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https://github.com/TREX-CoE/Sherman-Morrison.git
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Changed code to treat the dataset as replacement updates, instead of additive updates. Before the updates are used to compute the inverse they are transformed accordingly.
However, this breaks the 4x4 example in update cycle 8169.
This commit is contained in:
parent
4c7a567750
commit
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14
Makefile
14
Makefile
@ -1,18 +1,18 @@
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## Compilers
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## Compilers
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ARCH =
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ARCH =
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H5CXX = h5c++ -std=gnu++11
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CXX = icpc
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CXX = g++
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FC = ifort
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FC = gfortran
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H5CXX = h5c++
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## Compiler flags
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## Compiler flags
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H5CXXFLAGS = -O0 -g
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CXXFLAGS = -O0 -debug full -traceback
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CXXFLAGS = -O0 -g
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FFLAGS = $(CXXFLAGS)
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FFLAGS = -O0 -g
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H5CXXFLAGS = $(CXXFLAGS) -fPIC
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FLIBS = -lstdc++
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INCLUDE = -I $(INC_DIR)/
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INCLUDE = -I $(INC_DIR)/
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DEPS_CXX = $(OBJ_DIR)/SM_MaponiA3.o $(OBJ_DIR)/SM_Standard.o
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DEPS_CXX = $(OBJ_DIR)/SM_MaponiA3.o $(OBJ_DIR)/SM_Standard.o
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DEPS_F = $(DEPS_CXX) $(OBJ_DIR)/SM_MaponiA3_mod.o $(OBJ_DIR)/Helpers_mod.o
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DEPS_F = $(DEPS_CXX) $(OBJ_DIR)/SM_MaponiA3_mod.o $(OBJ_DIR)/Helpers_mod.o
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FLIBS = -lstdc++
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SRC_DIR := src
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SRC_DIR := src
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TST_DIR := tests
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TST_DIR := tests
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@ -17,4 +17,22 @@ printf("--------------------------------------\n")
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printf("Determinant of S x S_inv : %f\n", det(S*S_inv))
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printf("Determinant of S x S_inv : %f\n", det(S*S_inv))
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printf("Trace of S x S_inv : %f\n", trace(S*S_inv))
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printf("Trace of S x S_inv : %f\n", trace(S*S_inv))
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printf("Norm of S x S_inv : %f\n", norm(S*S_inv))
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printf("Norm of S x S_inv : %f\n", norm(S*S_inv))
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printf("======================================\n")
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cutoff = 1e-6;
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printf("\n")
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printf("Cutoff set to %e: S x S_inv = \n", cutoff)
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printf(" -----------------------------------------\n")
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dim = columns(S);
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res=S*S_inv;
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for i = 1:dim
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for j = 1:dim
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if (res(i,j) < cutoff)
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res(i,j) = 0;
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elseif (S(i,j)-1 < cutoff)
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res(i,j) = 1;
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endif
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endfor
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endfor
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format free;
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disp(res);
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printf(" =========================================\n")
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3
smvarsrc
3
smvarsrc
@ -1,3 +1,6 @@
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#!/usr/bin/env bash
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#!/usr/bin/env bash
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export HDF5_CXX=icpc
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export HDF5_CXXLINKER=icpc
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export PATH=$PWD/bin:$PATH
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export PATH=$PWD/bin:$PATH
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@ -1309,9 +1309,6 @@ END_PROVIDER
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write(501,10007)
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write(501,10007)
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write(502,10007)
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write(502,10007)
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cycle_id = cycle_id + 1
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cycle_id = cycle_id + 1
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!close(501) !! Close file
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!close(502) !! Close file
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!stop
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else
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else
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@ -6,7 +6,7 @@ program QMCChem_dataset_test
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integer :: i, j, col !! Iterators
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integer :: i, j, col !! Iterators
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integer :: cycle_id, dim, n_updates
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integer :: cycle_id, dim, n_updates
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integer(c_int), dimension(:), allocatable :: Updates_index
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integer(c_int), dimension(:), allocatable :: Updates_index
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real(c_double), dimension(:,:), allocatable :: Updates
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real(c_double), dimension(:,:), allocatable :: Updates, U
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real(c_double), dimension(:,:), allocatable :: S, S_inv, S_inv_t
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real(c_double), dimension(:,:), allocatable :: S, S_inv, S_inv_t
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call Read_dataset("datasets/update_cycle_8169.dat", &
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call Read_dataset("datasets/update_cycle_8169.dat", &
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@ -17,7 +17,7 @@ program QMCChem_dataset_test
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S_inv, &
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S_inv, &
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Updates_index, &
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Updates_index, &
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Updates)
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Updates)
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allocate(S_inv_t(dim,dim))
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allocate(S_inv_t(dim,dim), U(dim,n_updates))
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!! Write current S and S_inv to file for check in Octave
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!! Write current S and S_inv to file for check in Octave
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open(unit = 2000, file = "Slater_old.dat")
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open(unit = 2000, file = "Slater_old.dat")
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@ -43,11 +43,13 @@ program QMCChem_dataset_test
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end do
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end do
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close(2000)
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close(2000)
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!! Update S
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!! Update S & transform replacement updates 'Updates'
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!! into additive updates 'U' to compute the inverse
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do j=1,n_updates
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do j=1,n_updates
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do i=1,dim
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do i=1,dim
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col = Updates_index(j)
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col = Updates_index(j)
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S(i,col) = S(i,col) + Updates(i,j)
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U(i,j) = Updates(i,j) - S(i,col)
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S(i,col) = Updates(i,j)
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end do
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end do
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end do
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end do
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@ -55,11 +57,12 @@ program QMCChem_dataset_test
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!! S_inv needs to be transposed first before it
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!! S_inv needs to be transposed first before it
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!! goes to MaponiA3
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!! goes to MaponiA3
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call Transpose(S_inv, S_inv_t, dim)
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call Transpose(S_inv, S_inv_t, dim)
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call MaponiA3(S_inv_t, dim, n_updates, Updates, Updates_index)
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call MaponiA3(S_inv_t, dim, n_updates, U, Updates_index)
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!! S_inv_t needs to be transposed back before we
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!! S_inv_t needs to be transposed back before it
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!! can multiply it with S to test unity
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!! can be multiplied with S to test unity
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call Transpose(S_inv_t, S_inv, dim)
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call Transpose(S_inv_t, S_inv, dim)
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!! Write new S and S_inv to file for check in Octave
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!! Write new S and S_inv to file for check in Octave
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open(unit = 4000, file = "Slater.dat")
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open(unit = 4000, file = "Slater.dat")
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open(unit = 5000, file = "Slater_inv.dat")
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open(unit = 5000, file = "Slater_inv.dat")
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