#!/bin/bash # # Quantum Package configuration script # TEMP=$(getopt -o c:i:h -l config:,install:,help -n $0 -- "$@") || exit 1 eval set -- "$TEMP" export QP_ROOT="$( cd "$(dirname "$0")" ; pwd -P )" echo "QP_ROOT="$QP_ROOT # /!\ When updating version, update also etc files EZFIO_TGZ="EZFIO.1.6.2.tar.gz" BATS_URL="https://github.com/bats-core/bats-core/archive/v1.1.0.tar.gz" BUBBLE_URL="https://github.com/projectatomic/bubblewrap/releases/download/v0.3.3/bubblewrap-0.3.3.tar.xz" DOCOPT_URL="https://github.com/docopt/docopt/archive/0.6.2.tar.gz" BSE_URL="https://github.com/MolSSI-BSE/basis_set_exchange/archive/v0.8.11.tar.gz" F77ZMQ_URL="https://github.com/scemama/f77_zmq/archive/v4.2.5.tar.gz" GMP_URL="ftp://ftp.gnu.org/gnu/gmp/gmp-6.1.2.tar.bz2" IRPF90_URL="https://gitlab.com/scemama/irpf90/-/archive/v1.7.6/irpf90-v1.7.6.tar.gz" LIBCAP_URL="https://git.kernel.org/pub/scm/linux/kernel/git/morgan/libcap.git/snapshot/libcap-2.25.tar.gz" NINJA_URL="https://github.com/ninja-build/ninja/releases/download/v1.8.2/ninja-linux.zip" OCAML_URL="https://raw.githubusercontent.com/ocaml/opam/master/shell/install.sh" RESULTS_URL="https://gitlab.com/scemama/resultsFile/-/archive/v1.0/resultsFile-v1.0.tar.gz" ZEROMQ_URL="https://github.com/zeromq/libzmq/releases/download/v4.2.5/zeromq-4.2.5.tar.gz" ZLIB_URL="https://www.zlib.net/zlib-1.2.11.tar.gz" function help() { cat < | --config= $(basename $0) -h | --help $(basename $0) -i | --install= Options: -c, --config= Define a COMPILATION configuration file, in "${QP_ROOT}/config/". -h, --help Print the HELP message -i, --install= INSTALL . Use at your OWN RISK: no support will be provided for the installation of dependencies. Example: ./$(basename $0) -c config/gfortran.cfg Note: Users are encouraged to create their own configuration files instead of modifying the existing ones. EOF exit } function error() { >&2 echo "$(basename $0): $@" exit 2 } function execute () { local _command echo "Executing:" while read -r line; do echo " " $line _command+="${line} ;" done sleep 1 echo "" printf "\e[0;94m" ( eval "set -x ; $_command set +x" ) || exit -1 printf "\e[m" echo "" } PACKAGES="" OCAML_PACKAGES="ocamlbuild cryptokit zmq sexplib ppx_sexp_conv ppx_deriving getopt" while true ; do case "$1" in -c|--config) case "$2" in "") help ; break;; *) if [[ -f $2 ]] ; then CONFIG="$2" else error "error: configuration file $2 not found." exit 1 fi esac shift 2;; -i|--install) case "$2" in "") help ; break;; *) PACKAGES="${PACKAGES} $2" esac shift 2;; -h|-help|--help) help exit 0;; --) shift ; break ;; *) error $(basename $0)": unknown option $1, try --help" exit 2;; esac done # Trim leading and trailing spaces PACKAGES=$(echo $PACKAGES | xargs) echo "export QP_ROOT=\"$QP_ROOT\"" > ${QP_ROOT}/etc/00.qp_root.rc source quantum_package.rc function fail() { echo "You can try to install it using the -i option." echo "Please refer to INSTALL.rst to install the missing dependencies." exit 1 } function success() { echo "" echo "Configuration successful." exit 1 } function download() { echo "Downloading $1" echo "" printf "\e[0;34m" wget --no-check-certificate $1 --output-document=$2 || error "Unable to download $1" printf "\e[m" echo "Saved dowloaded file as $2" echo "" } function not_found() { echo 'not_found' } function find_exe() { which $1 2> /dev/null || not_found } function find_python_lib() { python2 -c "import $1" &> /dev/null && echo "$1" || not_found } function find_lib() { echo "int main() { return 0; }" > "${QP_ROOT}"/external/tmp.c gcc $@ "${QP_ROOT}"/external/tmp.c -o "${QP_ROOT}"/external/tmp.exe 2> /dev/null if [[ -x "${QP_ROOT}"/external/tmp.exe ]] ; then rm "${QP_ROOT}"/external/tmp.exe "${QP_ROOT}"/external/tmp.c echo "$lib" else rm "${QP_ROOT}"/external/tmp.c not_found fi } function find_dir() { if [[ -d $1 ]] ; then echo "$1" else not_found fi } # Extract EZFIO if needed EZFIO=$(find_dir "${QP_ROOT}"/external/ezfio) if [[ ${EZFIO} = $(not_found) ]] ; then execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file ${EZFIO_TGZ} rm -rf ezfio mv EZFIO ezfio EOF fi if [[ "${PACKAGES}.x" != ".x" ]] ; then printf "\e[0;31m" echo "" echo "#########################################################" echo "# #" echo "# Automatic installation of dependencies #" echo "# #" echo "# USE AT YOUR OWN RISK : #" echo "# No support will be provided by the quantum package #" echo "# developers for the installation of external software. #" echo "# #" echo "# You may refer to the INSTALL.rst file for help. #" echo "# #" echo "#########################################################" printf "\e[m" echo "" sleep 1 fi if [[ ${PACKAGES} = all ]] ; then PACKAGES="zlib ninja irpf90 zeromq f77zmq gmp libcap bwrap opam opam_packages ezfio docopt resultsFile bats" fi for PACKAGE in ${PACKAGES} ; do if [[ ${PACKAGE} = ninja ]] ; then download ${NINJA_URL} "${QP_ROOT}"/external/ninja.zip execute << EOF rm -f "\${QP_ROOT}"/bin/ninja unzip "\${QP_ROOT}"/external/ninja.zip -d "\${QP_ROOT}"/bin EOF elif [[ ${PACKAGE} = gmp ]] ; then download ${GMP_URL} "${QP_ROOT}"/external/gmp.tar.bz2 execute << EOF cd "\${QP_ROOT}"/external tar --bzip2 --extract --file gmp.tar.bz2 rm gmp.tar.bz2 cd gmp* ./configure --prefix=$QP_ROOT && make -j 8 make install EOF elif [[ ${PACKAGE} = libcap ]] ; then download ${LIBCAP_URL} "${QP_ROOT}"/external/libcap.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file libcap.tar.gz rm libcap.tar.gz cd libcap-*/libcap prefix=$QP_ROOT make install EOF elif [[ ${PACKAGE} = bwrap ]] ; then download ${BUBBLE_URL} "${QP_ROOT}"/external/bwrap.tar.xz execute << EOF cd "\${QP_ROOT}"/external tar --xz --extract --file bwrap.tar.xz rm bwrap.tar.xz cd bubblewrap* ./configure --prefix=$QP_ROOT && make -j 8 make install-exec-am EOF elif [[ ${PACKAGE} = irpf90 ]] ; then # When changing version of irpf90, don't forget to update etc/irpf90.rc download ${IRPF90_URL} "${QP_ROOT}"/external/irpf90.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file irpf90.tar.gz rm irpf90.tar.gz cd irpf90-* make EOF elif [[ ${PACKAGE} = zeromq ]] ; then download ${ZEROMQ_URL} "${QP_ROOT}"/external/zeromq.tar.gz execute << EOF export CC=gcc export CXX=g++ cd "\${QP_ROOT}"/external tar --gunzip --extract --file zeromq.tar.gz rm zeromq.tar.gz cd zeromq-* ./configure --prefix="\$QP_ROOT" --without-libsodium --enable-libunwind=no make make install EOF elif [[ ${PACKAGE} = f77zmq ]] ; then download ${F77ZMQ_URL} "${QP_ROOT}"/external/f77_zmq.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file f77_zmq.tar.gz rm f77_zmq.tar.gz cd f77_zmq-* export ZMQ_H="\$QP_ROOT"/include/zmq.h make cp libf77zmq.a "\${QP_ROOT}"/lib cp libf77zmq.so "\${QP_ROOT}"/lib cp f77_zmq_free.h "\${QP_ROOT}"/include EOF elif [[ ${PACKAGE} = ocaml || ${PACKAGE} = opam ]] ; then download ${OCAML_URL} "${QP_ROOT}"/external/opam_installer.sh if [[ -n ${TRAVIS} ]] ; then # Special commands for Travis CI chmod +x "${QP_ROOT}"/external/opam_installer.sh rm --force ${QP_ROOT}/bin/opam if [[ -n ${NO_CACHE} ]] ; then rm -rf ${HOME}/.opam fi export OPAMROOT=${HOME}/.opam cat << EOF | bash ${QP_ROOT}/external/opam_installer.sh --no-backup ${QP_ROOT}/bin EOF opam init --verbose --yes --compiler=4.07.1 --disable-sandboxing eval $(opam env) else # Conventional commands execute << EOF chmod +x "${QP_ROOT}"/external/opam_installer.sh "${QP_ROOT}"/external/opam_installer.sh --no-backup EOF execute << EOF rm --force ${QP_ROOT}/bin/opam export OPAMROOT=${OPAMROOT:-${QP_ROOT}/external/opam} echo ${QP_ROOT}/bin \ | sh ${QP_ROOT}/external/opam_installer.sh EOF rm ${QP_ROOT}/external/opam_installer.sh opam init --verbose --yes --compiler=4.07.1 --disable-sandboxing eval $(opam env) EOF fi elif [[ ${PACKAGE} = ocaml || ${PACKAGE} = opam_packages ]] ; then execute << EOF opam install -y \${OCAML_PACKAGES} || exit 1 EOF elif [[ ${PACKAGE} = bse ]] ; then download ${BSE_URL} "${QP_ROOT}"/external/bse.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file bse.tar.gz pip install -e basis_set_exchange-* EOF elif [[ ${PACKAGE} = zlib ]] ; then download ${ZLIB_URL} "${QP_ROOT}"/external/zlib.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file zlib.tar.gz rm zlib.tar.gz && \ cd zlib-*/ ./configure --prefix=${QP_ROOT} && \ make && make install EOF elif [[ ${PACKAGE} = docopt ]] ; then download ${DOCOPT_URL} "${QP_ROOT}"/external/docopt.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file docopt.tar.gz mv docopt-*/docopt.py "\${QP_ROOT}/external/Python" rm --recursive --force -- docopt-*/ docopt.tar.gz EOF elif [[ ${PACKAGE} = resultsFile ]] ; then download ${RESULTS_URL} "${QP_ROOT}"/external/resultsFile.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar --gunzip --extract --file resultsFile.tar.gz mv resultsFile-*/resultsFile "\${QP_ROOT}/external/Python/" rm --recursive --force resultsFile-* resultsFile.tar.gz EOF elif [[ ${PACKAGE} = bats ]] ; then download ${BATS_URL} "${QP_ROOT}"/external/bats.tar.gz execute << EOF cd "\${QP_ROOT}"/external tar -zxf bats.tar.gz ( cd bats-core-1.1.0/ ; ./install.sh \${QP_ROOT}) rm --recursive --force -- bats-core-1.1.0 \ "\${QP_ROOT}"/external/bats.tar.gz EOF fi done source quantum_package.rc NINJA=$(find_exe ninja) if [[ ${NINJA} = $(not_found) ]] ; then error "Ninja (ninja) is not installed." fail fi IRPF90=$(find_exe irpf90) if [[ ${IRPF90} = $(not_found) ]] ; then error "IRPf90 (irpf90) is not installed." fail fi ZEROMQ=$(find_lib -lzmq) if [[ ${ZEROMQ} = $(not_found) ]] ; then error "ZeroMQ (zeromq) is not installed." fail fi F77ZMQ=$(find_lib -lzmq -lf77zmq -lpthread) if [[ ${F77ZMQ} = $(not_found) ]] ; then error "Fortran binding of ZeroMQ (f77zmq) is not installed." fail fi GMP=$(find_lib -lgmp) if [[ ${ZLIB} = $(not_found) ]] ; then error "GMP (gmp) is not installed." fail fi LIBCAP=$(find_lib -lcap) if [[ ${LIBCAP} = $(not_found) ]] ; then error "Libcap (libcap) is not installed." fail fi BWRAP=$(find_exe bwrap) if [[ ${BWRAP} = $(not_found) ]] ; then error "Bubblewrap (bwrap) is not installed." fail fi OPAM=$(find_exe opam) if [[ ${OPAM} = $(not_found) ]] ; then error "OPAM (ocaml) package manager is not installed." fail fi OCAML=$(find_exe ocaml) if [[ ${OCAML} = $(not_found) ]] ; then error "OCaml (ocaml) compiler is not installed." fail fi ZLIB=$(find_lib -lz) if [[ ${ZLIB} = $(not_found) ]] ; then error "Zlib (zlib) is not installed." fail fi DOCOPT=$(find_python_lib docopt) if [[ ${DOCOPT} = $(not_found) ]] ; then error "docopt (docopt) is not installed." fail fi RESULTSFILE=$(find_python_lib resultsFile) if [[ ${RESULTSFILE} = $(not_found) ]] ; then error "resultsFile (resultsFile) is not installed." fail fi printf "\e[0;34m" echo " ___________________________ " echo "< All dependencies installed. >" echo " --------------------------- " echo " \ ^__^ " echo " \ (oo)\_______ " echo " (__)\ )\/\. " echo " ||----w | " echo " || || " echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" echo "" echo "If you have PIP, you can install the Basis Sex Exchange command-line tool:" echo "" echo " ./configure -i bse" echo "" echo "This will enable the usage of qp_basis to install extra basis sets." echo "" echo "" printf "\e[m\n" if [[ -n $CONFIG ]] ; then "${QP_ROOT}"/scripts/compilation/qp_create_ninja create --development "${CONFIG}" fi if [[ -f ${QP_ROOT}/build.ninja ]] ; then [[ -z ${TRAVIS} ]] && echo "You can now run ./bin/qpsh to enter in the QP shell mode :)" else echo "" echo "${QP_ROOT}/build.ninja does not exist," echo "you need to specify the COMPILATION configuration file." echo "See ./configure --help for more details." echo "" fi exit 0