mirror of
https://github.com/LCPQ/quantum_package
synced 2024-11-03 20:54:00 +01:00
Add cache for the fortran
This commit is contained in:
Thomas Applencourt
parent
de5a05377a
commit
b91e0048df
63
scripts/compilation/cache_compile.py
Executable file
63
scripts/compilation/cache_compile.py
Executable file
@ -0,0 +1,63 @@
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#!/usr/bin/env python
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import os
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import sys
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import shelve
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import hashlib
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import re
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r = re.compile(ur'-c\s+(\S+\.[fF]90)\s+-o\s+(\S+\.o)')
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p = re.compile(ur'-I IRPF90_temp/\S*\s+')
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mod = re.compile(ur'module\s+(?P<mod>\S+).+end\s?module\s+(?P=mod)?', re.MULTILINE | re.IGNORECASE)
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TMPDIR="/tmp/qp_compiler/"
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def main():
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# Create temp directory
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if "qp_compiler" not in os.listdir("/tmp"):
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os.mkdir("/tmp/qp_compiler/")
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line = sys.argv[1:]
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command = " ".join(line)
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command_clean = p.sub('',command)
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try:
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match = r.search(command_clean)
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input = match.group(1)
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output = match.group(2)
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except:
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os.system(command)
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return
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m = hashlib.md5()
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# Fread : read input
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with open(input,'r') as file:
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fread = file.read()
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m.update( " ".join( [ command, fread ] ))
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# Md5 Key containing command + content of Fread
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key = TMPDIR+m.hexdigest()
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try:
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# Try to return the content of the .o file
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with open(key,'r') as file:
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result = file.read()
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except IOError:
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# Compile the file -> .o
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os.system(command)
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# Read the .o
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with open(output,'r') as file:
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result = file.read()
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# Copy the .o in database
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if not mod.search(fread.replace('\n',' ')):
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with open(key,'w') as file:
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file.write(result)
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else:
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print input+' -> module'
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else:
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# Write the .o file
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with open(output,'w') as file:
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file.write(result)
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if __name__ == '__main__':
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main()
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@ -51,7 +51,6 @@ def get_l_ezfio_irp(l_all_needed_molule, path_module):
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l_module_abs = [join(qpackage_root_src, m) for m in l_all_needed_molule]
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l_irp = []
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l_ezfio_module_abs = []
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for m in l_module_abs + [path_module.abs]:
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@ -59,10 +58,9 @@ def get_l_ezfio_irp(l_all_needed_molule, path_module):
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if file.endswith(".irp.f"):
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l_irp.append(join(m, file))
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if file == "EZFIO.cfg":
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l_ezfio_module_abs.append(m)
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l_irp.append(join(m, "ezfio_interface.irp.f"))
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return l_irp, l_ezfio_module_abs
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return l_irp
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def ninja_ezfio_cfg_rule():
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@ -75,10 +73,17 @@ def ninja_ezfio_cfg_rule():
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return l_string
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def ninja_ezfio_cfg_build(l_ezfio_module_abs):
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def ninja_ezfio_cfg_build():
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# Build
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l_string = []
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for m in l_ezfio_module_abs:
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from os import listdir
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from os.path import isfile, join
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qp_src = qpackage_root_src
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l = [join(qp_src, m) for m in listdir(qp_src) if isfile(join(qp_src, m, "EZFIO.cfg")) ]
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for m in l:
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ez_interface = join(m, "ezfio_interface.irp.f")
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ez_cfg = join(m, "EZFIO.cfg")
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@ -132,8 +137,13 @@ def ninja_symlink_build(l_source, l_destination):
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# |
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def ninja_irpf90_make_rule():
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# Rule
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l_string = ["rule build_irpf90.make"]
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l_string = ["pool irp_pool"]
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l_string += [" depth = 1"]
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l_string += [""]
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l_string += ["rule build_irpf90.make"]
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l_string += [" command = cd $module ; irpf90 $include_dir $irpf90_flag ; cd -"]
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l_string += [" pool = irp_pool"]
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l_string += [""]
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return l_string
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@ -189,7 +199,7 @@ def ninja_binary_rule():
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# Rule
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l_string = ["rule build_binary"]
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l_string += [" command = cd $module ; make $binary ; touch $binary; cd -"]
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l_string += [" command = cd $module ; make -j 1 $binary ; touch $binary; cd -"]
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l_string += [""]
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return l_string
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@ -215,9 +225,21 @@ def ninja_binary_build(l_bin, path_module):
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l_string += ["build build_all_binary_{0}: phony {1}".format(path_module.rel,
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str_l_abs_bin)]
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l_string += [""]
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return l_string
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def ninja_all_binary_build(l_module):
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l_build_name = ["build_all_binary_{0}".format(m) for m in l_module]
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str_l_build_name = " ".join(l_build_name)
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l_string = ["build build_all_binary: phony {0}".format(str_l_build_name)]
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l_string += [""]
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return l_string
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if __name__ == "__main__":
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with open(join(qpackage_root_src, "NEEDED_MODULES"), "r") as f:
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@ -231,7 +253,9 @@ if __name__ == "__main__":
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from collections import namedtuple
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for module_to_consider in ["Hartree_Fock", "AOs"]: #l_module_to_compile:
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# l_module_to_compile = ["AOs", "CAS_SD", "Hartree_Fock"]
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for module_to_consider in l_module_to_compile:
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Path = namedtuple('Path', ['abs', 'rel'])
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@ -245,16 +269,15 @@ if __name__ == "__main__":
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l_string += ninja_makefile_depend_build(l_all_needed_molule, path_module)
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# EZFIO.cfg rule and build
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l_irp, l_ezfio_module_abs = get_l_ezfio_irp(l_all_needed_molule, path_module)
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l_string += ninja_ezfio_cfg_build(l_ezfio_module_abs)
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l_irp = get_l_ezfio_irp(l_all_needed_molule, path_module)
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# Symlink rule and build
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l_source, l_destination = get_source_destination(l_all_needed_molule,
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path_module)
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l_string += ninja_symlink_build(l_source, l_destination)
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# irpf90.make
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l_string += ninja_irpf90_make_build(path_module,
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l_all_needed_molule + ["include"],
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l_irp,
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@ -263,4 +286,7 @@ if __name__ == "__main__":
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l_binary = get_program(path_module)
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l_string += ninja_binary_build(l_binary, path_module)
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l_string += ninja_ezfio_cfg_build()
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l_string += ninja_all_binary_build(l_module_to_compile)
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print "\n".join(l_string)
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@ -1,66 +1,12 @@
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.PHONY: default
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.SECONDARY: symlink ezfio_interface
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default: all .gitignore
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# Include the user's config
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include $(QPACKAGE_ROOT)/src/Makefile.config
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# Create the NEEDED_CHILDREN_MODULES variable, needed for IRPF90
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NEEDED_CHILDREN_MODULES=$(shell module_handler.py print_genealogy)
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# Define the Makefile common variables
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EZFIO_DIR=$(QPACKAGE_ROOT)/EZFIO
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EZFIO=$(EZFIO_DIR)/lib/libezfio_irp.a
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INCLUDE_DIRS=$(NEEDED_CHILDREN_MODULES) include
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clean_links:
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rm -f $(INCLUDE_DIRS) $$(basename $$PWD)
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LIB+=$(EZFIO) $(MKL)
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IRPF90+=$(patsubst %, -I %, $(INCLUDE_DIRS)) $(IRPF90_FLAGS)
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# Update Makefile.depend
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Makefile.depend: $(wildcard */Makefile)
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${QPACKAGE_ROOT}/scripts/module/module_handler.py save_makefile_depend
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# Create symlink
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symlink: $(wildcard $(QPACKAGE_ROOT)/src/*/NEEDED_CHILDREN_MODULES)
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${QPACKAGE_ROOT}/scripts/module/module_handler.py create_symlink
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# Define the EZFIO rules
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$(EZFIO): $(wildcard $(QPACKAGE_ROOT)/src/*/*.ezfio_config) $(wildcard $(QPACKAGE_ROOT)/src/*/EZFIO.cfg)
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$(QPACKAGE_ROOT)/scripts/ezfio_interface/prepare_ezfio.sh
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cd $(EZFIO_DIR);\
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export FC="$(FC)" ; export FCFLAGS="$(FCFLAGS)" ; export IRPF90="$(IRPF90)" ;\
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$(MAKE) ;\
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$(MAKE) Python
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# Update EZFIO interface (create the irp.f90 and the ocaml)
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ezfio_interface: symlink $(wildcard $(QPACKAGE_ROOT)/src/*/EZFIO.cfg)
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${QPACKAGE_ROOT}/scripts/ezfio_interface/ei_handler.py --irpf90 --ocaml --recursif
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irpf90.make: $(filter-out IRPF90_temp/%, $(wildcard */*.irp.f)) $(wildcard *.irp.f) $(wildcard .inc.f) Makefile.depend Makefile $(EZFIO) $(wildcard *.py) symlink ezfio_interface
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echo $(IRPF90)
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include Makefile.depend
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include irpf90.make
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# Need NEEDED_CHILDREN_MODULES and IRPMAN
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README.rst: NEEDED_CHILDREN_MODULES irpf90.make
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${QPACKAGE_ROOT}/scripts/module/update_README.py
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tree_dependancy.png: NEEDED_CHILDREN_MODULES
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${QPACKAGE_ROOT}/scripts/module/module_handler.py create_png
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#Need all the executable
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.gitignore: irpf90.make
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${QPACKAGE_ROOT}/scripts/module/create_gitignore.sh
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#
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#
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# # Frequent typos
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# clena: clean
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# veryclena: roger
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# vercylean: roger
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