mirror of
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7ebc2ac896
* Fixes #211 * Removed debug print * Revert input coordinates * Fix MPI |
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atomic_radii.irp.f | ||
EZFIO.cfg | ||
inertia.irp.f | ||
NEEDED_CHILDREN_MODULES | ||
nuclei.irp.f | ||
README.rst | ||
tree_dependency.png |
============= Nuclei Module ============= This module contains data relative to the nuclei (coordinates, charge, nuclear repulsion energy, etc). The coordinates are expressed in atomic units. Needed Modules ============== .. Do not edit this section It was auto-generated .. by the `update_README.py` script. .. image:: tree_dependency.png * `Ezfio_files <http://github.com/LCPQ/quantum_package/tree/master/src/Ezfio_files>`_ * `Utils <http://github.com/LCPQ/quantum_package/tree/master/src/Utils>`_ Needed Modules ============== .. Do not edit this section It was auto-generated .. by the `update_README.py` script. .. image:: tree_dependency.png * `Ezfio_files <http://github.com/LCPQ/quantum_package/tree/master/src/Ezfio_files>`_ * `Utils <http://github.com/LCPQ/quantum_package/tree/master/src/Utils>`_ Documentation ============= .. Do not edit this section It was auto-generated .. by the `update_README.py` script. `disk_access_nuclear_repulsion <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/ezfio_interface.irp.f#L6>`_ Read/Write Nuclear Repulsion from/to disk [ Write | Read | None ] `element_name <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L191>`_ Array of the name of element, sorted by nuclear charge (integer) `nucl_charge <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/ezfio_interface.irp.f#L44>`_ Nuclear charges `nucl_coord <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L12>`_ Nuclear coordinates in the format (:, {x,y,z}) `nucl_coord_transp <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L67>`_ Transposed array of nucl_coord `nucl_dist <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L86>`_ nucl_dist : Nucleus-nucleus distances nucl_dist_2 : Nucleus-nucleus distances squared nucl_dist_vec : Nucleus-nucleus distances vectors `nucl_dist_2 <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L82>`_ nucl_dist : Nucleus-nucleus distances nucl_dist_2 : Nucleus-nucleus distances squared nucl_dist_vec : Nucleus-nucleus distances vectors `nucl_dist_vec_x <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L83>`_ nucl_dist : Nucleus-nucleus distances nucl_dist_2 : Nucleus-nucleus distances squared nucl_dist_vec : Nucleus-nucleus distances vectors `nucl_dist_vec_y <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L84>`_ nucl_dist : Nucleus-nucleus distances nucl_dist_2 : Nucleus-nucleus distances squared nucl_dist_vec : Nucleus-nucleus distances vectors `nucl_dist_vec_z <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L85>`_ nucl_dist : Nucleus-nucleus distances nucl_dist_2 : Nucleus-nucleus distances squared nucl_dist_vec : Nucleus-nucleus distances vectors `nucl_label <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/ezfio_interface.irp.f#L64>`_ Nuclear labels `nucl_num <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/ezfio_interface.irp.f#L25>`_ Number of nuclei `nucl_num_aligned <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L1>`_ Number of nuclei algined `nuclear_repulsion <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L144>`_ Nuclear repulsion energy `positive_charge_barycentre <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/nuclei.irp.f#L128>`_ Centroid of the positive charges `slater_bragg_radii <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/atomic_radii.irp.f#L1>`_ atomic radii in Angstrom defined in table I of JCP 41, 3199 (1964) Slater execpt for the Hydrogen atom where we took the value of Becke (1988, JCP) `slater_bragg_radii_per_atom <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/atomic_radii.irp.f#L65>`_ Undocumented `slater_bragg_radii_per_atom_ua <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/atomic_radii.irp.f#L73>`_ Undocumented `slater_bragg_radii_ua <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/atomic_radii.irp.f#L57>`_ Undocumented `slater_bragg_type_inter_distance <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/atomic_radii.irp.f#L81>`_ Undocumented `slater_bragg_type_inter_distance_ua <http://github.com/LCPQ/quantum_package/tree/master/src/Nuclei/atomic_radii.irp.f#L95>`_ Undocumented