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quantum_package/ocaml/qp_set_ddci.ml

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OCaml
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open Qputils;;
open Qptypes;;
open Core.Std;;
(*
* Command-line arguments
* ----------------------
*)
let build_mask from upto n_int =
let from = MO_number.to_int from
and upto = MO_number.to_int upto
and n_int = N_int_number.to_int n_int
in
let rec build_mask bit = function
| 0 -> []
| i ->
if ( i = upto ) then
Bit.One::(build_mask Bit.One (i-1))
else if ( i = from ) then
Bit.One::(build_mask Bit.Zero (i-1))
else
bit::(build_mask bit (i-1))
in
let starting_bit =
if ( (upto >= n_int*64) || (upto < 0) ) then Bit.One
else Bit.Zero
in
build_mask starting_bit (n_int*64)
|> List.rev
;;
let failure s = raise (Failure s)
;;
type t =
| Core
| Inactive
| Active
| Virtual
| Deleted
| None
;;
let t_to_string = function
| Core -> "core"
| Inactive -> "inactive"
| Active -> "active"
| Virtual -> "virtual"
| Deleted -> "deleted"
| None -> assert false
;;
let run ?(core="[]") ?(inact="[]") ?(act="[]") ?(virt="[]") ?(del="[]") ezfio_filename =
Ezfio.set_file ezfio_filename ;
if not (Ezfio.has_mo_basis_mo_tot_num ()) then
failure "mo_basis/mo_tot_num not found" ;
let mo_tot_num = Ezfio.get_mo_basis_mo_tot_num () in
let n_int =
try N_int_number.of_int (Ezfio.get_determinants_n_int ())
with _ -> Bitlist.n_int_of_mo_tot_num mo_tot_num
in
let mo_class = Array.init mo_tot_num ~f:(fun i -> None) in
(* Check input data *)
let apply_class l =
let rec apply_class t = function
| [] -> ()
| k::tail -> let i = MO_number.to_int k in
begin
match mo_class.(i-1) with
| None -> mo_class.(i-1) <- t ;
apply_class t tail;
| x -> failure
(Printf.sprintf "Orbital %d is defined both in the %s and %s spaces"
i (t_to_string x) (t_to_string t))
end
in
match l with
| MO_class.Core x -> apply_class Core x
| MO_class.Inactive x -> apply_class Inactive x
| MO_class.Active x -> apply_class Active x
| MO_class.Virtual x -> apply_class Virtual x
| MO_class.Deleted x -> apply_class Deleted x
in
let core_input = core in
let core = MO_class.create_core core in
let inact = MO_class.create_inactive inact in
let act = MO_class.create_active act in
let virt = MO_class.create_virtual virt in
let del = MO_class.create_deleted del in
apply_class core ;
apply_class inact ;
apply_class act ;
apply_class virt ;
apply_class del ;
for i=1 to (Array.length mo_class)
do
if (mo_class.(i-1) = None) then
failure (Printf.sprintf "Orbital %d is not specified (mo_tot_num = %d)" i mo_tot_num)
done;
(* Debug output *)
MO_class.to_string core |> print_endline ;
MO_class.to_string inact |> print_endline ;
MO_class.to_string act |> print_endline ;
MO_class.to_string virt |> print_endline ;
MO_class.to_string del |> print_endline ;
(* Create masks *)
let ia = Excitation.create_single inact act
and aa = Excitation.create_single act act
and av = Excitation.create_single act virt
and iv = Excitation.create_single inact virt
in
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let single_excitations = [| ia ; aa ; av ; iv |]
|> Array.map ~f:Excitation.(fun x ->
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match x with
| Single (x,y) ->
( MO_class.to_bitlist n_int (Hole.to_mo_class x),
MO_class.to_bitlist n_int (Particle.to_mo_class y) )
| Double _ -> assert false
)
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and double_excitations = [|
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Excitation.double_of_singles ia ia ;
Excitation.double_of_singles ia aa ;
Excitation.double_of_singles ia iv ;
Excitation.double_of_singles ia av ;
Excitation.double_of_singles aa aa ;
Excitation.double_of_singles aa iv ;
Excitation.double_of_singles aa av ;
Excitation.double_of_singles iv aa ;
Excitation.double_of_singles iv av ;
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(* Excitation.double_of_singles iv iv ; *)
|]
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|> Array.map ~f:Excitation.(fun x ->
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match x with
| Single _ -> assert false
| Double (x,y,z,t) ->
( MO_class.to_bitlist n_int (Hole.to_mo_class x),
MO_class.to_bitlist n_int (Particle.to_mo_class y) ,
MO_class.to_bitlist n_int (Hole.to_mo_class z),
MO_class.to_bitlist n_int (Particle.to_mo_class t) )
)
in
let extract_hole (h,_) = h
and extract_particle (_,p) = p
and extract_hole1 (h,_,_,_) = h
and extract_particle1 (_,p,_,_) = p
and extract_hole2 (_,_,h,_) = h
and extract_particle2 (_,_,_,p) = p
in
(* --> TODO : This might be wrong *)
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let result_ref =
let core = MO_class.create_inactive core_input in
let cv = Excitation.create_single core virt in
let cv = match cv with
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| Excitation.Single (x,y) ->
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( MO_class.to_bitlist n_int (Excitation.Hole.to_mo_class x),
MO_class.to_bitlist n_int (Excitation.Particle.to_mo_class y) )
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| Excitation.Double _ -> assert false
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in
let iv = match iv with
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| Excitation.Single (x,y) ->
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( MO_class.to_bitlist n_int (Excitation.Hole.to_mo_class x),
MO_class.to_bitlist n_int (Excitation.Particle.to_mo_class y) )
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| Excitation.Double _ -> assert false
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in
[ Bitlist.or_operator (extract_hole iv) (extract_hole cv);
extract_particle iv ]
in
(* <-- TODO : This might be wrong *)
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let n_single = Array.length single_excitations in
let n_mask = Array.length double_excitations in
let zero = List.init (N_int_number.to_int n_int) ~f:(fun i -> 0L)
|> Bitlist.of_int64_list in
let result_gen = (List.init n_single ~f:(fun i-> [
extract_hole single_excitations.(i) ;
extract_particle single_excitations.(i) ;
extract_hole1 double_excitations.(i) ;
extract_particle1 double_excitations.(i) ;
extract_hole2 double_excitations.(i) ;
extract_particle2 double_excitations.(i) ; ])
)@(List.init (n_mask-n_single) ~f:(fun i-> [
zero ; zero ;
extract_hole1 double_excitations.(n_single+i) ;
extract_particle1 double_excitations.(n_single+i) ;
extract_hole2 double_excitations.(n_single+i) ;
extract_particle2 double_excitations.(n_single+i) ; ])
)
|> List.concat
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in
(* Print bitmasks *)
print_endline "Reference Bitmasks:";
List.iter ~f:(fun x-> print_endline (Bitlist.to_string x)) result_ref;
print_endline "Generators Bitmasks:";
List.iter ~f:(fun x-> print_endline (Bitlist.to_string x)) result_gen;
(* Transform to int64 *)
let result_gen = List.map ~f:(fun x ->
let y = Bitlist.to_int64_list x in y@y )
result_gen
|> List.concat
in
let result_ref = List.map ~f:(fun x ->
let y = Bitlist.to_int64_list x in y@y )
result_ref
|> List.concat
in
(* Write generators masks *)
Ezfio.set_bitmasks_n_int (N_int_number.to_int n_int);
Ezfio.set_bitmasks_bit_kind 8;
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Ezfio.set_bitmasks_n_mask_gen n_mask;
Ezfio.ezfio_array_of_list ~rank:4 ~dim:([| (N_int_number.to_int n_int) ; 2; 6; n_mask|]) ~data:result_gen
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|> Ezfio.set_bitmasks_generators ;
(* Write CAS reference masks *)
Ezfio.set_bitmasks_n_mask_cas 1;
Ezfio.ezfio_array_of_list ~rank:3 ~dim:([| (N_int_number.to_int n_int) ; 2; 1|]) ~data:result_ref
|> Ezfio.set_bitmasks_cas ;
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;;
let ezfio_file =
let failure filename =
eprintf "'%s' is not an EZFIO file.\n%!" filename;
exit 1
in
Command.Spec.Arg_type.create
(fun filename ->
match Sys.is_directory filename with
| `Yes ->
begin
match Sys.is_file (filename ^ "/.version") with
| `Yes -> filename
| _ -> failure filename
end
| _ -> failure filename
)
;;
let default range =
let failure filename =
eprintf "'%s' is not a regular file.\n%!" filename;
exit 1
in
Command.Spec.Arg_type.create
(fun filename ->
match Sys.is_directory filename with
| `Yes ->
begin
match Sys.is_file (filename^"/.version") with
| `Yes -> filename
| _ -> failure filename
end
| _ -> failure filename
)
;;
let spec =
let open Command.Spec in
empty
+> flag "core" (optional string) ~doc:"range Range of core orbitals"
+> flag "inact" (optional string) ~doc:"range Range of inactive orbitals"
+> flag "act" (optional string) ~doc:"range Range of active orbitals"
+> flag "virt" (optional string) ~doc:"range Range of virtual orbitals"
+> flag "del" (optional string) ~doc:"range Range of deleted orbitals"
+> anon ("ezfio_filename" %: ezfio_file)
;;
let command =
Command.basic
~summary: "Quantum Package command"
~readme:(fun () ->
"Set the orbital classes in an EZFIO directory
The range of MOs has the form : \"[36-53,72-107,126-131]\"
")
spec
(fun core inact act virt del ezfio_filename () -> run ?core ?inact ?act ?virt ?del ezfio_filename )
;;
let () =
Command.run command