mirror of
https://github.com/LCPQ/quantum_package
synced 2025-01-03 18:16:12 +01:00
BiInt => Bielec_integrals
This commit is contained in:
parent
951a4e35e0
commit
0a8d393dbc
@ -1,9 +0,0 @@
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bielec_integrals
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read_ao_integrals False
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read_mo_integrals False
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write_ao_integrals False
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write_mo_integrals False
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threshold_ao 1.e-15
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threshold_mo 1.e-15
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direct False
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@ -1,5 +0,0 @@
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cisd_sc2_selected
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n_det_max_cisd_sc2 10000
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pt2_max 1.e-4
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do_pt2_end True
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@ -1,5 +1,13 @@
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#!/bin/bash
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# Convert a old ezfio file (with option.irp.f ezfio_default)
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# into a new EZFIO.cfg type
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# Hartree Fock
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# Changin the case, don't know if is needed or not
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mv $1/Hartree_Fock $1/hartree_fock
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mv $1/hartree_Fock/thresh_SCF $1/hartree_fock/thresh_scf
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mv $1/hartree_Fock/thresh_SCF $1/hartree_fock/thresh_scf
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# BiInts
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mv $1/bi_integrals $1/bielect_integrals
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@ -304,7 +304,7 @@ def save_ezfio_provider(path_head, dict_code_provider):
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l_output += [code for code in dict_code_provider.values()]
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output = "\n".join(l_output)
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output = "\n\n".join(l_output)
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if output != old_output:
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with open(path, "w") as f:
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@ -366,7 +366,8 @@ def create_ezfio_stuff(dict_ezfio_cfg, config_or_default="config"):
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for provider_name, provider_info in sorted(dict_ezfio_cfg.iteritems()):
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# Get the value from dict
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name_raw = provider_name.lower()
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name_raw = provider_info["ezfio_name"].lower()
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fortran_type_raw = provider_info["type"].fortran
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if "size" in provider_info and not provider_info["size"] == "1":
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@ -29,7 +29,6 @@ BEGIN_PROVIDER [ %(type)s, %(name)s ]
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endif
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%(write)s
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END_PROVIDER
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""".strip()
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@ -1,9 +0,0 @@
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bielec_integrals
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read_ao_integrals logical
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read_mo_integrals logical
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write_ao_integrals logical
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write_mo_integrals logical
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threshold_ao double precision
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threshold_mo double precision
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direct logical
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@ -1,46 +0,0 @@
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BEGIN_SHELL [ /usr/bin/python ]
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from ezfio_with_default import EZFIO_Provider
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T = EZFIO_Provider()
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T.set_type ( "logical" )
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T.set_name ( "do_direct_integrals" )
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T.set_doc ( "If true, compute integrals on the fly" )
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T.set_ezfio_dir ( "bielec_integrals" )
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T.set_ezfio_name( "direct" )
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T.set_output ( "output_biints" )
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print T
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T.set_type ( "logical" )
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T.set_name ( "write_mo_integrals" )
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T.set_doc ( "If true, write MO integrals in EZFIO" )
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T.set_ezfio_name( "write_mo_integrals" )
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print T
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T.set_name ( "write_ao_integrals" )
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T.set_doc ( "If true, write AO integrals in EZFIO" )
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T.set_ezfio_name( "write_ao_integrals" )
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print T
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T.set_name ( "read_mo_integrals" )
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T.set_doc ( "If true, read MO integrals in EZFIO" )
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T.set_ezfio_name( "read_mo_integrals" )
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print T
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T.set_name ( "read_ao_integrals" )
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T.set_doc ( "If true, read AO integrals in EZFIO" )
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T.set_ezfio_name( "read_ao_integrals" )
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print T
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T.set_type ( "double precision" )
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T.set_name ( "ao_integrals_threshold" )
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T.set_doc ( "If <pq|rs> < ao_integrals_threshold, <pq|rs> = 0" )
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T.set_ezfio_name( "threshold_ao" )
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print T
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T.set_name ( "mo_integrals_threshold" )
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T.set_doc ( "If <ij|kl> < mo_integrals_threshold, <ij|kl> = 0" )
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T.set_ezfio_name( "threshold_mo" )
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print T
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END_SHELL
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44
src/Bielec_integrals/EZFIO.cfg
Normal file
44
src/Bielec_integrals/EZFIO.cfg
Normal file
@ -0,0 +1,44 @@
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[do_direct_integrals]
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type: logical
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doc: If true, compute integrals on the fly
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interface: input
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default: False
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ezfio_name: direct
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[write_ao_integrals]
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type: logical
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doc: If true, write AO integrals in EZFIO
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interface: input
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default: False
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[write_mo_integrals]
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type: logical
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doc: If true, write MO integrals in EZFIO
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interface: input
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default: False
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[read_ao_integrals]
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type: logical
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doc: If true, read AO integrals in EZFIO
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interface: input
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default: False
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[read_mo_integrals]
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type: logical
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doc: If true, read MO integrals in EZFIO
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interface: input
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default: False
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[ao_integrals_threshold]
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type: Threshold
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doc: If <pq|rs> < ao_integrals_threshold => <pq|rs> = 0
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interface: input
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default: 1.e-15
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ezfio_name: threshold_ao
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[mo_integrals_threshold]
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type: Threshold
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doc: If <ij|kl> < ao_integrals_threshold => <ij|lk> = 0
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interface: input
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default: 1.e-15
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ezfio_name: threshold_mo
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@ -356,7 +356,7 @@ BEGIN_PROVIDER [ logical, ao_bielec_integrals_in_map ]
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integer :: load_ao_integrals
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print*,'Reading the AO integrals'
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if (load_ao_integrals(trim(ezfio_filename)//'/work/ao_integrals.bin') == 0) then
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write(output_BiInts,*) 'AO integrals provided'
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write(output_bielec_integrals,*) 'AO integrals provided'
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ao_bielec_integrals_in_map = .True.
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return
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endif
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@ -374,7 +374,7 @@ BEGIN_PROVIDER [ logical, ao_bielec_integrals_in_map ]
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PROVIDE progress_bar
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call omp_init_lock(lock)
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lmax = ao_num*(ao_num+1)/2
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write(output_BiInts,*) 'Providing the AO integrals'
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write(output_bielec_integrals,*) 'Providing the AO integrals'
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call wall_time(wall_0)
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call wall_time(wall_1)
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call cpu_time(cpu_1)
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@ -385,7 +385,7 @@ BEGIN_PROVIDER [ logical, ao_bielec_integrals_in_map ]
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!$OMP DEFAULT(NONE) &
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!$OMP SHARED (ao_num, jl_pairs, ao_integrals_map,thresh, &
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!$OMP cpu_1,wall_1,lock, lmax,n_centers,ao_nucl, &
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!$OMP ao_overlap_abs,ao_overlap,output_BiInts,abort_here, &
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!$OMP ao_overlap_abs,ao_overlap,output_bielec_integrals,abort_here, &
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!$OMP wall_0,progress_bar,progress_value)
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allocate(buffer_i(size_buffer))
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@ -452,7 +452,7 @@ IRP_ENDIF
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if (thread_num == 0) then
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if (wall_2 - wall_0 > 1.d0) then
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wall_0 = wall_2
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write(output_BiInts,*) 100.*float(kk)/float(lmax), '% in ', &
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write(output_bielec_integrals,*) 100.*float(kk)/float(lmax), '% in ', &
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wall_2-wall_1, 's', map_mb(ao_integrals_map) ,'MB'
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progress_value = dble(map_mb(ao_integrals_map))
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endif
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@ -469,21 +469,21 @@ IRP_ENDIF
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stop 'Aborting in AO integrals calculation'
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endif
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IRP_IF COARRAY
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write(output_BiInts,*) 'Communicating the map'
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write(output_bielec_integrals,*) 'Communicating the map'
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call communicate_ao_integrals()
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IRP_ENDIF COARRAY
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write(output_BiInts,*) 'Sorting the map'
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write(output_bielec_integrals,*) 'Sorting the map'
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call map_sort(ao_integrals_map)
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call cpu_time(cpu_2)
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call wall_time(wall_2)
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integer(map_size_kind) :: get_ao_map_size, ao_map_size
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ao_map_size = get_ao_map_size()
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write(output_BiInts,*) 'AO integrals provided:'
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write(output_BiInts,*) ' Size of AO map : ', map_mb(ao_integrals_map) ,'MB'
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write(output_BiInts,*) ' Number of AO integrals :', ao_map_size
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write(output_BiInts,*) ' cpu time :',cpu_2 - cpu_1, 's'
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write(output_BiInts,*) ' wall time :',wall_2 - wall_1, 's ( x ', (cpu_2-cpu_1)/(wall_2-wall_1+tiny(1.d0)), ' )'
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write(output_bielec_integrals,*) 'AO integrals provided:'
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write(output_bielec_integrals,*) ' Size of AO map : ', map_mb(ao_integrals_map) ,'MB'
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write(output_bielec_integrals,*) ' Number of AO integrals :', ao_map_size
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write(output_bielec_integrals,*) ' cpu time :',cpu_2 - cpu_1, 's'
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write(output_bielec_integrals,*) ' wall time :',wall_2 - wall_1, 's ( x ', (cpu_2-cpu_1)/(wall_2-wall_1+tiny(1.d0)), ' )'
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ao_bielec_integrals_in_map = .True.
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if (write_ao_integrals) then
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@ -13,7 +13,7 @@ BEGIN_PROVIDER [ type(map_type), ao_integrals_map ]
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call bielec_integrals_index(ao_num,ao_num,ao_num,ao_num,key_max)
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sze = key_max
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call map_init(ao_integrals_map,sze)
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write(output_BiInts,*) 'AO map initialized'
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write(output_bielec_integrals,*) 'AO map initialized'
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END_PROVIDER
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subroutine bielec_integrals_index(i,j,k,l,i1)
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@ -244,7 +244,7 @@ BEGIN_PROVIDER [ type(map_type), mo_integrals_map ]
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call bielec_integrals_index(mo_tot_num,mo_tot_num,mo_tot_num,mo_tot_num,key_max)
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sze = key_max
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call map_init(mo_integrals_map,sze)
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write(output_BiInts,*) 'MO map initialized'
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write(output_bielec_integrals,*) 'MO map initialized'
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END_PROVIDER
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subroutine insert_into_ao_integrals_map(n_integrals, &
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@ -31,7 +31,7 @@ BEGIN_PROVIDER [ logical, mo_bielec_integrals_in_map ]
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integer :: load_mo_integrals
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print*,'Reading the MO integrals'
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if (load_mo_integrals(trim(ezfio_filename)//'/work/mo_integrals.bin') == 0) then
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write(output_BiInts,*) 'MO integrals provided'
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write(output_bielec_integrals,*) 'MO integrals provided'
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return
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endif
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endif
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@ -84,8 +84,8 @@ subroutine add_integrals_to_map(mask_ijkl)
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call bitstring_to_list( mask_ijkl(1,4), list_ijkl(1,4), n_l, N_int )
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size_buffer = min(ao_num*ao_num*ao_num,16000000)
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write(output_BiInts,*) 'Providing the molecular integrals '
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write(output_BiInts,*) 'Buffers : ', 8.*(mo_tot_num_align*(n_j)*(n_k+1) + mo_tot_num_align +&
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write(output_bielec_integrals,*) 'Providing the molecular integrals '
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write(output_bielec_integrals,*) 'Buffers : ', 8.*(mo_tot_num_align*(n_j)*(n_k+1) + mo_tot_num_align +&
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ao_num+ao_num*ao_num+ size_buffer*3)/(1024*1024), 'MB / core'
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call wall_time(wall_1)
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@ -99,7 +99,7 @@ subroutine add_integrals_to_map(mask_ijkl)
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!$OMP wall_0,thread_num) &
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!$OMP DEFAULT(NONE) &
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!$OMP SHARED(size_buffer,ao_num,mo_tot_num,n_i,n_j,n_k,n_l,mo_tot_num_align,&
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!$OMP mo_coef_transp,output_BiInts, &
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!$OMP mo_coef_transp,output_bielec_integrals, &
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!$OMP mo_coef_transp_is_built, list_ijkl, &
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!$OMP mo_coef_is_built, wall_1, abort_here, &
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!$OMP mo_coef,mo_integrals_threshold,ao_integrals_map,mo_integrals_map,progress_bar,progress_value)
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@ -272,7 +272,7 @@ IRP_ENDIF
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if (thread_num == 0) then
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if (wall_2 - wall_0 > 1.d0) then
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wall_0 = wall_2
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write(output_BiInts,*) 100.*float(l1)/float(ao_num), '% in ', &
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write(output_bielec_integrals,*) 100.*float(l1)/float(ao_num), '% in ', &
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wall_2-wall_1, 's', map_mb(mo_integrals_map) ,'MB'
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progress_value = dble(map_mb(mo_integrals_map))
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@ -291,7 +291,7 @@ IRP_ENDIF
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stop 'Aborting in MO integrals calculation'
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endif
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IRP_IF COARRAY
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write(output_BiInts,*) 'Communicating the map'
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write(output_bielec_integrals,*) 'Communicating the map'
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call communicate_mo_integrals()
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IRP_ENDIF
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call map_unique(mo_integrals_map)
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@ -304,11 +304,11 @@ IRP_ENDIF
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deallocate(list_ijkl)
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write(output_BiInts,*)'Molecular integrals provided:'
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write(output_BiInts,*)' Size of MO map ', map_mb(mo_integrals_map) ,'MB'
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write(output_BiInts,*)' Number of MO integrals: ', mo_map_size
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write(output_BiInts,*)' cpu time :',cpu_2 - cpu_1, 's'
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write(output_BiInts,*)' wall time :',wall_2 - wall_1, 's ( x ', (cpu_2-cpu_1)/(wall_2-wall_1), ')'
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write(output_bielec_integrals,*)'Molecular integrals provided:'
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write(output_bielec_integrals,*)' Size of MO map ', map_mb(mo_integrals_map) ,'MB'
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write(output_bielec_integrals,*)' Number of MO integrals: ', mo_map_size
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write(output_bielec_integrals,*)' cpu time :',cpu_2 - cpu_1, 's'
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write(output_bielec_integrals,*)' wall time :',wall_2 - wall_1, 's ( x ', (cpu_2-cpu_1)/(wall_2-wall_1), ')'
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if (write_mo_integrals) then
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call dump_mo_integrals(trim(ezfio_filename)//'/work/mo_integrals.bin')
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files Generators_CAS Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full Utils
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AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Generators_CAS Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full Utils
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@ -1,3 +1,3 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask CISD CISD_selected Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask CISD CISD_selected Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask CISD Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask CISD Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask CISD CISD_selected Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask CISD CISD_selected Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask CISD Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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AOs Bielec_integrals Bitmask CISD Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files Generators_CAS Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full Utils
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AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Generators_CAS Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full Utils
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@ -1 +1 @@
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AOs BiInts Bitmask Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
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AOs Bielec_integrals Bitmask Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
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@ -1 +1 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
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AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
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@ -1,2 +1,2 @@
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AOs BiInts Bitmask Dets Electrons Ezfio_files Generators_full Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Generators_full Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full Utils
|
||||
|
||||
|
@ -1 +1 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
|
@ -1,2 +1,2 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Utils
|
||||
|
||||
|
@ -1 +1 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
|
@ -1 +1 @@
|
||||
AOs BiInts Bitmask Electrons Ezfio_files MonoInts MOGuess MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Electrons Ezfio_files MonoInts MOGuess MOs Nuclei Output Utils
|
||||
|
@ -1,2 +1,2 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Perturbation Properties Selectors_full SingleRefMethod Utils
|
||||
|
||||
|
@ -1 +1 @@
|
||||
AOs BiInts Bitmask CID CID_SC2_selected CID_selected CIS CISD CISD_selected CISD_SC2_selected Dets Electrons Ezfio_files Full_CI Generators_full Hartree_Fock MOGuess MonoInts MOs MP2 Nuclei Output Selectors_full Utils Molden FCIdump Generators_CAS CAS_SD_selected DDCI_selected
|
||||
AOs Bielec_integrals Bitmask CID CID_SC2_selected CID_selected CIS CISD CISD_selected CISD_SC2_selected Dets Electrons Ezfio_files Full_CI Generators_full Hartree_Fock MOGuess MonoInts MOs MP2 Nuclei Output Selectors_full Utils Molden FCIdump Generators_CAS CAS_SD_selected DDCI_selected
|
||||
|
@ -1,2 +1,2 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Properties Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Properties Utils
|
||||
|
||||
|
@ -1 +1 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
|
@ -1,2 +1,2 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files Hartree_Fock MOGuess MonoInts MOs Nuclei Output Utils
|
||||
|
||||
|
@ -1 +1 @@
|
||||
AOs BiInts Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
AOs Bielec_integrals Bitmask Dets Electrons Ezfio_files MonoInts MOs Nuclei Output Utils
|
||||
|
@ -82,6 +82,14 @@ def run_hf(geo, basis):
|
||||
# ~#~#~#~#~#~#~#~#~#~#~#~#~ #
|
||||
# S e t _ p a r a m e t e r #
|
||||
# ~#~#~#~#~#~#~#~#~#~#~#~#~ #
|
||||
ezfio.bielec_integrals_direct = False
|
||||
ezfio.bielec_integrals_threshold_ao = 1.e-15
|
||||
ezfio.bielec_integrals_write_ao_integrals = False
|
||||
ezfio.bielec_integrals_read_ao_integrals = False
|
||||
|
||||
ezfio.bielec_integrals_threshold_mo = 1.e-15
|
||||
ezfio.bielec_integrals_write_mo_integrals = False
|
||||
ezfio.bielec_integrals_read_mo_integrals = False
|
||||
|
||||
ezfio.hartree_fock_mo_guess_type = "Huckel"
|
||||
ezfio.hartree_fock_thresh_scf = 1.e-10
|
||||
|
Loading…
Reference in New Issue
Block a user