mirror of
https://github.com/LCPQ/quantum_package
synced 2024-12-22 04:14:07 +01:00
586 lines
17 KiB
Python
Executable File
586 lines
17 KiB
Python
Executable File
#!/usr/bin/env python2
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# -*- coding: utf-8 -*-
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"""configure
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Usage: configure <config_file>
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Options:
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config_file A config file with all the information for compiling.
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Example config_files are given in config/
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Examples:
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./configure config/gfortran.cfg
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./configure config/ifort.cfg
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"""
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OK="✓"
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FAIL="✗"
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import subprocess
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import os
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import sys
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from os.path import join
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if len(sys.argv) != 2:
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print __doc__
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sys.exit()
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# __ _
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# /__ | _ |_ _. | o ._ _|_ _
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# \_| |_ (_) |_) (_| | | | | | (_)
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#
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try:
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QP_ROOT = os.environ["QP_ROOT"]
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except KeyError:
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QP_ROOT = os.getcwd()
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os.environ["QP_ROOT"] = QP_ROOT
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QP_ROOT_BIN = join(QP_ROOT, "bin")
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QP_ROOT_LIB = join(QP_ROOT, "lib")
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QP_ROOT_LIB64 = join(QP_ROOT, "lib64")
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QP_ROOT_INSTALL = join(QP_ROOT, "install")
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os.environ["PATH"] = os.environ["PATH"] + ":" + QP_ROOT_BIN
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d_dependency = {
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"ocaml": ["m4", "curl", "zlib", "patch", "gcc", "zeromq", "gmp"],
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"m4": ["make"],
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"curl": ["make"],
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"zlib": ["gcc", "make"],
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"patch": ["make"],
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"ezfio": ["irpf90"],
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"irpf90": ["python"],
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"docopt": ["python"],
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"resultsFile": ["python"],
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"emsl": ["python"],
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"gcc": [],
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"g++": [],
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"zeromq" : [ "g++", "make" ],
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"f77zmq" : [ "zeromq", "python", "make" ],
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"python": [],
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"ninja": ["g++", "python"],
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"make": [],
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"p_graphviz": ["python"],
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"bats": [],
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"gmp" : ["make", "g++"]
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}
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from collections import namedtuple
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Info = namedtuple("Info", ["url", "description", "default_path"])
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path_github = {"head": "http://github.com", "tail": "archive/master.tar.gz"}
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def path_gitlab(user,project,branch):
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"""For example,
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https://gitlab.com/scemama/resultsFile/-/archive/master/resultsFile-master.tar.gz
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"""
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return "http://gitlab.com/%(user)s/%(project)s/-/archive/%(branch)s/%(project)s-%(branch)s.tar.gz"%locals()
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ocaml = Info(
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url='http://raw.github.com/ocaml/opam/master/shell/opam_installer.sh',
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description=' OCaml, Opam and the Core library (it will take some time roughly 20min)',
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default_path=join(QP_ROOT_BIN, "opam"))
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m4 = Info(
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url="http://ftp.gnu.org/gnu/m4/m4-latest.tar.gz",
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description=" m4",
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default_path=join(QP_ROOT_BIN, "m4"))
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curl = Info(
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url="http://qmcchem.ups-tlse.fr/files/scemama/curl-7.30.0.ermine.tar.bz2",
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description=" curl",
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default_path=join(QP_ROOT_BIN, "curl"))
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zlib = Info(
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url='http://www.zlib.net/zlib-1.2.11.tar.gz',
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description=' zlib',
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default_path=join(QP_ROOT_LIB, "libz.a"))
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patch = Info(
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url='ftp://ftp.gnu.org/gnu/patch/patch-2.7.5.tar.gz',
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description=' patch',
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default_path=join(QP_ROOT_BIN, "patch"))
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irpf90 = Info(
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url='{head}/LCPQ/irpf90/{tail}'.format(**path_github),
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description=' IRPF90',
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default_path=join(QP_ROOT_BIN, "irpf90"))
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docopt = Info(
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url='{head}/docopt/docopt/{tail}'.format(**path_github),
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description=' docopt',
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default_path=join(QP_ROOT_INSTALL, "docopt"))
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resultsFile = Info(
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url=path_gitlab("scemama","resultsFile","master"),
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description=' resultsFile',
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default_path=join(QP_ROOT_INSTALL, "resultsFile"))
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ninja = Info(
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url='{head}/martine/ninja/{tail}'.format(**path_github),
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description=' ninja',
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default_path=join(QP_ROOT_BIN, "ninja"))
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emsl = Info(
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url='{head}/LCPQ/EMSL_Basis_Set_Exchange_Local/{tail}'.format(**path_github),
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description=' EMSL basis set library',
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default_path=join(QP_ROOT_INSTALL, "emsl"))
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ezfio = Info(
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url='https://gitlab.com/scemama/EZFIO/-/archive/v1.3.5/EZFIO-v1.3.5.tar.gz',
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description=' EZFIO',
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default_path=join(QP_ROOT_INSTALL, "EZFIO"))
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zeromq = Info(
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url='https://github.com/zeromq/zeromq4-1/releases/download/v4.1.5/zeromq-4.1.5.tar.gz',
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description=' ZeroMQ',
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default_path=join(QP_ROOT_LIB, "libzmq.a"))
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gmp= Info(
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url='ftp://ftp.gnu.org/gnu/gmp/gmp-6.1.2.tar.bz2',
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description=' The GNU Multiple Precision Arithmetic Library',
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default_path=join(QP_ROOT_LIB, "libgmp.a"))
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f77zmq = Info(
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url='{head}/zeromq/f77_zmq/{tail}'.format(**path_github),
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description=' F77-ZeroMQ',
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default_path=join(QP_ROOT_LIB, "libf77zmq.a") )
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p_graphviz = Info(
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url='https://github.com/xflr6/graphviz/archive/master.tar.gz',
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description=' Python library for graphviz',
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default_path=join(QP_ROOT_INSTALL, "p_graphviz"))
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bats = Info(
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url='https://github.com/sstephenson/bats/archive/master.tar.gz',
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description=' Bash Automated Testing System',
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default_path=join(QP_ROOT_INSTALL, "bats"))
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d_info = dict()
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for m in ["ocaml", "m4", "curl", "zlib", "patch", "irpf90", "docopt",
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"resultsFile", "ninja", "emsl", "ezfio", "p_graphviz",
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"zeromq", "f77zmq", "bats", "gmp"]:
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exec ("d_info['{0}']={0}".format(m))
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def find_path(bin_, l_installed, var_for_qp_root=False):
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"""Use the global variable
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* l_installed
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* d_info
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"""
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try:
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locate = l_installed[bin_]
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except KeyError:
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locate = d_info[bin_].default_path
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if var_for_qp_root:
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locate = locate.replace(QP_ROOT, "${QP_ROOT}")
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return locate
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# _
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# |_ ._ _ _|_ o _ ._
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# | |_| | | (_ |_ | (_) | |
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#
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def check_output(*popenargs, **kwargs):
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"""Run command with arguments and return its output as a string.
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Backported from Python 2.7 as it's implemented as pure python on stdlib.
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>>> check_output(['/usr/bin/python', '--version'])
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Python 2.6.2
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"""
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process = subprocess.Popen(stdout=subprocess.PIPE,
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stderr=subprocess.PIPE, *popenargs, **kwargs)
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output, unused_err = process.communicate()
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retcode = process.poll()
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if retcode:
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cmd = kwargs.get("args")
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if cmd is None:
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cmd = popenargs[0]
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error = subprocess.CalledProcessError(retcode, cmd)
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error.output = output
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# print output
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# print unused_err
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raise error
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return output
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def checking(d_dependency):
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"""
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For each key in d_dependency check if it is avalabie
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"""
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def check_python():
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req_version = (2, 6)
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cur_version = sys.version_info
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# Check python
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if cur_version >= req_version:
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return 1
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else:
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print "To old version (need >2.5). Abort"
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sys.exit(1)
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def check_availability(binary):
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"""
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If avalable return the path where the binary
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can be found, else return 0
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"""
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if binary == "python":
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check_python()
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try:
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a = check_output(["which", binary])
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if binary == "irpf90":
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version = check_output("irpf90 -v".split()).strip()
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from distutils.version import LooseVersion
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if LooseVersion(version) < LooseVersion("1.6.7"):
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return 0
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else:
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return a
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return a
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except (OSError,subprocess.CalledProcessError):
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default_path = d_info[binary].default_path
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if os.path.exists(default_path):
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return default_path
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else:
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return 0
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def get_list_descendant(d_dependency, l_installed, l_needed):
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"""
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Descendant : a node reachable by repeated proceeding from parent to child.
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"""
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d_need_genealogy = dict()
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for need in l_needed:
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d_need_genealogy[need] = None
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for childen in d_dependency[need]:
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if childen not in l_installed:
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d_need_genealogy[childen] = None
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return d_need_genealogy.keys()
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return d_need_genealogy.keys()
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print """
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_
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|_) _ o _
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| \ (/_ \/ | (/_ \/\/
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"""
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print "Checking what you need to install and what is avalaible"
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print ""
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l_installed = dict()
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l_needed = []
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# Check all the others
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length = max(map(len, d_dependency))
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for i in d_dependency.keys():
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print "Checking {0:>{1}}...".format(i, length),
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r = check_availability(i)
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if r:
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print OK+" ( {0} )".format(r.strip())
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l_installed[i] = r.strip()
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else:
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print FAIL
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l_needed.append(i)
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print ""
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# Expand the needed stuff for all the genealogy
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l_install_descendant = get_list_descendant(d_dependency, l_installed,
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l_needed)
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return l_installed, l_install_descendant
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def installation(l_install_descendant):
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"""
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Installing all the list
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0 install ninja
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1 create ninja
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2 run ninja
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"""
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def create_rule_ninja():
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l_rules = [
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"rule download",
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" command = wget --no-check-certificate ${url} -O ${out} -o /dev/null",
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" description = Downloading ${descr}", ""
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]
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l_rules += [
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"rule install",
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" command = ./scripts/install_${target}.sh > _build/${target}.log 2>&1",
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" description = Installing ${descr}", ""
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]
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l_rules += [
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"rule install_verbose",
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' command = bash -o pipefail -c "./scripts/install_${target}.sh | tee _build/${target}.log 2>&1" ',
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" description = Installing ${descr}", " pool = console", ""
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]
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return l_rules
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def splitext(path):
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for ext in ['.tar.gz', '.tar.bz2']:
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if path.endswith(ext):
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return path[:-len(ext)], path[-len(ext):]
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return os.path.splitext(path)
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print """
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___
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| ._ _ _|_ _. | | _. _|_ o _ ._
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_|_ | | _> |_ (_| | | (_| |_ | (_) | |
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"""
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d_print = {
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"install_ninja": "Install ninja...",
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"build": "Creating build.ninja...",
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"install": "Installing the dependencies using Ninja..."
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}
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length = max(map(len, d_print.values()))
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def str_info(key):
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return "{0:<{1}}".format(d_print[key], length)
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if "ninja" in l_install_descendant:
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print str_info("install_ninja"),
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url = d_info["ninja"].url
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extension = splitext(url)[1]
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path_archive = "Downloads/{0}{1}".format("ninja", extension)
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l_cmd = ["set -x ;", "cd install &&",
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"wget {0} -O {1} &&".format(url, path_archive),
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"./scripts/install_ninja.sh &&", "cd -"]
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try:
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check_output(" ".join(l_cmd), shell=True)
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except:
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raise
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else:
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print OK
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l_install_descendant.remove("ninja")
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print str_info("build"),
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l_string = create_rule_ninja()
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l_build = []
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for need in l_install_descendant:
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url = d_info[need].url
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extension = splitext(url)[1]
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archive_path = "Downloads/{0}{1}".format(need, extension)
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descr = d_info[need].description
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default_path = d_info[need].default_path
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# Build to download
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l_build += ["build {0}: download".format(archive_path),
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" url = {0}".format(url), " descr = {0}".format(descr),
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""]
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# Build to install
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l_dependency = [d_info[i].default_path for i in d_dependency[need]
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if i in l_install_descendant]
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str_dependency = " ".join(l_dependency)
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rule = "install" if need != "ocaml" else "install_verbose"
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l_build += ["build {0}: {1} {2} {3}".format(default_path, rule,
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archive_path,
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str_dependency),
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" target = {0}".format(need),
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" descr = {0}".format(descr), ""]
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l_string += l_build
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path = join(QP_ROOT_INSTALL, "build.ninja")
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with open(path, "w+") as f:
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f.write("\n".join(l_string))
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print OK+" ({0})".format(path)
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print str_info("install"),
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print "Running"
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try:
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path_ninja = find_path("ninja", l_installed)
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subprocess.check_call("cd install ;{0}".format(path_ninja), shell=True)
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except:
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prefix = os.path.join('install', '_build')
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for filename in os.listdir(prefix):
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if filename.endswith(".log"):
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with open( os.path.join(prefix,filename) ,'r') as f:
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print "\n\n"
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print "=-=-=-=-=-=- %s =-=-=-=-=-=-" %(filename)
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print f.read()
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print "=-=-=-=-=-=-=-=-=-=-=-=-=-=-\n\n"
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print "Error in installation of dependencies"
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sys.exit(1)
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else:
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print r"""
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_________
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< Success >
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---------
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\ ^__^
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\ (oo)\_______
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(__)\ )\/\
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||----w |
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|| ||
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"""
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def create_ninja_and_rc(l_installed):
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print """
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_
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|_ o ._ _. | o _ _
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| | | | (_| | | /_ (/_
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"""
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d_print = {"qp_root": "Creating quantum_package.rc...",
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"build": "Creating build.ninja..."}
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length = max(map(len, d_print.values()))
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def str_info(key):
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return "{0:<{1}}".format(d_print[key], length)
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print str_info("qp_root"),
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python_path = [join(QP_ROOT, "scripts"), join(QP_ROOT, "install")]
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l_python = [join("${QP_ROOT}", "scripts")]
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for dir_ in python_path:
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for folder in os.listdir(dir_):
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path = join(dir_, folder)
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if os.path.isdir(path):
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path = path.replace(QP_ROOT,"${QP_ROOT}")
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l_python.append(path)
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path_ezfio = find_path('ezfio', l_installed, var_for_qp_root=True)
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path_irpf90 = find_path("irpf90", l_installed, var_for_qp_root=True)
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path_ninja = find_path("ninja", l_installed, var_for_qp_root=True)
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l_rc = [
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'export QP_ROOT={0}'.format(QP_ROOT),
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'export QP_EZFIO={0}'.format(path_ezfio.replace(QP_ROOT,"${QP_ROOT}")),
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'export QP_PYTHON={0}'.format(":".join(l_python)), "",
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'export IRPF90={0}'.format(path_irpf90.replace(QP_ROOT,"${QP_ROOT}")),
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'export NINJA={0}'.format(path_ninja.replace(QP_ROOT,"${QP_ROOT}")),
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'function qp_prepend_export () {',
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' #Prepend path $2:${!1}. Add the semicolon only if ${!1} is defined',
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' eval "value_1=\"\${$1}\""',
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' echo ${value_1:+${value_1}:}${2}',
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'}',
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'export PYTHONPATH=$(qp_prepend_export "PYTHONPATH" "${QP_EZFIO}/Python":"${QP_PYTHON}")',
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'export PATH=$(qp_prepend_export "PATH" "${QP_PYTHON}":"${QP_ROOT}"/bin:"${QP_ROOT}"/ocaml)',
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'export LD_LIBRARY_PATH=$(qp_prepend_export "LD_LIBRARY_PATH" "${QP_ROOT}"/lib:"${QP_ROOT}"/lib64)',
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'export LIBRARY_PATH=$(qp_prepend_export "LIBRARY_PATH" "${QP_ROOT}"/lib:"${QP_ROOT}"/lib64)',
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'export C_INCLUDE_PATH=$(qp_prepend_export "C_INCLUDE_PATH" "${QP_ROOT}"/include)',
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'',
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'if [[ $SHELL == "bash" ]] ; then',
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' source ${QP_ROOT}/install/EZFIO/Bash/ezfio.sh',
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'fi',
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'',
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'# Choose the correct network interface',
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'# export QP_NIC=ib0',
|
|
'# export QP_NIC=eth0',
|
|
''
|
|
]
|
|
|
|
qp_opam_root = os.getenv('OPAMROOT')
|
|
if not qp_opam_root:
|
|
qp_opam_root = '${HOME}/.opam'
|
|
l_rc.append('export QP_OPAM={0}'.format(qp_opam_root))
|
|
l_rc.append('source ${QP_OPAM}/opam-init/init.sh > /dev/null 2> /dev/null || true')
|
|
l_rc.append('')
|
|
|
|
path = join(QP_ROOT, "quantum_package.rc")
|
|
with open(path, "w+") as f:
|
|
f.write("\n".join(l_rc))
|
|
|
|
print OK+" ({0})".format(path)
|
|
|
|
command = ['bash', '-c', 'source {0} && env'.format(path)]
|
|
proc = subprocess.Popen(command, stdout=subprocess.PIPE)
|
|
for line in proc.stdout:
|
|
(key, _, value) = line.partition("=")
|
|
os.environ[key] = value.strip()
|
|
|
|
print str_info("build"),
|
|
|
|
qp_create_ninja = os.path.join(QP_ROOT, "scripts", "compilation",
|
|
"qp_create_ninja.py")
|
|
|
|
l = [qp_create_ninja, "create", "--development"] + sys.argv[1:]
|
|
|
|
try:
|
|
with open('/dev/null', 'w') as dnull:
|
|
subprocess.check_call(" ".join(l), shell=True, stderr=dnull)
|
|
except:
|
|
print "[ FAIL ]"
|
|
print "Check the validity of the config file provided ({0})".format(sys.argv[1])
|
|
print "Exit..."
|
|
raise
|
|
sys.exit(1)
|
|
|
|
else:
|
|
print OK
|
|
|
|
|
|
def recommendation():
|
|
path = join(QP_ROOT, "quantum_package.rc")
|
|
print "Now :"
|
|
print " source {0}".format(path)
|
|
print ""
|
|
print "Then, install the modules you want to install using :"
|
|
print " qp_module.py"
|
|
print ""
|
|
print "Finally :"
|
|
print " ninja"
|
|
print ""
|
|
print "You can install more plugin with the qp_module.py install command"
|
|
print "PS : For more info on compiling the code, read the README.md"
|
|
|
|
|
|
if __name__ == '__main__':
|
|
|
|
l_installed, l_install_descendant = checking(d_dependency)
|
|
|
|
if l_install_descendant:
|
|
print "You will need to install:"
|
|
for i in l_install_descendant:
|
|
print "* {0}".format(i)
|
|
|
|
installation(l_install_descendant)
|
|
else:
|
|
print "Perfect, nothing to install"
|
|
create_ninja_and_rc(l_installed)
|
|
|
|
recommendation()
|
|
|