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qmckl/org/qmckl_sherman_morrison_woodbury.org

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#+TITLE: Sherman-Morrison-Woodbury
#+SETUPFILE: ../tools/theme.setup
#+INCLUDE: ../tools/lib.org
Low- and high-level functions that use the Sherman-Morrison and Woodbury matrix inversion formulas to update the
inverse of a non-singualr matrix
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* Headers
#+begin_src elisp :noexport :results none
(org-babel-lob-ingest "../tools/lib.org")
#+end_src
#+begin_src c :comments link :tangle (eval c_test) :noweb yes
#include "qmckl.h"
#include "assert.h"
#ifdef HAVE_CONFIG_H
#include "config.h"
#endif
#include <math.h>
#ifndef THRESHOLD
#define THRESHOLD 1e-3
#endif
#include "qmckl.h"
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int main() {
qmckl_context context;
context = qmckl_context_create();
#+end_src
* Sherman-Morrison Helper Functions
[TODO: FMJC] Add doc
** ~qmckl_sherman_morrison_threshold~
:PROPERTIES:
:Name: qmckl_sherman_morrison_threshold
:CRetType: double
:FRetType: double precision
:END:
[TODO: FMJC] Add doc
#+NAME: qmckl_sherman_morrison_threshold_args
| double | thresh | out | Threshold |
*** Requirements
Add description of the input variables. (see for e.g. qmckl_distance.org)
*** C header
#+CALL: generate_c_header(table=qmckl_sherman_morrison_threshold_args,rettyp=get_value("CRetType"),fname=get_value("Name"))
#+RESULTS:
#+begin_src c :tangle (eval h_func) :comments org
// Sherman-Morrison-Woodbury break-down threshold
#ifndef THRESHOLD
#define THRESHOLD 1e-3
#endif
qmckl_exit_code qmckl_sherman_morrison_threshold (
double* const thresh );
#+end_src
*** Source Fortran
#+begin_src f90 :tangle (eval f)
integer function qmckl_sherman_morrison_threshold_f(thresh) result(info)
use qmckl
implicit none
real*8 , intent(inout) :: thresh
!logical, external :: qmckl_sherman_morrison_f
info = qmckl_sherman_morrison_threshold(thresh)
end function qmckl_sherman_morrison_threshold_f
#+end_src
*** Source C
#+begin_src c :tangle (eval c) :comments org
#include <stdbool.h>
#include <math.h>
#include "qmckl.h"
// Sherman-Morrison-Woodbury break-down threshold
static double qmckl_shreman_morrison_threshold(double* const threshold) {
*threshold = THRESHOLD;
#ifdef DEBUG
std::cerr << "Break-down threshold set to: " << threshold << std::endl;
#endif
}
#+end_src
*** Performance
** C interface :noexport:
#+CALL: generate_c_interface(table=qmckl_sherman_morrison_threshold_args,rettyp=get_value("FRetType"),fname=get_value("Name"))
#+RESULTS:
#+begin_src f90 :tangle (eval f) :comments org :exports none
integer(c_int32_t) function qmckl_sherman_morrison_threshold &
(thresh) &
bind(C) result(info)
use, intrinsic :: iso_c_binding
implicit none
real (c_double ) , intent(out) :: thresh
integer(c_int32_t), external :: qmckl_sherman_morrison_threshold_f
info = qmckl_sherman_morrison_threshold_f &
(thresh)
end function qmckl_sherman_morrison_threshold
#+end_src
#+CALL: generate_f_interface(table=qmckl_sherman_morrison_threshold_args,rettyp=get_value("FRetType"),fname=get_value("Name"))
#+RESULTS:
#+begin_src f90 :tangle (eval fh_func) :comments org :exports none
interface
integer(c_int32_t) function qmckl_sherman_morrison_threshold &
(thresh) &
bind(C)
use, intrinsic :: iso_c_binding
import
implicit none
real (c_double ) , intent(out) :: thresh
end function qmckl_sherman_morrison_threshold
end interface
#+end_src
*** Test :noexport:
[TODO: FMJC] Write tests for the Sherman-Morrison part.
* Naïve Sherman-Morrison
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** ~qmckl_sherman_morrison~
:PROPERTIES:
:Name: qmckl_sherman_morrison
:CRetType: qmckl_exit_code
:FRetType: qmckl_exit_code
:END:
The Sherman-Morrison formula
\begin{align}
S_k^{-1} &= (S_l + U_k)^-1 \\
&= S_l^{-1} - \frac{S_l^{-1}U_kS_l}{1+\underline{v}_k^tS_l^{-1}\underline{u}_k}
\end{align}
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#+NAME: qmckl_sherman_morrison_args
| qmckl_context | context | in | Global state |
| uint64_t | Dim | in | Leading dimension of Slater_inv |
| uint64_t | N_updates | in | Number of rank-1 updates to be applied to Slater_inv |
| double | Updates[N_updates*Dim] | in | Array containing the updates |
| uint64_t | Updates_index[N_updates] | in | Array containing the rank-1 updates |
| double | Slater_inv[Dim*Dim] | inout | Array containing the inverse of a Slater-matrix |
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*** Requirements
Add description of the input variables. (see for e.g. qmckl_distance.org)
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*** C header
#+CALL: generate_c_header(table=qmckl_sherman_morrison_args,rettyp=get_value("CRetType"),fname=get_value("Name"))
#+RESULTS:
#+begin_src c :tangle (eval h_func) :comments org
qmckl_exit_code qmckl_sherman_morrison_c (
const qmckl_context context,
const uint64_t Dim,
const uint64_t N_updates,
const double* Updates,
const uint64_t* Updates_index,
double* Slater_inv );
#+end_src
*** Source Fortran
#+begin_src f90 :tangle (eval f)
integer function qmckl_sherman_morrison_f(context, Slater_inv, Dim, N_updates, &
Updates, Updates_index) result(info)
use qmckl
implicit none
integer(qmckl_context) , intent(in) :: context
integer*8 , intent(in) :: Dim, N_updates
integer*8 , intent(in) :: Updates_index(N_updates)
real*8 , intent(in) :: Updates(N_updates*Dim)
real*8 , intent(inout) :: Slater_inv(Dim*Dim)
!logical, external :: qmckl_sherman_morrison_f
info = qmckl_sherman_morrison(context, Dim, N_updates, Updates, Updates_index, Slater_inv)
end function qmckl_sherman_morrison_f
#+end_src
*** Source C
#+begin_src c :tangle (eval c) :comments org
#include <stdbool.h>
#include "qmckl.h"
qmckl_exit_code qmckl_sherman_morrison_c(const qmckl_context context,
const uint64_t Dim,
const uint64_t N_updates,
const double* Updates,
const uint64_t* Updates_index,
double * Slater_inv) {
#ifdef DEBUG
std::cerr << "Called qmckl_sherman_morrison with " << N_updates << " updates" << std::endl;
#endif
double C[Dim];
double D[Dim];
double threshold = 0.0;
qmckl_sherman_morrison_threshold(&threshold);
unsigned int l = 0;
// For each update
while (l < N_updates) {
// C = A^{-1} x U_l
for (unsigned int i = 0; i < Dim; i++) {
C[i] = 0;
for (unsigned int j = 0; j < Dim; j++) {
C[i] += Slater_inv[i * Dim + j] * Updates[l * Dim + j];
}
}
// Denominator
double den = 1 + C[Updates_index[l] - 1];
if (fabs(den) < threshold) {
return false;
}
double iden = 1 / den;
// D = v^T x A^{-1}
for (unsigned int j = 0; j < Dim; j++) {
D[j] = Slater_inv[(Updates_index[l] - 1) * Dim + j];
}
// A^{-1} = A^{-1} - C x D / den
for (unsigned int i = 0; i < Dim; i++) {
for (unsigned int j = 0; j < Dim; j++) {
double update = C[i] * D[j] * iden;
Slater_inv[i * Dim + j] -= update;
}
}
l += 1;
}
return QMCKL_SUCCESS;
}
#+end_src
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*** Performance
** C interface :noexport:
#+CALL: generate_c_interface(table=qmckl_sherman_morrison_args,rettyp=get_value("FRetType"),fname=get_value("Name"))
#+RESULTS:
#+begin_src f90 :tangle (eval f) :comments org :exports none
integer(c_int32_t) function qmckl_sherman_morrison &
(context, Dim, N_updates, Updates, Updates_index, Slater_inv) &
bind(C) result(info)
use, intrinsic :: iso_c_binding
implicit none
integer (c_int64_t) , intent(in) , value :: context
integer (c_int64_t) , intent(in) , value :: Dim
integer (c_int64_t) , intent(in) , value :: N_updates
real (c_double ) , intent(in) :: Updates(N_updates*Dim)
integer (c_int64_t) , intent(in) :: Updates_index(N_updates)
real (c_double ) , intent(inout) :: Slater_inv(Dim*Dim)
integer(c_int32_t), external :: qmckl_sherman_morrison_c
info = qmckl_sherman_morrison_c &
(context, Dim, N_updates, Updates, Updates_index, Slater_inv)
end function qmckl_sherman_morrison
#+end_src
#+CALL: generate_f_interface(table=qmckl_sherman_morrison_args,rettyp=get_value("FRetType"),fname=get_value("Name"))
#+RESULTS:
#+begin_src f90 :tangle (eval fh_func) :comments org :exports none
interface
integer(c_int32_t) function qmckl_sherman_morrison &
(context, Dim, N_updates, Updates, Updates_index, Slater_inv) &
bind(C)
use, intrinsic :: iso_c_binding
import
implicit none
integer (c_int64_t) , intent(in) , value :: context
integer (c_int64_t) , intent(in) , value :: Dim
integer (c_int64_t) , intent(in) , value :: N_updates
real (c_double ) , intent(in) :: Updates(N_updates*Dim)
integer (c_int64_t) , intent(in) :: Updates_index(N_updates)
real (c_double ) , intent(inout) :: Slater_inv(Dim*Dim)
end function qmckl_sherman_morrison
end interface
#+end_src
*** Test :noexport:
[TODO: FMJC] Write tests for the Sherman-Morrison part.
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* End of files
#+begin_src c :comments link :tangle (eval c_test)
assert (qmckl_context_destroy(context) == QMCKL_SUCCESS);
return 0;
}
#+end_src
# -*- mode: org -*-
# vim: syntax=c