mirror of
https://github.com/LCPQ/quantum_package
synced 2024-12-23 12:56:14 +01:00
462 lines
15 KiB
ReStructuredText
462 lines
15 KiB
ReStructuredText
|
Needed Modules
|
||
|
==============
|
||
|
.. Do not edit this section It was auto-generated
|
||
|
.. by the `update_README.py` script.
|
||
|
|
||
|
|
||
|
.. image:: tree_dependency.png
|
||
|
|
||
|
* `Perturbation <http://github.com/LCPQ/quantum_package/tree/master/plugins/Perturbation>`_
|
||
|
* `Selectors_full <http://github.com/LCPQ/quantum_package/tree/master/plugins/Selectors_full>`_
|
||
|
* `Generators_full <http://github.com/LCPQ/quantum_package/tree/master/plugins/Generators_full>`_
|
||
|
* `ZMQ <http://github.com/LCPQ/quantum_package/tree/master/src/ZMQ>`_
|
||
|
* `Full_CI <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI>`_
|
||
|
|
||
|
Documentation
|
||
|
=============
|
||
|
.. Do not edit this section It was auto-generated
|
||
|
.. by the `update_README.py` script.
|
||
|
|
||
|
|
||
|
`add_task_to_taskserver <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L677>`_
|
||
|
Get a task from the task server
|
||
|
|
||
|
|
||
|
`add_to_selection_buffer <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_buffer.irp.f#L19>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`assert <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection.irp.f#L25>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`connect_to_taskserver <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L594>`_
|
||
|
Connect to the task server and obtain the worker ID
|
||
|
|
||
|
|
||
|
`create_selection_buffer <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_buffer.irp.f#L2>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`disconnect_from_taskserver <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L637>`_
|
||
|
Disconnect from the task server
|
||
|
|
||
|
|
||
|
`end_parallel_job <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L559>`_
|
||
|
End a new parallel job with name 'name'. The slave tasks execute subroutine 'slave'
|
||
|
|
||
|
|
||
|
`end_zmq_pair_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L419>`_
|
||
|
Terminate socket on which the results are sent.
|
||
|
|
||
|
|
||
|
`end_zmq_pull_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L437>`_
|
||
|
Terminate socket on which the results are sent.
|
||
|
|
||
|
|
||
|
`end_zmq_push_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L456>`_
|
||
|
Terminate socket on which the results are sent.
|
||
|
|
||
|
|
||
|
`end_zmq_sub_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L401>`_
|
||
|
Terminate socket on which the results are sent.
|
||
|
|
||
|
|
||
|
`end_zmq_to_qp_run_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L790>`_
|
||
|
Terminate the socket from the application to qp_run
|
||
|
|
||
|
|
||
|
`fci_zmq <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/fci_zmq.irp.f#L1>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`fill_buffer_double <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L156>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`fill_buffer_single <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L60>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`full_ci <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/full_ci_no_skip.irp.f#L1>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_d0 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L582>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_d1 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L413>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_d2 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L295>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_m0 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L279>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_m1 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L217>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_m2 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L158>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_mask_phase <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection.irp.f#L36>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_phase_bi <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection.irp.f#L87>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`get_task_from_taskserver <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L737>`_
|
||
|
Get a task from the task server
|
||
|
|
||
|
|
||
|
h_apply_fci
|
||
|
Calls H_apply on the HF determinant and selects all connected single and double
|
||
|
excitations (of the same symmetry). Auto-generated by the ``generate_h_apply`` script.
|
||
|
|
||
|
|
||
|
h_apply_fci_diexc
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_diexcorg
|
||
|
Generate all double excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_diexcp
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_mono
|
||
|
Calls H_apply on the HF determinant and selects all connected single and double
|
||
|
excitations (of the same symmetry). Auto-generated by the ``generate_h_apply`` script.
|
||
|
|
||
|
|
||
|
h_apply_fci_mono_diexc
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_mono_diexcorg
|
||
|
Generate all double excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_mono_diexcp
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_mono_monoexc
|
||
|
Generate all single excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_monoexc
|
||
|
Generate all single excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_no_selection
|
||
|
Calls H_apply on the HF determinant and selects all connected single and double
|
||
|
excitations (of the same symmetry). Auto-generated by the ``generate_h_apply`` script.
|
||
|
|
||
|
|
||
|
h_apply_fci_no_selection_diexc
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_no_selection_diexcorg
|
||
|
Generate all double excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_no_selection_diexcp
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_no_selection_monoexc
|
||
|
Generate all single excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_no_skip
|
||
|
Calls H_apply on the HF determinant and selects all connected single and double
|
||
|
excitations (of the same symmetry). Auto-generated by the ``generate_h_apply`` script.
|
||
|
|
||
|
|
||
|
h_apply_fci_no_skip_diexc
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_no_skip_diexcorg
|
||
|
Generate all double excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_no_skip_diexcp
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_no_skip_monoexc
|
||
|
Generate all single excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2
|
||
|
Calls H_apply on the HF determinant and selects all connected single and double
|
||
|
excitations (of the same symmetry). Auto-generated by the ``generate_h_apply`` script.
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_collector
|
||
|
Collects results from the selection in an array of generators
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_diexc
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_diexcorg
|
||
|
Generate all double excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_diexcp
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_monoexc
|
||
|
Generate all single excitations of key_in using the bit masks of holes and
|
||
|
particles.
|
||
|
Assume N_int is already provided.
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_slave
|
||
|
Calls H_apply on the HF determinant and selects all connected single and double
|
||
|
excitations (of the same symmetry). Auto-generated by the ``generate_h_apply`` script.
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_slave_inproc
|
||
|
Computes a buffer using threads
|
||
|
|
||
|
|
||
|
h_apply_fci_pt2_slave_tcp
|
||
|
Computes a buffer over the network
|
||
|
|
||
|
|
||
|
`integral8 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection.irp.f#L4>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`new_parallel_job <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L490>`_
|
||
|
Start a new parallel job with name 'name'. The slave tasks execute subroutine 'slave'
|
||
|
|
||
|
|
||
|
`new_zmq_pair_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L164>`_
|
||
|
Socket on which the collector and the main communicate
|
||
|
|
||
|
|
||
|
`new_zmq_pull_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L224>`_
|
||
|
Socket on which the results are sent. If thread is 1, use inproc
|
||
|
|
||
|
|
||
|
`new_zmq_push_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L300>`_
|
||
|
Socket on which the results are sent. If thread is 1, use inproc
|
||
|
|
||
|
|
||
|
`new_zmq_sub_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L360>`_
|
||
|
Socket to read the state published by the Task server
|
||
|
|
||
|
|
||
|
`new_zmq_to_qp_run_socket <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L126>`_
|
||
|
Socket on which the qp_run process replies
|
||
|
|
||
|
|
||
|
`past_d1 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L642>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`past_d2 <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L658>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`provide_everything <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_slave.irp.f#L14>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`psi_phasemask <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection.irp.f#L14>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`pull_selection_results <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/run_selection_slave.irp.f#L122>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`push_selection_results <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/run_selection_slave.irp.f#L87>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`qp_run_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L19>`_
|
||
|
Address of the qp_run socket
|
||
|
Example : tcp://130.120.229.139:12345
|
||
|
|
||
|
|
||
|
`reset_zmq_addresses <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L67>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`run_selection_slave <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/run_selection_slave.irp.f#L2>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`run_wf <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_slave.irp.f#L19>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`select_connected <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection.irp.f#L58>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`select_doubles <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L2>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`select_singles <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L3>`_
|
||
|
Select determinants connected to i_det by H
|
||
|
|
||
|
|
||
|
`selection_collector <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/fci_zmq.irp.f#L167>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`selection_slave <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_slave.irp.f#L1>`_
|
||
|
Helper program to compute the PT2 in distributed mode.
|
||
|
|
||
|
|
||
|
`selection_slave_inproc <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/fci_zmq.irp.f#L160>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`selection_slave_tcp <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_slave.irp.f#L86>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`sort_selection_buffer <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_buffer.irp.f#L39>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`splash_p <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L107>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`splash_pq <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L221>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`spot_hasbeen <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_single.irp.f#L305>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`spot_isinwf <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_double.irp.f#L684>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`switch_qp_run_to_master <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L84>`_
|
||
|
Address of the master qp_run socket
|
||
|
Example : tcp://130.120.229.139:12345
|
||
|
|
||
|
|
||
|
`task_done_to_taskserver <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L708>`_
|
||
|
Get a task from the task server
|
||
|
|
||
|
|
||
|
`update_energy <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/selection_slave.irp.f#L63>`_
|
||
|
Update energy when it is received from ZMQ
|
||
|
|
||
|
|
||
|
`var_pt2_ratio_run <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/var_pt2_ratio.irp.f#L1>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`wait_for_next_state <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L855>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`wait_for_state <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L879>`_
|
||
|
Wait for the ZMQ state to be ready
|
||
|
|
||
|
|
||
|
`wait_for_states <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L907>`_
|
||
|
Wait for the ZMQ state to be ready
|
||
|
|
||
|
|
||
|
`zmq_context <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L8>`_
|
||
|
Context for the ZeroMQ library
|
||
|
|
||
|
|
||
|
`zmq_delete_task <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L813>`_
|
||
|
When a task is done, it has to be removed from the list of tasks on the qp_run
|
||
|
queue. This guarantees that the results have been received in the pull.
|
||
|
|
||
|
|
||
|
`zmq_port <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L113>`_
|
||
|
Return the value of the ZMQ port from the corresponding integer
|
||
|
|
||
|
|
||
|
`zmq_port_start <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L20>`_
|
||
|
Address of the qp_run socket
|
||
|
Example : tcp://130.120.229.139:12345
|
||
|
|
||
|
|
||
|
`zmq_selection <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/fci_zmq.irp.f#L109>`_
|
||
|
Undocumented
|
||
|
|
||
|
|
||
|
`zmq_set_running <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L530>`_
|
||
|
Set the job to Running in QP-run
|
||
|
|
||
|
|
||
|
`zmq_socket_pair_inproc_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L45>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`zmq_socket_pull_inproc_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L47>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`zmq_socket_pull_tcp_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L44>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`zmq_socket_push_inproc_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L48>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`zmq_socket_push_tcp_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L46>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`zmq_socket_sub_tcp_address <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L49>`_
|
||
|
Socket which pulls the results (2)
|
||
|
|
||
|
|
||
|
`zmq_state <http://github.com/LCPQ/quantum_package/tree/master/plugins/Full_CI_ZMQ/utils.irp.f#L482>`_
|
||
|
Threads executing work through the ZeroMQ interface
|
||
|
|