From a346488c3a03ceb017d13702678042a068abd5f5 Mon Sep 17 00:00:00 2001
From: Manu <emmanuel_giner_jr@hotmail.fr>
Date: Sat, 17 May 2014 16:20:51 +0200
Subject: [PATCH] merged

---
 src/CISD/README.rst         |  6 +++---
 src/Makefile.config.example | 29 -----------------------------
 src/README.rst              |  8 ++++++++
 3 files changed, 11 insertions(+), 32 deletions(-)
 delete mode 100644 src/Makefile.config.example

diff --git a/src/CISD/README.rst b/src/CISD/README.rst
index ceb15b27..3af498d7 100644
--- a/src/CISD/README.rst
+++ b/src/CISD/README.rst
@@ -23,14 +23,14 @@ Documentation
 .. Do not edit this section. It was auto-generated from the
 .. NEEDED_MODULES file.
 
-`fill_h_apply_buffer_cisd <http://github.com/LCPQ/quantum_package/tree/master/src/CISD/H_apply.irp.f#L6>`_
+`fill_h_apply_buffer_cisd <http://github.com/LCPQ/quantum_package/tree/master/src/CISD/H_apply.irp.f#L/subroutine fill_H_apply_buffer_cisd(n_selected,det_buffer,Nint)/;">`_
   Fill the H_apply buffer with determiants for CISD
 
-`h_apply_cisd <http://github.com/LCPQ/quantum_package/tree/master/src/CISD/H_apply.irp.f#L43>`_
+`h_apply_cisd <http://github.com/LCPQ/quantum_package/tree/master/src/CISD/H_apply.irp.f#L/subroutine H_apply_cisd/;">`_
   Calls H_apply on the HF determinant and selects all connected single and double
   excitations (of the same symmetry).
 
-`cisd <http://github.com/LCPQ/quantum_package/tree/master/src/CISD/cisd.irp.f#L1>`_
+`cisd <http://github.com/LCPQ/quantum_package/tree/master/src/CISD/cisd.irp.f#L/subroutine cisd/;">`_
 None
 
 
diff --git a/src/Makefile.config.example b/src/Makefile.config.example
deleted file mode 100644
index 82e0ca27..00000000
--- a/src/Makefile.config.example
+++ /dev/null
@@ -1,29 +0,0 @@
-OPENMP  =1
-PROFILE =0
-DEBUG  = 0
-
-IRPF90_FLAGS+= --align=32
-FC     = ifort -g 
-FCFLAGS= 
-FCFLAGS+= -xHost
-#FCFLAGS+= -xAVX
-FCFLAGS+= -O2 
-FCFLAGS+= -ip 
-FCFLAGS+= -opt-prefetch
-FCFLAGS+= -ftz
-MKL=-mkl=parallel 
-
-ifeq ($(PROFILE),1)
-FC    += -p -g
-CXX   += -pg
-endif
-
-ifeq ($(OPENMP),1)
-FC    += -openmp
-CXX   += -fopenmp
-endif
-
-ifeq ($(DEBUG),1)
-FC    += -C -traceback -fpe0
-#FCFLAGS =-O0
-endif
diff --git a/src/README.rst b/src/README.rst
index 9c6b5bcb..9df7f557 100644
--- a/src/README.rst
+++ b/src/README.rst
@@ -130,3 +130,11 @@ Needed Modules
 * `DensityMatrix <http://github.com/LCPQ/quantum_package/tree/master/src/DensityMatrix>`_
 * `CISD <http://github.com/LCPQ/quantum_package/tree/master/src/CISD>`_
 
+Documentation
+=============
+
+.. Do not edit this section. It was auto-generated from the
+.. NEEDED_MODULES file.
+
+
+