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Fixes in the loading process (#14)
* Fix broken link * Fix bug in indexDB * Fix sourceFile for each geometry * Use valueOf in ex.type * Fix VertExcitationKind for custom files * Fix excitationType bug when value is set to Single by default * Remove the unnecessary valuOf() * Copy type of excitation from the reference for custom files * Remove sets dependency for %T1 to allow cross set %T1 reference data Co-authored-by: Mickaël Véril <mveril@irsamc.ups-tlse.fr>
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@ -192,16 +192,28 @@ draft: false
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}
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async function reloadCustomFiles() {
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processingIndicator.isActive = true
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window.dats = window.defaultDats;
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window.customDats = []
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window.dats = window.defaultDats
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const kinds = new Map([["file_abs", VertExcitationKinds.Absorbtion], ["file_fluo", VertExcitationKinds.Fluorescence]])
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for (const el of $('#form_dat > fieldset > fieldset > div > input[type="file"')) {
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if (kinds.has(el.name)) {
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const kind=kinds.get(el.name)
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for (const f of el.files) {
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const dat = await VertDataFile.loadAsync(f, kinds.get(this.name))
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window.dats.push(dat)
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const dat = await VertDataFile.loadAsync(f, kind)
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window.customDats.push(dat)
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}
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}
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}
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for (const defdat of window.defaultDats) {
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if (defdat.method.isTBE) {
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for (const custdat of window.customDats) {
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if (custdat.molecule===defdat.molecule) {
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custdat.CopyExcitationsTypeFrom(defdat)
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}
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}
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}
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}
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window.dats=window.defaultDats.concat(window.customDats)
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processingIndicator.isActive = false
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reloadSizeSelector()
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reloadSelect("sets")
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@ -363,7 +375,7 @@ draft: false
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if (!(sdatdic.has(key))) {
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sdatdic.set(key, new Map())
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}
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const myT1s = T1ref.get(SetName).get(d.molecule)
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const myT1s = T1ref.get(d.molecule)
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for (const exc of d.excitations) {
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var allowT1 = false
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const T1Key = JSON.stringify((exc.initial, exc.final))
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@ -504,10 +516,9 @@ draft: false
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publiCache.set(DOI,await PubliData.loadAsync(DOI))
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}
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const setName = exSet.name
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window.T1ref.set(setName, new Map())
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for (const mol of mols) {
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window.T1ref.get(setName).set(mol, new Map())
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var TBESortdat = window.dats.filter((d)=>exSet.name === d.set.name && d.molecule === mol).sort((d1, d2) => {
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window.T1ref.set(mol, new Map())
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var TBESortdat = window.dats.filter((d)=> d.molecule === mol).sort((d1, d2) => {
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if (d1.method.isTBE && !d2.method.isTBE) {
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return -1
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} else if (!d1.method.isTBE && d2.method.isTBE) {
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@ -525,7 +536,7 @@ draft: false
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})
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if (TBESortdat.length > 0 && TBESortdat[0].method.isTBE) {
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for (const exc of TBESortdat[0].excitations) {
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window.T1ref.get(setName).get(mol).set(JSON.stringify((exc.initial, exc.final)), exc.T1)
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window.T1ref.get(mol).set(JSON.stringify((exc.initial, exc.final)), exc.T1)
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}
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}
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}
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@ -598,7 +609,7 @@ draft: false
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for (const dat of paperdata) {
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const setName = dat.set.name
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const key1 = dat.molecule;
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const myT1s = T1ref.get(setName).get(dat.molecule)
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const myT1s = T1ref.get(dat.molecule)
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if (!datadic.has(key1)) {
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datadic.set(key1, new Map())
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}
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@ -203,7 +203,7 @@ class excitationBase {
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this.type.Value = excitationTypes.Others.Value;
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}
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else if (!(this.type & (excitationTypes.Single.Value | excitationTypes.Double.Value))){
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this.type.Value = excitationTypes.Single
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this.type.Value += excitationTypes.Single.Value
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}
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this.T1 = T1
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}
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