10
0
mirror of https://github.com/LCPQ/quantum_package synced 2024-11-08 07:03:57 +01:00
quantum_package/scripts/get_basis.sh
Thomas Applencourt 2dbd82d2b6 Fix getbasis
2015-06-08 22:17:40 +02:00

57 lines
1.3 KiB
Bash
Executable File

#!/bin/bash
#
# get_basis.sh <temp_file> <basis_name> <atom_list>...
#
# Uses the EMSL_api.py to get the basis set:
# https://github.com/TApplencourt/EMSL_Basis_Set_Exchange_Local
#
# Prints in stdout the name of a temporary file containing the basis set.
#
if [[ -z ${QP_ROOT} ]]
then
print "The QP_ROOT environment variable is not set."
print "Please reload the quantum_package.rc file."
exit -1
fi
export EMSL_API_ROOT="${QP_ROOT}"/install/emsl
tmpfile="$1"
shift
# Case insensitive basis in input
#basis=$( ${EMSL_API_ROOT}/EMSL_api.py list_basis | cut -d "'" -f 2 | grep -i "^${1}\$")
basis="$1"
shift
atoms=""
for atom in $@
do
atoms+="--atom ${atom} "
done
if [[ $? -ne 0 ]]
then
echo "==================================================" 1>& 2
echo "Unable to create temporary file $tmpfile" 1>& 2
echo "==================================================" 1>& 2
echo "ERROR"
exit 1
fi
pseudo="$1"
shift
if [[ -z $pseudo ]]
then
${EMSL_API_ROOT}/EMSL_api.py get_basis_data --treat_l --save --path="${tmpfile}" --basis="${basis}"
else
${EMSL_API_ROOT}/EMSL_api.py get_basis_data --save --path="${tmpfile}" --basis="${basis}" --db_path="${EMSL_API_ROOT}/db/Pseudo.db"
# echo ${EMSL_API_ROOT}/EMSL_api.py get_basis_data --save --path="${tmpfile}" --basis="${basis}" --db_path="${EMSL_API_ROOT}/db/Pseudo.db" 1>&2
# echo $PWD/BASIS
fi