From d89682cb7ee8beeb0e01d6129afd18d8cd9c78ee Mon Sep 17 00:00:00 2001 From: Anthony Scemama Date: Thu, 13 Jun 2024 17:50:27 +0200 Subject: [PATCH] Improved disk access in Cholesky --- src/ao_two_e_ints/cholesky.irp.f | 98 +++++++++++++++++++++++++++++--- 1 file changed, 89 insertions(+), 9 deletions(-) diff --git a/src/ao_two_e_ints/cholesky.irp.f b/src/ao_two_e_ints/cholesky.irp.f index 41cdb80d..05f7115d 100644 --- a/src/ao_two_e_ints/cholesky.irp.f +++ b/src/ao_two_e_ints/cholesky.irp.f @@ -41,7 +41,7 @@ END_PROVIDER integer*8, allocatable :: Lset(:), Dset(:), addr3(:) logical, allocatable :: computed(:) - integer :: i,j,k,m,p,q, dj, p2, q2 + integer :: i,j,k,m,p,q, dj, p2, q2, ii, jj integer*8 :: i8, j8, p8, qj8, rank_max, np8 integer :: N, np, nq @@ -65,6 +65,8 @@ END_PROVIDER type(c_ptr) :: c_pointer(2) integer :: fd(2) logical :: delta_on_disk + integer :: dgemm_block_size, nqq + double precision, allocatable :: dgemm_buffer1(:,:), dgemm_buffer2(:,:) PROVIDE nproc PROVIDE nucl_coord ao_two_e_integral_schwartz @@ -300,17 +302,58 @@ END_PROVIDER !$OMP BARRIER !$OMP END PARALLEL + PROVIDE nproc if (N>0) then - call dgemm('N','T', np, nq, N, -1.d0, & - Ltmp_p, np, Ltmp_q, nq, 0.d0, Delta, np) - else - !$OMP PARALLEL DO DEFAULT(SHARED) PRIVATE(q,j) SCHEDULE(static,1) - do q=1,nq - do j=1,np - Delta(j,q) = 0.d0 + + if (delta_on_disk) then + ! Blocking improves I/O performance + + dgemm_block_size = nproc*4 + + allocate (dgemm_buffer1(np,dgemm_block_size)) + allocate (dgemm_buffer2(dgemm_block_size,N)) + + do jj=1,nq,dgemm_block_size + + nqq = min(nq, jj+dgemm_block_size-1) - jj + 1 + + !$OMP PARALLEL DO DEFAULT(SHARED) PRIVATE(q,ii) + do ii=1,N + do q=jj,jj+nqq-1 + dgemm_buffer2(q-jj+1,ii) = Ltmp_q(q,ii) + enddo + enddo + !$OMP END PARALLEL DO + + call dgemm('N', 'T', np, nqq, N, 1.d0, & + Ltmp_p, np, dgemm_buffer2, dgemm_block_size, 0.d0, dgemm_buffer1, np) + + !$OMP PARALLEL DO DEFAULT(SHARED) PRIVATE(q) + do q=jj,jj+nqq-1 + Delta(:,q) = - dgemm_buffer1(:, q-jj+1) + enddo + !$OMP END PARALLEL DO + enddo + + deallocate(dgemm_buffer1, dgemm_buffer2) + + else + + call dgemm('N', 'T', np, nq, N, -1.d0, & + Ltmp_p(1,1), np, Ltmp_q(1,1), nq, 0.d0, Delta, np) + + endif + + + else + + !$OMP PARALLEL DO DEFAULT(SHARED) PRIVATE(q,j) + do q=1,nq + Delta(:,q) = 0.d0 enddo !$OMP END PARALLEL DO + endif ! f. @@ -329,9 +372,46 @@ END_PROVIDER rank = N+j if (iblock == block_size) then - call dgemm('N','T',np,nq,block_size,-1.d0, & + + if (delta_on_disk) then + ! Blocking improves I/O performance + + dgemm_block_size = nproc*4 + allocate (dgemm_buffer1(np,dgemm_block_size)) + allocate (dgemm_buffer2(dgemm_block_size,block_size)) + + do jj=1,nq,dgemm_block_size + nqq = min(nq, jj+dgemm_block_size-1) - jj + 1 + + !$OMP PARALLEL DO DEFAULT(SHARED) PRIVATE(q,ii) + do ii=1,block_size + do q=jj,jj+nqq-1 + dgemm_buffer2(q-jj+1,ii) = Ltmp_q(q,ii) + enddo + enddo + !$OMP END PARALLEL DO + + call dgemm('N', 'T', np, nqq, block_size, 1.d0, & + Ltmp_p(1,1), np, dgemm_buffer2, dgemm_block_size, 0.d0, dgemm_buffer1, np) + + !$OMP PARALLEL DO DEFAULT(SHARED) PRIVATE(q) + do q=jj,jj+nqq-1 + Delta(:,q) = Delta(:,q) - dgemm_buffer1(:, q-jj+1) + enddo + !$OMP END PARALLEL DO + + enddo + deallocate(dgemm_buffer1, dgemm_buffer2) + + else + + call dgemm('N','T',np,nq,block_size,-1.d0, & Ltmp_p, np, Ltmp_q, nq, 1.d0, Delta, np) + + endif + iblock = 0 + endif ! ii.