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quantum_package/scripts/module/module_handler.py

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#!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
Create the NEEDED_MODULE
aka the genealogy (children module, subchildren module and so on),
of a NEEDED_CHILDREN_MODULES file
Usage:
module_handler.py print_genealogy [<NEEDED_CHILDREN_MODULES>]
module_handler.py create_png [<NEEDED_CHILDREN_MODULES>]
Options:
print_genealogy Print the genealogy of the NEEDED_CHILDREN_MODULES
aka (children, subchildren, etc)
create_png Create a png of the file
NEEDED_CHILDREN_MODULES The path of NEEDED_CHILDREN_MODULES
by default try to open the file in the current path
"""
from docopt import docopt
import os
import sys
import os.path
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from collections import namedtuple
Dependancy = namedtuple('Dependancy', ['src', 'obj'])
Module_info = namedtuple('Module_info', ['l_children', 'l_dependancy'])
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def get_list_from_makefile(data, sep):
# Split for sep
dump = [l.split(sep)[1] for l in data if l.startswith(sep)]
# Delete the empy one
l_unique = [k for k in map(str.strip, dump) if k]
# Return the flat one (if multi in l_unique)
l_flat = [j for i in l_unique for j in i.split()]
return l_flat
# Canot cache for a fucking raison
def get_dict_genealogy():
"""Loop over MODULE in QPACKAGE_ROOT/src, open all the NEEDED_CHILDREN_MODULES
and create a dict[MODULE] = [sub module needed, ...]
"""
d_ref = dict()
qpackage_root = os.environ['QPACKAGE_ROOT']
dir_ = os.path.join(qpackage_root, 'src')
for o in os.listdir(dir_):
try:
with open(os.path.join(dir_, o, "NEEDED_CHILDREN_MODULES"), "r") as f:
l_children = f.read().split()
except IOError:
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continue
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try:
with open(os.path.join(dir_, o, "Makefile"), "r") as f:
data = f.readlines()
l_depend = Dependancy(get_list_from_makefile(data, "SRC="),
get_list_from_makefile(data, "OBJ="))
except IOError:
l_depend = []
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d_ref[o] = Module_info(l_children, l_depend)
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return d_ref
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def him_and_all_children(d_ref, l_module):
"""
From a list of module return the module and all of the genealogy
"""
l = []
for module in l_module:
if module not in l:
l.append(module)
try:
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l.extend(him_and_all_children(d_ref, d_ref[module].l_children))
except KeyError:
print >> sys.stderr, "`{0}` in not a good submodule name".format(module)
print >> sys.stderr, "Check the corresponding NEEDED_CHILDREN_MODULES"
sys.exit(1)
return list(set(l))
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def module_genealogy(module_name):
"""
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Take a name of a NEEDED_CHILDREN_MODULES
and return a list of all the {sub, subsub, ...}children
"""
d_ref = get_dict_genealogy()
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return him_and_all_children(d_ref, d_ref[module_name].l_children)
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def file_dependancy(module_name):
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d_ref = get_dict_genealogy()
l_src, l_obj = d_ref[module_name].l_dependancy
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l_children_module = him_and_all_children(d_ref, d_ref[module_name].l_children)
for module in l_children_module:
l_src_dump, l_obj_dump = d_ref[module].l_dependancy
l_src.extend("{0}/{1}".format(module, i) for i in l_src_dump)
l_obj.extend("IRPF90_temp/{0}/{1}".format(module, os.path.basename(i)) for i in l_obj_dump)
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return Dependancy(l_src, l_obj)
def create_png_from_path(path):
" Change a path like this into a module list"
"path = /home/razoa/quantum_package/src/Molden/NEEDED_CHILDREN_MODULES"
l_module = os.path.split(path)[0].split("/")[-1]
import pydot
try:
create_png([l_module])
except pydot.InvocationException:
pass
def create_png(l_module):
"""Create the png of the dependancy tree for a l_module"""
# Init
import pydot
all_ready_done = []
def draw_module_edge(module, l_children):
"Draw all the module recursifly"
if module not in all_ready_done:
for children in l_children:
# Add Edge
edge = pydot.Edge(module, children)
graph.add_edge(edge)
# Recurs
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draw_module_edge(children, d_ref[children].l_children)
all_ready_done.append(module)
# Init
graph = pydot.Dot(graph_type='digraph')
d_ref = get_dict_genealogy()
# Create all the edge
for module in l_module:
node_a = pydot.Node(module, fontcolor="red")
graph.add_node(node_a)
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draw_module_edge(module, d_ref[module].l_children)
# Save
path = '{0}.png'.format("tree_dependancy")
# path = '{0}.png'.format("_".join(l_module))
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# print "png saved in {0}".format(path)
graph.write_png(path)
if __name__ == '__main__':
arguments = docopt(__doc__)
if not arguments['<NEEDED_CHILDREN_MODULES>']:
dir_ = os.getcwd()
path_file = os.path.split(dir_)[1]
else:
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path_file = os.path.abspath(arguments['<NEEDED_CHILDREN_MODULES>'])
path_file = os.path.expanduser(path_file)
path_file = os.path.expandvars(path_file)
dir_ = os.path.dirname(path_file)
if arguments['print_genealogy']:
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l_all_needed_molule = module_genealogy(path_file)
print " ".join(sorted(l_all_needed_molule))
if arguments["create_png"]:
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create_png_from_path(path_file)