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https://github.com/LCPQ/quantum_package
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Remove check_dependencies.sh, is no handle by module_handler.py
This commit is contained in:
Thomas Applencourt
parent
fdc415b4a2
commit
df086e5edd
1
scripts/.gitignore
vendored
1
scripts/.gitignore
vendored
@ -1,2 +1,3 @@
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*.pyc
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*.pyo
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docopt.py
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@ -1,64 +0,0 @@
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#!/bin/bash
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#
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# usage:
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# check_dependencies.sh MOs AOs Electrons
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#
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# Checks that the list of dependencies given in
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# argument is consistent. If the dependencies
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# are OK the exit code is 0, otherwise it is 1.
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# If no argument is given, the dependencies are
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# read in the Makefile.
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# Thu Apr 3 01:44:23 CEST 2014
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if [[ -z ${QPACKAGE_ROOT} ]]
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then
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print "The QPACKAGE_ROOT environment variable is not set."
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print "Please reload the quantum_package.rc file."
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exit -1
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fi
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source ${QPACKAGE_ROOT}/scripts/qp_include.sh
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if [[ -z $1 ]]
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then
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exit 0
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fi
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if [[ $1 == "-" ]]
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then
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COMMAND_LINE=$(module_handler.py print_genealogy NEEDED_MODULES)
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else
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COMMAND_LINE=$(unique_list $@)
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fi
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for d in $COMMAND_LINE
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do
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if [[ ! -d ${QPACKAGE_ROOT}/src/$d ]]
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then
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echo Error: Directory $d does not exist
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exit 2
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fi
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done
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DEPS_LONG=""
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for i in $COMMAND_LINE
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do
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DEPS_LONG+=" $i "
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DEPS_LONG+=$(module_handler.py print_genealogy "${QPACKAGE_ROOT}/src/${i}/NEEDED_MODULES")
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done
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DEPS=$(unique_list $DEPS_LONG)
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if [[ ! "$COMMAND_LINE" == "$DEPS" ]]
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then
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DEPS=$(${QPACKAGE_ROOT}/scripts/check_dependencies.sh ${DEPS})
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fi
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echo "$DEPS"
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if [[ "$COMMAND_LINE" == "$DEPS" ]]
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then
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exit 0
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else
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exit 1
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fi
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@ -14,7 +14,5 @@ source ${QPACKAGE_ROOT}/scripts/qp_include.sh
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check_current_dir_is_module
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OUTPUT=$(${QPACKAGE_ROOT}/scripts/check_dependencies.sh $@)
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echo ${OUTPUT} > NEEDED_MODULES
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OUTPUT=$(module_handler.py check_dependencies $@)
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echo $@ > NEEDED_CHILDREN_MODULES
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@ -126,7 +126,7 @@ debug "Makefile created"
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# Create the NEEDED_MODULES file
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"${QPACKAGE_ROOT}/scripts/create/create_Needed_modules.sh" ${NEEDED_MODULES} || fail "Unable to create the NEEDED_MODULES file"
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if [[ ! -f NEEDED_MODULES ]]
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if [[ ! -f NEEDED_CHILDREN_MODULES ]]
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then
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fail "NEEDED_MODULES was not created"
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fi
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@ -8,13 +8,15 @@ of a NEEDED_CHILDREN_MODULES file
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Usage:
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module_handler.py print_genealogy [<NEEDED_CHILDREN_MODULES>]
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module_handler.py check_dependencies [<module_name>...]
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module_handler.py create_png [<NEEDED_CHILDREN_MODULES>]
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Options:
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print_genealogy Print the genealogy of the NEEDED_CHILDREN_MODULES
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aka (children, subchildren, etc)
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if NEEDED_CHILDREN_MODULES
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try to open it in the current path
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create_png Create a png of the file
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NEEDED_CHILDREN_MODULES The path of NEEDED_CHILDREN_MODULES
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by default try to open the file in the current path
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"""
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from docopt import docopt
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@ -73,8 +75,9 @@ def module_genealogy(path):
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try:
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with open(path, "r") as f:
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l_children = f.read().split()
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except IOError:
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return []
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except IOError as e:
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print >> sys.stderr, e
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sys.exit(1)
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else:
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needed_module = get_it_and_children(l_children)
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@ -169,6 +172,7 @@ def create_png(l_module):
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# Save
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path = '{0}.png'.format("_".join(l_module))
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print "png saved in {0}".format(path)
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graph.write_png(path)
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if __name__ == '__main__':
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@ -187,5 +191,12 @@ if __name__ == '__main__':
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l_all_needed_molule = module_genealogy(path)
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print " ".join(sorted(l_all_needed_molule))
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if arguments["create_png"]:
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elif arguments["check_dependencies"]:
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l_module = arguments['<module_name>']
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if l_module:
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l_all_needed_molule = get_it_and_children(l_module)
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else:
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l_all_needed_molule = module_genealogy(path)
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elif arguments["create_png"]:
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create_png_from_path(path)
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@ -14,7 +14,7 @@ check_current_dir_is_module
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# Check if the NEEDED_MODULES file is consistent
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INCLUDE_DIRS="${NEEDED_MODULES} include"
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NEEDED_MODULES_OK=$( ${QPACKAGE_ROOT}/scripts/check_dependencies.sh ${NEEDED_MODULES} )
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NEEDED_MODULES_OK=$(module_handler.py check_dependencies ${NEEDED_MODULES} )
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if [[ $? -ne 0 ]]
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then
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error "
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@ -1 +1 @@
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AOs Bielec_integrals Bitmask CID CID_SC2_selected CID_selected CIS CISD CISD_selected CISD_SC2_selected Determinants Electrons Ezfio_files Full_CI Generators_full Hartree_Fock MOGuess MonoInts MOs MP2 Nuclei Output Selectors_full Utils Molden FCIdump Generators_CAS CAS_SD DDCI_selected MRCC Pseudo_integrals
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AOs Bielec_integrals Bitmask CAS_SD CID CID_SC2_selected CID_selected CIS CISD CISD_SC2_selected CISD_selected DDCI_selected Determinants Electrons Ezfio_files FCIdump Full_CI Generators_CAS Generators_full Hartree_Fock MOGuess MOs MP2 MRCC Molden MonoInts Nuclei Output Perturbation Properties Pseudo_integrals Selectors_full SingleRefMethod Utils Toto
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