_energy(qmckl_context context, double * const loc
rc = qmckl_provide_local_energy(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->electron.walk_num;
@ -1112,7 +1103,7 @@ qmckl_exit_code qmckl_provide_local_energy(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -1296,7 +1287,7 @@ end function qmckl_compute_local_energy_f
#+begin_src c :tangle (eval c_test) :exports none
// Calculate the Local energy
double local_energy[walk_num];
double local_energy[chbrclf_walk_num];
rc = qmckl_get_local_energy(context, &(local_energy[0]), walk_num);
assert (rc == QMCKL_SUCCESS);
@ -1345,7 +1336,7 @@ qmckl_exit_code qmckl_get_drift_vector(qmckl_context context, double * const dri
rc = qmckl_provide_drift_vector(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
size_t sze = ctx->electron.walk_num * ctx->electron.num * 3 * sizeof(double);
@ -1368,7 +1359,7 @@ qmckl_exit_code qmckl_provide_drift_vector(qmckl_context context) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if(!(ctx->nucleus.provided)) {
@ -1651,7 +1642,7 @@ end function qmckl_compute_drift_vector_f
#+begin_src c :tangle (eval c_test) :exports none
// Calculate the Drift vector
double drift_vector[walk_num][elec_num][3];
double drift_vector[chbrclf_walk_num][chbrclf_elec_num][3];
rc = qmckl_get_drift_vector(context, &(drift_vector[0][0][0]));
assert (rc == QMCKL_SUCCESS);

4
org/qmckl_memory.org
View File

@ -116,7 +116,7 @@ void* qmckl_malloc(qmckl_context context, const qmckl_memory_info_struct info) {
assert (qmckl_context_check(context) != QMCKL_NULL_CONTEXT);
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
/* Allocate memory and zero it */
void * pointer = malloc(info.size);
@ -217,7 +217,7 @@ qmckl_exit_code qmckl_free(qmckl_context context, void * const ptr) {
"NULL pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
qmckl_lock(context);
{

608
org/qmckl_mo.org
View File

@ -92,10 +92,12 @@ int main() {
Computed data:
|---------------+--------------------------+-------------------------------------------------------------------------------------|
| ~mo_vgl~ | ~[point_num][5][mo_num]~ | Value, gradients, Laplacian of the MOs at point positions |
| ~mo_vgl_date~ | ~uint64_t~ | Late modification date of Value, gradients, Laplacian of the MOs at point positions |
|---------------+--------------------------+-------------------------------------------------------------------------------------|
|-----------------+--------------------------+-------------------------------------------------------------------------------------|
| ~mo_value~ | ~[point_num][mo_num]~ | Value of the MOs at point positions |
| ~mo_value_date~ | ~uint64_t~ | Late modification date of the value of the MOs at point positions |
| ~mo_vgl~ | ~[point_num][5][mo_num]~ | Value, gradients, Laplacian of the MOs at point positions |
| ~mo_vgl_date~ | ~uint64_t~ | Late modification date of Value, gradients, Laplacian of the MOs at point positions |
|-----------------+--------------------------+-------------------------------------------------------------------------------------|
** Data structure
@ -106,7 +108,9 @@ typedef struct qmckl_mo_basis_struct {
double * restrict coefficient_t;
double * restrict mo_vgl;
double * restrict mo_value;
uint64_t mo_vgl_date;
uint64_t mo_value_date;
int32_t uninitialized;
bool provided;
@ -131,7 +135,7 @@ qmckl_exit_code qmckl_init_mo_basis(qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
ctx->mo_basis.uninitialized = (1 << 2) - 1;
@ -158,10 +162,9 @@ qmckl_get_mo_basis_mo_num (const qmckl_context context,
QMCKL_INVALID_CONTEXT,
"qmckl_get_mo_basis_mo_num",
NULL);
return (int64_t) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1;
@ -200,7 +203,7 @@ qmckl_get_mo_basis_coefficient (const qmckl_context context,
NULL);
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 1;
@ -248,7 +251,7 @@ bool qmckl_mo_basis_provided(const qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
return ctx->mo_basis.provided;
@ -257,10 +260,8 @@ bool qmckl_mo_basis_provided(const qmckl_context context) {
#+end_src
*** Fortran interfaces
#+begin_src f90 :tangle (eval fh_func) :comments org
interface
integer(c_int32_t) function qmckl_get_mo_basis_mo_num (context, &
mo_num) bind(C)
@ -280,7 +281,7 @@ interface
implicit none
integer (c_int64_t) , intent(in) , value :: context
double precision, intent(out) :: coefficient(*)
integer (c_int64_t) , intent(in) , value :: size_max
integer (c_int64_t) , intent(int), value :: size_max
end function qmckl_get_mo_basis_coefficient
end interface
@ -302,7 +303,7 @@ if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
#+end_src
#+NAME:post
@ -383,7 +384,7 @@ qmckl_exit_code qmckl_finalize_mo_basis(qmckl_context context) {
NULL);
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
qmckl_memory_info_struct mem_info = qmckl_memory_info_struct_zero;
@ -421,7 +422,464 @@ qmckl_exit_code qmckl_finalize_mo_basis(qmckl_context context) {
* Computation
** Computation of MOs
** Computation of MOs: values only
*** Get
#+begin_src c :comments org :tangle (eval h_func) :noweb yes
qmckl_exit_code
qmckl_get_mo_basis_mo_value(qmckl_context context,
double* const mo_value,
const int64_t size_max);
#+end_src
#+begin_src c :comments org :tangle (eval c) :noweb yes :exports none
qmckl_exit_code
qmckl_get_mo_basis_mo_value(qmckl_context context,
double* const mo_value,
const int64_t size_max)
{
if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return QMCKL_NULL_CONTEXT;
}
qmckl_exit_code rc;
rc = qmckl_provide_ao_value(context);
if (rc != QMCKL_SUCCESS) return rc;
rc = qmckl_provide_mo_value(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->point.num * ctx->mo_basis.mo_num;
if (size_max < sze) {
return qmckl_failwith( context,
QMCKL_INVALID_ARG_3,
"qmckl_get_mo_basis_mo_value",
"input array too small");
}
memcpy(mo_value, ctx->mo_basis.mo_value, sze * sizeof(double));
return QMCKL_SUCCESS;
}
#+end_src
#+begin_src f90 :tangle (eval fh_func) :comments org :exports none
interface
integer(c_int32_t) function qmckl_get_mo_basis_mo_value (context, &
mo_value, size_max) bind(C)
use, intrinsic :: iso_c_binding
import
implicit none
integer (c_int64_t) , intent(in) , value :: context
double precision, intent(out) :: mo_value(*)
integer (c_int64_t) , intent(in) , value :: size_max
end function qmckl_get_mo_basis_mo_value
end interface
#+end_src
Uses the given array to compute the values.
#+begin_src c :comments org :tangle (eval h_func) :noweb yes
qmckl_exit_code
qmckl_get_mo_basis_mo_value_inplace (qmckl_context context,
double* const mo_value,
const int64_t size_max);
#+end_src
#+begin_src c :comments org :tangle (eval c) :noweb yes :exports none
qmckl_exit_code
qmckl_get_mo_basis_mo_value_inplace (qmckl_context context,
double* const mo_value,
const int64_t size_max)
{
if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return qmckl_failwith( context,
QMCKL_INVALID_CONTEXT,
"qmckl_get_mo_basis_mo_value",
NULL);
}
qmckl_exit_code rc;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->mo_basis.mo_num * ctx->point.num;
if (size_max < sze) {
return qmckl_failwith( context,
QMCKL_INVALID_ARG_3,
"qmckl_get_mo_basis_mo_value",
"input array too small");
}
rc = qmckl_context_touch(context);
if (rc != QMCKL_SUCCESS) return rc;
double* old_array = ctx->mo_basis.mo_value;
ctx->mo_basis.mo_value = mo_value;
rc = qmckl_provide_mo_value(context);
if (rc != QMCKL_SUCCESS) return rc;
ctx->mo_basis.mo_value = old_array;
return QMCKL_SUCCESS;
}
#+end_src
#+begin_src f90 :tangle (eval fh_func) :comments org :exports none
interface
integer(c_int32_t) function qmckl_get_mo_basis_mo_value_inplace (context, &
mo_value, size_max) bind(C)
use, intrinsic :: iso_c_binding
import
implicit none
integer (c_int64_t) , intent(in) , value :: context
double precision, intent(out) :: mo_value(*)
integer (c_int64_t) , intent(in) , value :: size_max
end function qmckl_get_mo_basis_mo_value_inplace
end interface
#+end_src
*** Provide
#+begin_src c :comments org :tangle (eval h_private_func) :noweb yes :exports none
qmckl_exit_code qmckl_provide_mo_value(qmckl_context context);
#+end_src
#+begin_src c :comments org :tangle (eval c) :noweb yes :exports none
qmckl_exit_code qmckl_provide_mo_value(qmckl_context context)
{
qmckl_exit_code rc;
if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->ao_basis.provided) {
return qmckl_failwith( context,
QMCKL_NOT_PROVIDED,
"qmckl_ao_basis",
NULL);
}
rc = qmckl_provide_ao_value(context);
if (rc != QMCKL_SUCCESS) {
return qmckl_failwith( context,
QMCKL_NOT_PROVIDED,
"qmckl_ao_value",
NULL);
}
if (!ctx->mo_basis.provided) {
return qmckl_failwith( context,
QMCKL_NOT_PROVIDED,
"qmckl_mo_basis",
NULL);
}
/* Compute if necessary */
if (ctx->point.date > ctx->mo_basis.mo_value_date) {
/* Allocate array */
if (ctx->mo_basis.mo_value == NULL) {
qmckl_memory_info_struct mem_info = qmckl_memory_info_struct_zero;
mem_info.size = ctx->point.num * ctx->mo_basis.mo_num * sizeof(double);
double* mo_value = (double*) qmckl_malloc(context, mem_info);
if (mo_value == NULL) {
return qmckl_failwith( context,
QMCKL_ALLOCATION_FAILED,
"qmckl_mo_basis_mo_value",
NULL);
}
ctx->mo_basis.mo_value = mo_value;
}
if (ctx->mo_basis.mo_vgl_date == ctx->point.date) {
// mo_vgl has been computed at this step: Just copy the data.
double * v = &(ctx->mo_basis.mo_value[0]);
double * vgl = &(ctx->mo_basis.mo_vgl[0]);
for (int i=0 ; i<ctx->point.num ; ++i) {
for (int k=0 ; k<ctx->mo_basis.mo_num ; ++k) {
v[k] = vgl[k];
}
v += ctx->mo_basis.mo_num;
vgl += ctx->mo_basis.mo_num * 5;
}
} else {
rc = qmckl_compute_mo_basis_mo_value(context,
ctx->ao_basis.ao_num,
ctx->mo_basis.mo_num,
ctx->point.num,
ctx->mo_basis.coefficient_t,
ctx->ao_basis.ao_value,
ctx->mo_basis.mo_value);
if (rc != QMCKL_SUCCESS) {
return rc;
}
}
ctx->mo_basis.mo_value_date = ctx->date;
}
return QMCKL_SUCCESS;
}
#+end_src
*** Compute
:PROPERTIES:
:Name: qmckl_compute_mo_basis_mo_value
:CRetType: qmckl_exit_code
:FRetType: qmckl_exit_code
:END:
#+NAME: qmckl_mo_basis_mo_value_args
| Variable | Type | In/Out | Description |
|---------------------+-----------------------------+--------+-------------------------------------------------|
| ~context~ | ~qmckl_context~ | in | Global state |
| ~ao_num~ | ~int64_t~ | in | Number of AOs |
| ~mo_num~ | ~int64_t~ | in | Number of MOs |
| ~point_num~ | ~int64_t~ | in | Number of points |
| ~coef_normalized_t~ | ~double[mo_num][ao_num]~ | in | Transpose of the AO to MO transformation matrix |
| ~ao_value~ | ~double[point_num][ao_num]~ | in | Value of the AOs |
| ~mo_value~ | ~double[point_num][mo_num]~ | out | Value of the MOs |
The matrix of AO values is very sparse, so we use a sparse-dense
matrix multiplication instead of a dgemm, as exposed in
https://dx.doi.org/10.1007/978-3-642-38718-0_14.
#+begin_src f90 :comments org :tangle (eval f) :noweb yes
integer function qmckl_compute_mo_basis_mo_value_doc_f(context, &
ao_num, mo_num, point_num, &
coef_normalized_t, ao_value, mo_value) &
result(info)
use qmckl
implicit none
integer(qmckl_context), intent(in) :: context
integer*8 , intent(in) :: ao_num, mo_num
integer*8 , intent(in) :: point_num
double precision , intent(in) :: ao_value(ao_num,point_num)
double precision , intent(in) :: coef_normalized_t(mo_num,ao_num)
double precision , intent(out) :: mo_value(mo_num,point_num)
integer*8 :: i,j,k
double precision :: c1, c2, c3, c4, c5
integer*8 :: LDA, LDB, LDC
info = QMCKL_SUCCESS
if (.True.) then ! fast algorithm
do j=1,point_num
mo_value(:,j) = 0.d0
do k=1,ao_num
if (ao_value(k,j) /= 0.d0) then
c1 = ao_value(k,j)
do i=1,mo_num
mo_value(i,j) = mo_value(i,j) + coef_normalized_t(i,k) * c1
end do
end if
end do
end do
else ! dgemm
LDA = size(coef_normalized_t,1)
LDB = size(ao_value,1)
LDC = size(mo_value,1)
info = qmckl_dgemm(context,'N', 'N', mo_num, point_num, ao_num, 1.d0, &
coef_normalized_t, LDA, ao_value, LDB, &
0.d0, mo_value, LDC)
end if
end function qmckl_compute_mo_basis_mo_value_doc_f
#+end_src
#+CALL: generate_c_header(table=qmckl_mo_basis_mo_value_args,rettyp=get_value("CRetType"),fname="qmckl_compute_mo_basis_mo_value"))
#+RESULTS:
#+begin_src c :tangle (eval h_func) :comments org
qmckl_exit_code qmckl_compute_mo_basis_mo_value (
const qmckl_context context,
const int64_t ao_num,
const int64_t mo_num,
const int64_t point_num,
const double* coef_normalized_t,
const double* ao_value,
double* const mo_value );
#+end_src
#+CALL: generate_c_header(table=qmckl_mo_basis_mo_value_args,rettyp=get_value("CRetType"),fname="qmckl_compute_mo_basis_mo_value_doc"))
#+RESULTS:
#+begin_src c :tangle (eval h_func) :comments org
qmckl_exit_code qmckl_compute_mo_basis_mo_value_doc (
const qmckl_context context,
const int64_t ao_num,
const int64_t mo_num,
const int64_t point_num,
const double* coef_normalized_t,
const double* ao_value,
double* const mo_value );
#+end_src
#+CALL: generate_c_interface(table=qmckl_mo_basis_mo_value_args,rettyp=get_value("CRetType"),fname="qmckl_compute_mo_basis_mo_value_doc"))
#+RESULTS:
#+begin_src f90 :tangle (eval f) :comments org :exports none
integer(c_int32_t) function qmckl_compute_mo_basis_mo_value_doc &
(context, ao_num, mo_num, point_num, coef_normalized_t, ao_value, mo_value) &
bind(C) result(info)
use, intrinsic :: iso_c_binding
implicit none
integer (c_int64_t) , intent(in) , value :: context
integer (c_int64_t) , intent(in) , value :: ao_num
integer (c_int64_t) , intent(in) , value :: mo_num
integer (c_int64_t) , intent(in) , value :: point_num
real (c_double ) , intent(in) :: coef_normalized_t(ao_num,mo_num)
real (c_double ) , intent(in) :: ao_value(ao_num,point_num)
real (c_double ) , intent(out) :: mo_value(mo_num,point_num)
integer(c_int32_t), external :: qmckl_compute_mo_basis_mo_value_doc_f
info = qmckl_compute_mo_basis_mo_value_doc_f &
(context, ao_num, mo_num, point_num, coef_normalized_t, ao_value, mo_value)
end function qmckl_compute_mo_basis_mo_value_doc
#+end_src
#+begin_src c :tangle (eval c) :comments org
qmckl_exit_code
qmckl_compute_mo_basis_mo_value (const qmckl_context context,
const int64_t ao_num,
const int64_t mo_num,
const int64_t point_num,
const double* coef_normalized_t,
const double* ao_value,
double* const mo_value )
{
#ifdef HAVE_HPC
return qmckl_compute_mo_basis_mo_value_hpc (context, ao_num, mo_num, point_num, coef_normalized_t, ao_value, mo_value);
#else
return qmckl_compute_mo_basis_mo_value_doc (context, ao_num, mo_num, point_num, coef_normalized_t, ao_value, mo_value);
#endif
}
#+end_src
*** HPC version
#+begin_src c :tangle (eval h_func) :comments org
#ifdef HAVE_HPC
qmckl_exit_code
qmckl_compute_mo_basis_mo_value_hpc (const qmckl_context context,
const int64_t ao_num,
const int64_t mo_num,
const int64_t point_num,
const double* coef_normalized_t,
const double* ao_value,
double* const mo_value );
#endif
#+end_src
#+begin_src c :tangle (eval c) :comments org
#ifdef HAVE_HPC
qmckl_exit_code
qmckl_compute_mo_basis_mo_value_hpc (const qmckl_context context,
const int64_t ao_num,
const int64_t mo_num,
const int64_t point_num,
const double* restrict coef_normalized_t,
const double* restrict ao_value,
double* restrict const mo_value )
{
assert (context != QMCKL_NULL_CONTEXT);
#ifdef HAVE_OPENMP
#pragma omp parallel for
#endif
for (int64_t ipoint=0 ; ipoint < point_num ; ++ipoint) {
double* restrict const vgl1 = &(mo_value[ipoint*mo_num]);
const double* restrict avgl1 = &(ao_value[ipoint*ao_num]);
for (int64_t i=0 ; i<mo_num ; ++i) {
vgl1[i] = 0.;
}
int64_t nidx=0;
int64_t idx[ao_num];
double av1[ao_num];
for (int64_t k=0 ; k<ao_num ; ++k) {
if (avgl1[k] != 0.) {
idx[nidx] = k;
av1[nidx] = avgl1[k];
++nidx;
}
}
int64_t n;
for (n=0 ; n < nidx-4 ; n+=4) {
const double* restrict ck1 = coef_normalized_t + idx[n ]*mo_num;
const double* restrict ck2 = coef_normalized_t + idx[n+1]*mo_num;
const double* restrict ck3 = coef_normalized_t + idx[n+2]*mo_num;
const double* restrict ck4 = coef_normalized_t + idx[n+3]*mo_num;
const double a11 = av1[n ];
const double a21 = av1[n+1];
const double a31 = av1[n+2];
const double a41 = av1[n+3];
#ifdef HAVE_OPENMP
#pragma omp simd
#endif
for (int64_t i=0 ; i<mo_num ; ++i) {
vgl1[i] = vgl1[i] + ck1[i] * a11 + ck2[i] * a21 + ck3[i] * a31 + ck4[i] * a41;
}
}
const int64_t n0 = n < 0 ? 0 : n;
for (int64_t m=n0 ; m < nidx ; m+=1) {
const double* restrict ck = coef_normalized_t + idx[m]*mo_num;
const double a1 = av1[m];
#ifdef HAVE_OPENMP
#pragma omp simd
#endif
for (int64_t i=0 ; i<mo_num ; ++i) {
vgl1[i] += ck[i] * a1;
}
}
}
return QMCKL_SUCCESS;
}
#endif
#+end_src
** Computation of MOs: values, gradient, Laplacian
*** Get
@ -451,7 +909,7 @@ qmckl_get_mo_basis_mo_vgl(qmckl_context context,
rc = qmckl_provide_mo_vgl(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->point.num * 5 * ctx->mo_basis.mo_num;
@ -507,7 +965,7 @@ qmckl_get_mo_basis_mo_vgl_inplace (qmckl_context context,
qmckl_exit_code rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->mo_basis.mo_num * 5 * ctx->point.num;
@ -563,7 +1021,7 @@ qmckl_exit_code qmckl_provide_mo_vgl(qmckl_context context)
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->ao_basis.provided) {
@ -666,25 +1124,41 @@ integer function qmckl_compute_mo_basis_mo_vgl_doc_f(context, &
integer*8 :: i,j,k
double precision :: c1, c2, c3, c4, c5
do j=1,point_num
mo_vgl(:,:,j) = 0.d0
do k=1,ao_num
if (ao_vgl(k,1,j) /= 0.d0) then
c1 = ao_vgl(k,1,j)
c2 = ao_vgl(k,2,j)
c3 = ao_vgl(k,3,j)
c4 = ao_vgl(k,4,j)
c5 = ao_vgl(k,5,j)
do i=1,mo_num
mo_vgl(i,1,j) = mo_vgl(i,1,j) + coef_normalized_t(i,k) * c1
mo_vgl(i,2,j) = mo_vgl(i,2,j) + coef_normalized_t(i,k) * c2
mo_vgl(i,3,j) = mo_vgl(i,3,j) + coef_normalized_t(i,k) * c3
mo_vgl(i,4,j) = mo_vgl(i,4,j) + coef_normalized_t(i,k) * c4
mo_vgl(i,5,j) = mo_vgl(i,5,j) + coef_normalized_t(i,k) * c5
end do
end if
integer*8 :: LDA, LDB, LDC
info = QMCKL_SUCCESS
if (.True.) then ! fast algorithm
do j=1,point_num
mo_vgl(:,:,j) = 0.d0
do k=1,ao_num
if (ao_vgl(k,1,j) /= 0.d0) then
c1 = ao_vgl(k,1,j)
c2 = ao_vgl(k,2,j)
c3 = ao_vgl(k,3,j)
c4 = ao_vgl(k,4,j)
c5 = ao_vgl(k,5,j)
do i=1,mo_num
mo_vgl(i,1,j) = mo_vgl(i,1,j) + coef_normalized_t(i,k) * c1
mo_vgl(i,2,j) = mo_vgl(i,2,j) + coef_normalized_t(i,k) * c2
mo_vgl(i,3,j) = mo_vgl(i,3,j) + coef_normalized_t(i,k) * c3
mo_vgl(i,4,j) = mo_vgl(i,4,j) + coef_normalized_t(i,k) * c4
mo_vgl(i,5,j) = mo_vgl(i,5,j) + coef_normalized_t(i,k) * c5
end do
end if
end do
end do
end do
else ! dgemm
LDA = size(coef_normalized_t,1)
LDB = size(ao_vgl,1)
LDC = size(mo_vgl,1)
info = qmckl_dgemm(context,'N', 'N', mo_num, point_num*5_8, ao_num*1_8, 1.d0, &
coef_normalized_t, LDA, ao_vgl, LDB, &
0.d0, mo_vgl, LDC)
end if
end function qmckl_compute_mo_basis_mo_vgl_doc_f
#+end_src
@ -761,7 +1235,6 @@ qmckl_compute_mo_basis_mo_vgl (const qmckl_context context,
}
#+end_src
*** HPC version
@ -789,16 +1262,19 @@ qmckl_compute_mo_basis_mo_vgl_hpc (const qmckl_context context,
const double* restrict ao_vgl,
double* restrict const mo_vgl )
{
assert (context != QMCKL_NULL_CONTEXT);
#ifdef HAVE_OPENMP
#pragma omp parallel for
#endif
for (int64_t ipoint=0 ; ipoint < point_num ; ++ipoint) {
double* restrict const vgl1 = &(mo_vgl[ipoint*5*mo_num]);
const double* restrict avgl1 = &(ao_vgl[ipoint*5*ao_num]);
double* restrict const vgl2 = vgl1 + mo_num;
double* restrict const vgl3 = vgl1 + (mo_num << 1);
double* restrict const vgl4 = vgl1 + (mo_num << 1) + mo_num;
double* restrict const vgl5 = vgl1 + (mo_num << 2);
const double* restrict avgl1 = &(ao_vgl[ipoint*5*ao_num]);
const double* restrict avgl2 = avgl1 + ao_num;
const double* restrict avgl3 = avgl1 + (ao_num << 1);
const double* restrict avgl4 = avgl1 + (ao_num << 1) + ao_num;
@ -820,7 +1296,6 @@ qmckl_compute_mo_basis_mo_vgl_hpc (const qmckl_context context,
double av4[ao_num];
double av5[ao_num];
for (int64_t k=0 ; k<ao_num ; ++k) {
const double* restrict ck1 = coef_normalized_t + k*mo_num;
if (avgl1[k] != 0.) {
idx[nidx] = k;
av1[nidx] = avgl1[k];
@ -833,8 +1308,8 @@ qmckl_compute_mo_basis_mo_vgl_hpc (const qmckl_context context,
}
int64_t n;
for (n=0 ; n < nidx-4 ; n+=4) {
int64_t k = idx[n];
const double* restrict ck1 = coef_normalized_t + idx[n ]*mo_num;
const double* restrict ck2 = coef_normalized_t + idx[n+1]*mo_num;
const double* restrict ck3 = coef_normalized_t + idx[n+2]*mo_num;
@ -877,15 +1352,14 @@ qmckl_compute_mo_basis_mo_vgl_hpc (const qmckl_context context,
}
}
int64_t n0 = nidx-4;
n0 = n0 < 0 ? 0 : n0;
for (int64_t n=n0 ; n < nidx ; n+=1) {
const double* restrict ck = coef_normalized_t + idx[n]*mo_num;
const double a1 = av1[n];
const double a2 = av2[n];
const double a3 = av3[n];
const double a4 = av4[n];
const double a5 = av5[n];
const int64_t n0 = n < 0 ? 0 : n;
for (int64_t m=n0 ; m < nidx ; m+=1) {
const double* restrict ck = coef_normalized_t + idx[m]*mo_num;
const double a1 = av1[m];
const double a2 = av2[m];
const double a3 = av3[m];
const double a4 = av4[m];
const double a5 = av5[m];
#ifdef HAVE_OPENMP
#pragma omp simd
@ -904,9 +1378,9 @@ qmckl_compute_mo_basis_mo_vgl_hpc (const qmckl_context context,
#endif
#+end_src
*** Test
** Test
#+begin_src python :results output :exports none
#+begin_src python :results output :exports none
import numpy as np
def f(a,x,y):
@ -966,9 +1440,9 @@ print ( "[2][1][15][14] : %25.15e"% df(a,x,y,2))
print ( "[3][1][15][14] : %25.15e"% df(a,x,y,3))
print ( "[4][1][15][14] : %25.15e"% lf(a,x,y))
#+end_src
#+end_src
#+begin_src c :tangle (eval c_test) :exports none
#+begin_src c :tangle (eval c_test) :exports none
{
#define walk_num chbrclf_walk_num
#define elec_num chbrclf_elec_num
@ -1093,10 +1567,36 @@ assert (rc == QMCKL_SUCCESS);
assert(qmckl_mo_basis_provided(context));
rc = qmckl_context_touch(context);
assert (rc == QMCKL_SUCCESS);
double mo_value[walk_num*elec_num][chbrclf_mo_num];
rc = qmckl_get_mo_basis_mo_value(context, &(mo_value[0][0]), walk_num*elec_num*chbrclf_mo_num);
assert (rc == QMCKL_SUCCESS);
double mo_vgl[walk_num*elec_num][5][chbrclf_mo_num];
rc = qmckl_get_mo_basis_mo_vgl(context, &(mo_vgl[0][0][0]), walk_num*elec_num*5*chbrclf_mo_num);
assert (rc == QMCKL_SUCCESS);
for (int i=0 ; i< walk_num*elec_num; ++i) {
for (int k=0 ; k< chbrclf_mo_num ; ++k) {
assert(fabs(mo_vgl[i][0][k] - mo_value[i][k]) < 1.e-12) ;
}
}
rc = qmckl_context_touch(context);
assert (rc == QMCKL_SUCCESS);
rc = qmckl_get_mo_basis_mo_value(context, &(mo_value[0][0]), walk_num*elec_num*chbrclf_mo_num);
assert (rc == QMCKL_SUCCESS);
for (int i=0 ; i< walk_num*elec_num; ++i) {
for (int k=0 ; k< chbrclf_mo_num ; ++k) {
assert(fabs(mo_vgl[i][0][k] - mo_value[i][k]) < 1.e-12) ;
}
}
// Test overlap of MO
//double point_x[10];
//double point_y[10];
@ -1154,7 +1654,7 @@ printf(" mo_vgl mo_vgl[1][26][224] %25.15e\n", mo_vgl[2][1][3]);
printf("\n");
}
#+end_src
#+end_src
* End of files :noexport:

63
org/qmckl_nucleus.org
View File

@ -125,7 +125,7 @@ qmckl_exit_code qmckl_init_nucleus(qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
ctx->nucleus.uninitialized = (1 << 3) - 1;
@ -167,7 +167,7 @@ qmckl_get_nucleus_num (const qmckl_context context, int64_t* const num) {
"num is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 0;
@ -226,7 +226,7 @@ qmckl_get_nucleus_charge (const qmckl_context context,
"charge is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 1;
@ -293,7 +293,7 @@ qmckl_get_nucleus_rescale_factor (const qmckl_context context,
"rescale_factor_kappa is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
assert (ctx->nucleus.rescale_factor_kappa > 0.0);
@ -351,7 +351,7 @@ qmckl_get_nucleus_coord (const qmckl_context context,
"coord is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int32_t mask = 1 << 2;
@ -410,7 +410,7 @@ bool qmckl_nucleus_provided(const qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
return ctx->nucleus.provided;
@ -425,7 +425,7 @@ if (qmckl_context_check(context) == QMCKL_NULL_CONTEXT) {
return QMCKL_NULL_CONTEXT;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
#+end_src
#+NAME:post2
@ -672,7 +672,6 @@ end interface
** Test
#+begin_src c :tangle (eval c_test)
const int64_t nucl_num = chbrclf_nucl_num;
const double* nucl_charge = chbrclf_charge;
const double* nucl_coord = &(chbrclf_nucl_coord[0][0]);
const double nucl_rescale_factor_kappa = 2.0;
@ -688,13 +687,13 @@ rc = qmckl_get_nucleus_num (context, &n);
assert(rc == QMCKL_NOT_PROVIDED);
rc = qmckl_set_nucleus_num (context, nucl_num);
rc = qmckl_set_nucleus_num (context, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_nucleus_provided(context));
rc = qmckl_get_nucleus_num (context, &n);
assert(rc == QMCKL_SUCCESS);
assert(n == nucl_num);
assert(n == chbrclf_nucl_num);
double k;
rc = qmckl_get_nucleus_rescale_factor (context, &k);
@ -709,41 +708,41 @@ rc = qmckl_get_nucleus_rescale_factor (context, &k);
assert(rc == QMCKL_SUCCESS);
assert(k == nucl_rescale_factor_kappa);
double nucl_coord2[3*nucl_num];
double nucl_coord2[3*chbrclf_nucl_num];
rc = qmckl_get_nucleus_coord (context, 'T', nucl_coord2, 3*nucl_num);
rc = qmckl_get_nucleus_coord (context, 'T', nucl_coord2, 3*chbrclf_nucl_num);
assert(rc == QMCKL_NOT_PROVIDED);
rc = qmckl_set_nucleus_coord (context, 'T', &(nucl_coord[0]), 3*nucl_num);
rc = qmckl_set_nucleus_coord (context, 'T', &(nucl_coord[0]), 3*chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
assert(!qmckl_nucleus_provided(context));
rc = qmckl_get_nucleus_coord (context, 'N', nucl_coord2, 3*nucl_num);
rc = qmckl_get_nucleus_coord (context, 'N', nucl_coord2, 3*chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
for (size_t k=0 ; k<3 ; ++k) {
for (int64_t i=0 ; i<nucl_num ; ++i) {
assert( nucl_coord[nucl_num*k+i] == nucl_coord2[3*i+k] );
for (int64_t i=0 ; i<chbrclf_nucl_num ; ++i) {
assert( nucl_coord[chbrclf_nucl_num*k+i] == nucl_coord2[3*i+k] );
}
}
rc = qmckl_get_nucleus_coord (context, 'T', nucl_coord2, 3*nucl_num);
rc = qmckl_get_nucleus_coord (context, 'T', nucl_coord2, 3*chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
for (int64_t i=0 ; i<3*nucl_num ; ++i) {
for (int64_t i=0 ; i<3*chbrclf_nucl_num ; ++i) {
assert( nucl_coord[i] == nucl_coord2[i] );
}
double nucl_charge2[nucl_num];
double nucl_charge2[chbrclf_nucl_num];
rc = qmckl_get_nucleus_charge(context, nucl_charge2, nucl_num);
rc = qmckl_get_nucleus_charge(context, nucl_charge2, chbrclf_nucl_num);
assert(rc == QMCKL_NOT_PROVIDED);
rc = qmckl_set_nucleus_charge(context, nucl_charge, nucl_num);
rc = qmckl_set_nucleus_charge(context, nucl_charge, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
rc = qmckl_get_nucleus_charge(context, nucl_charge2, nucl_num);
rc = qmckl_get_nucleus_charge(context, nucl_charge2, chbrclf_nucl_num);
assert(rc == QMCKL_SUCCESS);
for (int64_t i=0 ; i<nucl_num ; ++i) {
for (int64_t i=0 ; i<chbrclf_nucl_num ; ++i) {
assert( nucl_charge[i] == nucl_charge2[i] );
}
assert(qmckl_nucleus_provided(context));
@ -784,7 +783,7 @@ qmckl_get_nucleus_nn_distance(qmckl_context context,
qmckl_exit_code rc = qmckl_provide_nn_distance(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->nucleus.num * ctx->nucleus.num;
@ -828,7 +827,7 @@ qmckl_exit_code qmckl_provide_nn_distance(qmckl_context context)
return (char) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->nucleus.provided) return QMCKL_NOT_PROVIDED;
@ -940,10 +939,10 @@ qmckl_exit_code qmckl_compute_nn_distance (
assert(qmckl_nucleus_provided(context));
double distance[nucl_num*nucl_num];
rc = qmckl_get_nucleus_nn_distance(context, distance, nucl_num*nucl_num);
double distance[chbrclf_nucl_num*chbrclf_nucl_num];
rc = qmckl_get_nucleus_nn_distance(context, distance, chbrclf_nucl_num*chbrclf_nucl_num);
assert(distance[0] == 0.);
assert(distance[1] == distance[nucl_num]);
assert(distance[1] == distance[chbrclf_nucl_num]);
assert(fabs(distance[1]-2.070304721365169) < 1.e-12);
#+end_src
@ -973,7 +972,7 @@ qmckl_get_nucleus_nn_distance_rescaled(qmckl_context context,
qmckl_exit_code rc = qmckl_provide_nn_distance_rescaled(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
const int64_t sze = ctx->nucleus.num * ctx->nucleus.num;
@ -1019,7 +1018,7 @@ qmckl_exit_code qmckl_provide_nn_distance_rescaled(qmckl_context context)
return (char) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
if (!ctx->nucleus.provided) return QMCKL_NOT_PROVIDED;
@ -1167,7 +1166,7 @@ qmckl_exit_code qmckl_get_nucleus_repulsion(qmckl_context context, double* const
qmckl_exit_code rc = qmckl_provide_nucleus_repulsion(context);
if (rc != QMCKL_SUCCESS) return rc;
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
*energy = ctx->nucleus.repulsion;
@ -1203,7 +1202,7 @@ qmckl_exit_code qmckl_provide_nucleus_repulsion(qmckl_context context)
return (char) 0;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
qmckl_exit_code rc;

8
org/qmckl_numprec.org
View File

@ -141,7 +141,7 @@ qmckl_exit_code qmckl_set_numprec_precision(const qmckl_context context, const i
"precision > 53");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
/* This should be always true because the context is valid */
assert (ctx != NULL);
@ -185,7 +185,7 @@ int qmckl_get_numprec_precision(const qmckl_context context) {
"");
}
const qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
const qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
return ctx->numprec.precision;
}
#+end_src
@ -232,7 +232,7 @@ qmckl_exit_code qmckl_set_numprec_range(const qmckl_context context, const int r
"range > 11");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
/* This should be always true because the context is valid */
assert (ctx != NULL);
@ -275,7 +275,7 @@ int qmckl_get_numprec_range(const qmckl_context context) {
"");
}
const qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
const qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
return ctx->numprec.range;
}
#+end_src

10
org/qmckl_point.org
View File

@ -81,7 +81,7 @@ int main() {
|----------+----------------+-------------------------------------------|
| ~num~ | ~int64_t~ | Total number of points |
| ~date~ | ~uint64_t~ | Last modification date of the coordinates |
| ~coord~ | ~qmckl_matrix~ | ~num~ \times 3 matrix3 |
| ~coord~ | ~qmckl_matrix~ | ~num~ \times 3 matrix |
We consider that the matrix is stored 'transposed' and 'normal'
corresponds to the 3 \times ~num~ matrix.
@ -108,7 +108,7 @@ qmckl_exit_code qmckl_init_point(qmckl_context context) {
return false;
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
memset(&(ctx->point), 0, sizeof(qmckl_point_struct));
@ -148,7 +148,7 @@ qmckl_get_point_num (const qmckl_context context, int64_t* const num) {
"num is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
assert (ctx->point.num >= (int64_t) 0);
@ -202,7 +202,7 @@ qmckl_get_point(const qmckl_context context,
"coord is a null pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
int64_t point_num = ctx->point.num;
@ -295,7 +295,7 @@ qmckl_set_point (qmckl_context context,
"coord is a NULL pointer");
}
qmckl_context_struct* const ctx = (qmckl_context_struct* const) context;
qmckl_context_struct* const ctx = (qmckl_context_struct*) context;
assert (ctx != NULL);
qmckl_exit_code rc;

2
org/qmckl_sherman_morrison_woodbury.org
View File

@ -965,7 +965,7 @@ qmckl_exit_code qmckl_sherman_morrison_smw32s(const qmckl_context context,
rc = qmckl_woodbury_3(context, LDS, Dim, Updates_3block, Updates_index_3block, breakdown, Slater_inv, determinant);
if (rc != 0) { // Send the entire block to slagel_splitting
uint64_t l = 0;
rc = qmckl_slagel_splitting(LDS, Dim, 3, Updates_3block, Updates_index_3block,
(void) qmckl_slagel_splitting(LDS, Dim, 3, Updates_3block, Updates_index_3block,
breakdown, Slater_inv, later_updates + (Dim * later), later_index + later, &l, determinant);
later = later + l;
}