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qmcchem/ocaml/Input.ml

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OCaml
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open Qptypes
open Qputils
module Pseudo: sig
type t = bool
val doc : string
val read : unit -> t
val to_bool : t -> bool
val of_bool : bool -> t
val to_int : t -> int
val of_int : int -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = bool
let doc = "Compute pseudo-potentials"
let of_bool x = x
let to_bool x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_pseudo_do_pseudo ())) then
Ezfio.set_pseudo_do_pseudo false;
Ezfio.get_pseudo_do_pseudo ()
|> of_bool
let to_string t =
to_bool t
|> string_of_bool
let of_string t =
try
String.lowercase_ascii t
|> bool_of_string
|> of_bool
with
| Invalid_argument msg -> failwith msg
let to_int t =
let t =
to_bool t
in
if t then 1
else 0
let of_int = function
| 0 -> false
| 1 -> true
| _ -> failwith "Expected 0 or 1"
end
module Fitcusp_factor : sig
type t = float
val doc : string
val read : unit -> t
val write : t -> unit
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = float
let doc = "Correct wave function to verify electron-nucleus cusp condition.
Fit is done for r < r_c(f) where r_c(f) = (1s orbital radius) x f. Value of f"
let of_float x =
if (x < 0.) then
failwith "Fitcusp_factor should be >= 0.";
if (x > 10.) then
failwith "Fitcusp_factor is too large.";
x
let to_float x = x
let read () =
ignore @@
Lazy.force Qputils.ezfio_filename ;
if (not (Ezfio.has_simulation_nucl_fitcusp_factor ())) then
begin
let factor =
Lazy.force Default.simulation_nucl_fitcusp_factor ;
in
Ezfio.set_simulation_nucl_fitcusp_factor factor
end ;
Ezfio.get_simulation_nucl_fitcusp_factor ()
|> of_float
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_float t
|> Ezfio.set_simulation_nucl_fitcusp_factor
let to_string t =
to_float t
|> string_of_float
let of_string t =
try
float_of_string t
|> of_float
with
| Invalid_argument msg -> failwith msg
end
module Block_time : sig
type t = int
val doc : string
val read : unit -> t
val write : t -> unit
val to_int : t -> int
val of_int : int -> t
val to_string : t -> string
val of_string : string -> t
val to_float : t -> float
val of_float : float-> t
end = struct
type t = int
let doc = "Time (seconds) of a block"
let of_int x =
if (x < 1) then
failwith "Block time should be >=1";
if (x > 36000) then
failwith "Block time is too large (<= 36000)";
x
let to_int x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_block_time ())) then
Lazy.force Default.simulation_block_time
|> Ezfio.set_simulation_block_time ;
Ezfio.get_simulation_block_time ()
|> of_int
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_int t
|> Ezfio.set_simulation_block_time
let to_string t =
to_int t
|> string_of_int
let of_string t =
int_of_string t
|> of_int
let to_float t =
to_int t
|> float_of_int
let of_float t =
int_of_float t
|> of_int
end
module Walk_num : sig
type t = int
val doc : string
val read : unit -> t
val write : t -> unit
val to_int : t -> int
val of_int : int -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = int
let doc = "Number of walkers per CPU core"
let of_int x =
if (x < 1) then
failwith "Number of walkers should be >=1";
if (x > 100_000) then
failwith "Number of walkers is too large (<= 100_000)";
x
let to_int x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_electrons_elec_walk_num () )) then
Lazy.force Default.electrons_elec_walk_num
|> Ezfio.set_electrons_elec_walk_num ;
Ezfio.get_electrons_elec_walk_num ()
|> of_int
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_int t
|> Ezfio.set_electrons_elec_walk_num
let to_string t =
to_int t
|> string_of_int
let of_string t =
int_of_string t
|> of_int
end
module Walk_num_tot : sig
type t = int
val doc : string
val read : unit -> t
val write : t -> unit
val to_int : t -> int
val of_int : int -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = int
let doc = "Total number of stored walkers for restart"
let of_int x =
if (x < 2) then
failwith "Total number of stored walkers should be > 1";
if (x > 100_000_000) then
failwith "Number of walkers to store too large (<= 100.10^6)";
x
let to_int x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_electrons_elec_walk_num_tot () )) then
Lazy.force Default.electrons_elec_walk_num_tot
|> Ezfio.set_electrons_elec_walk_num_tot ;
Ezfio.get_electrons_elec_walk_num_tot ()
|> of_int
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_int t
|> Ezfio.set_electrons_elec_walk_num_tot
let to_string t =
to_int t
|> string_of_int
let of_string t =
int_of_string t
|> of_int
end
module Stop_time : sig
type t = int
val read : unit -> t
val doc : string
val write : t -> unit
val to_int : t -> int
val of_int : int -> t
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = int
let doc = "Requested simulation time (seconds)"
let of_int x =
if (x < 1) then
failwith "Simulation time too short (>=1 s)";
x
let to_int x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_stop_time ())) then
Lazy.force Default.simulation_stop_time
|> Ezfio.set_simulation_stop_time ;
Ezfio.get_simulation_stop_time ()
|> of_int
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_int t
|> Ezfio.set_simulation_stop_time
let to_string t =
to_int t
|> string_of_int
let of_string t =
int_of_string t
|> of_int
let to_float t =
to_int t
|> float_of_int
let of_float t =
int_of_float t
|> of_int
end
module Method : sig
type t = VMC | DMC | SRMC | FKMC | PDMC
val doc : string
val read : unit -> t
val write : t -> unit
val to_string : t -> string
val of_string : string -> t
end = struct
type t = VMC | DMC | SRMC | FKMC | PDMC
let doc = "QMC Method : [ VMC | DMC | SRMC | FKMC | PDMC ]"
let of_string = function
| "VMC" | "vmc" -> VMC
| "DMC" | "dmc" -> DMC
| "SRMC" | "srmc" -> SRMC
| "PDMC" | "pdmc" -> PDMC
| "FKMC" | "fkmc" -> FKMC
| x -> failwith ("Method should be [ VMC | DMC | SRMC | FKMC | PDMC ], not "^x^".")
let to_string = function
| VMC -> "VMC"
| DMC -> "DMC"
| SRMC -> "SRMC"
| PDMC -> "PDMC"
| FKMC -> "FKMC"
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_method ())) then
Lazy.force Default.simulation_method
|> Ezfio.set_simulation_method ;
Ezfio.get_simulation_method ()
|> of_string
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_string t
|> Ezfio.set_simulation_method
end
module Sampling : sig
type t = Brownian | Langevin
val doc : string
val read : unit -> t
val write : t -> unit
val to_string : t -> string
val of_string : string -> t
end = struct
type t = Brownian | Langevin
let doc = "Sampling algorithm : [ Langevin | Brownian ]"
let of_string s =
match String.capitalize_ascii (String.trim s) with
| "Langevin" -> Langevin
| "Brownian" -> Brownian
| x -> failwith ("Sampling should be [ Brownian | Langevin ], not "^x^".")
let to_string = function
| Langevin -> "Langevin"
| Brownian -> "Brownian"
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_sampling ())) then
Lazy.force Default.simulation_sampling
|> Ezfio.set_simulation_sampling ;
Ezfio.get_simulation_sampling ()
|> of_string
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_string t
|> Ezfio.set_simulation_sampling
end
module Trial_wf_energy : sig
type t = float
val doc : string
val read : unit -> t
val write : t -> unit
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = float
let doc = "Energy of the trial wave function (au)"
let of_float x =
if (x > 0.) then
failwith "Reference energy should not be positive.";
if (x <= -1_000_000.) then
failwith "Reference energy is too low.";
x
let to_float x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_e_trial ())) then
to_float 0.
|> Ezfio.set_simulation_e_trial;
Ezfio.get_simulation_e_trial ()
|> of_float
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_float t
|> Ezfio.set_simulation_e_trial
let of_string x =
float_of_string x
|> of_float
let to_string x =
to_float x
|> string_of_float
end
module Ref_energy : sig
type t = float
val doc : string
val read : unit -> t
val write : t -> unit
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = float
let doc = "Fixed reference energy to normalize DMC weights (au)"
let of_float x =
if (x > 0.) then
failwith "Reference energy should not be positive.";
if (x <= -1_000_000.) then
failwith "Reference energy is too low.";
x
let to_float x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_e_ref ())) then
to_float 0.
|> Ezfio.set_simulation_e_ref;
Ezfio.get_simulation_e_ref ()
|> of_float
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_float t
|> Ezfio.set_simulation_e_ref
let of_string x =
float_of_string x
|> of_float
let to_string x =
to_float x
|> string_of_float
end
module CI_threshold : sig
type t = float
val doc : string
val read : unit -> t
val write : t -> unit
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = float
let doc = "Truncation t of the wave function : Remove determinants with a
contribution to the norm less than t (au)"
let of_float x =
if (x >= 1.) then
failwith "Truncation of the wave function should be < 1.";
if (x < 0.) then
failwith "Truncation of the wave function should be positive.";
x
let to_float x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_ci_threshold ())) then
Lazy.force Default.simulation_ci_threshold
|> Ezfio.set_simulation_ci_threshold ;
Ezfio.get_simulation_ci_threshold ()
|> of_float
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_float t
|> Ezfio.set_simulation_ci_threshold
let of_string x =
float_of_string x
|> of_float
let to_string x =
to_float x
|> string_of_float
end
module SRMC_projection_time : sig
type t = float
val doc : string
val read : unit -> t
val write : t -> unit
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = float
let doc = "SRMC projection time (au)"
let of_float x =
if (x >= 100.) then
failwith "SRMC Projection time should be < 100.";
if (x <= 0.) then
failwith "SRMC Projection time should be positive.";
x
let to_float x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_srmc_projection_time())) then
Lazy.force Default.simulation_srmc_projection_time
|> Ezfio.set_simulation_srmc_projection_time ;
Ezfio.get_simulation_srmc_projection_time ()
|> of_float
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_float t
|> Ezfio.set_simulation_srmc_projection_time
let of_string x =
float_of_string x
|> of_float
let to_string x =
to_float x
|> string_of_float
end
module Time_step : sig
type t = float
val doc : string
val read : unit -> t
val write : t -> unit
val to_float : t -> float
val of_float : float -> t
val to_string : t -> string
val of_string : string -> t
end = struct
type t = float
let doc = "Simulation time step (au)"
let of_float x =
if (x >= 10.) then
failwith "Time step should be < 10.";
if (x <= 0.) then
failwith "Time step should be positive.";
x
let to_float x = x
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_simulation_time_step ())) then
Lazy.force Default.simulation_time_step
|> Ezfio.set_simulation_time_step ;
Ezfio.get_simulation_time_step ()
|> of_float
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_float t
|> Ezfio.set_simulation_time_step
let of_string x =
float_of_string x
|> of_float
let to_string x =
to_float x
|> string_of_float
end
module Jastrow_type : sig
type t = None | Core | Simple | Mu
val doc : string
val read : unit -> t
val write : t -> unit
val to_string : t -> string
val of_string : string -> t
end = struct
type t = None | Core | Simple | Mu
let doc = "Type of Jastrow factor [ None | Core | Simple | Mu ]"
let of_string s =
match String.capitalize_ascii (String.trim s) with
| "Core" -> Core
| "Simple" -> Simple
| "None" -> None
| "Mu" -> Mu
| _ -> failwith "Jastrow type should be [ None | Core | Simple | Mu ]"
let to_string = function
| Core -> "Core"
| Simple -> "Simple"
| Mu -> "Mu"
| None -> "None"
let read () =
let _ =
Lazy.force Qputils.ezfio_filename
in
if (not (Ezfio.has_jastrow_jast_type ())) then
Lazy.force Default.jastrow_jast_type
|> Ezfio.set_jastrow_jast_type ;
Ezfio.get_jastrow_jast_type ();
|> of_string
let write t =
let _ =
Lazy.force Qputils.ezfio_filename
in
to_string t
|> Ezfio.set_jastrow_jast_type
end
module Properties: sig
type t = (Property.t * bool) list
val doc : string
val read : unit -> t
val write : t -> unit
val to_string : t -> string
val of_string : string -> t
end = struct
type t = (Property.t * bool) list
let doc =
"Properties to sample. (X) is true and ( ) is false"
let read () =
List.rev_map (fun x -> (x, Property.calc x)) Property.all
|> List.rev
let write l =
List.iter (fun (x,b) -> Property.set_calc x b) l
let to_string l =
List.rev_map (fun (x,b) ->
let ch =
if b then "X" else " "
in
Printf.sprintf "(%s) %s" ch (Property.to_string x)) l
|> List.rev
|> String.concat "\n"
let of_string s =
String.split_on_char '\n' s
|> List.rev_map (fun x ->
let (calc,prop) =
String.trim x
|> String_ext.rsplit2_exn ~on:' '
in
let prop =
String.trim prop
|> Property.of_string
and calc =
match calc with
| "(X)" -> true
| "( )" -> false
| _ -> failwith " (X) or ( ) expected"
in
(prop, calc)
)
|> List.rev
end
(** Check if everything is correct in the input file. *)
let validate () =
let _ =
Lazy.force Qputils.ezfio_filename
in
(* Check if walkers are present *)
if (not (Ezfio.has_electrons_elec_coord_pool ())) then
Printf.printf "Warning: No initial walkers\n";
let meth =
Method.read ()
and sampling =
Sampling.read ()
and ts =
Time_step.read ()
and do_pseudo =
Pseudo.read ()
in
(* Check sampling and time steps *)
let () =
match (sampling, meth, Pseudo.to_bool do_pseudo) with
| (Sampling.Brownian, Method.VMC, _) ->
if ( (Time_step.to_float ts) >= 10. ) then
warn "Time step seems large for VMC."
| (Sampling.Langevin, Method.VMC, _) ->
if ( (Time_step.to_float ts) <= 0.01 ) then
warn "Time step seems small for Langevin sampling."
| (Sampling.Brownian, _, true) ->
if ( (Time_step.to_float ts) >= 0.5 ) then
warn ( "Time step seems large for "^(Method.to_string meth) )
| (Sampling.Brownian, _, false) ->
if ( (Time_step.to_float ts) >= 0.01 ) then
warn ( "Time step seems large for "^(Method.to_string meth) )
| (Sampling.Langevin, _, _) ->
failwith "Lanvegin sampling is incompatible with DMC"
in
(* Check E_ref is not zero *)
let () =
match (meth, Ref_energy.(read () |> to_float) ) with
| (Method.SRMC,0.)
| (Method.PDMC,0.)
| (Method.FKMC,0.)
| (Method.DMC,0.) -> failwith ("E_ref should not be zero in "^(Method.to_string meth) )
| _ -> ()
in
(* Set block and total time*)
let () =
if ( (Block_time.read ()) > Stop_time.read ()) then
failwith "Block time is longer than total time"
in
(* Check if E_loc if computed *)
let () =
match (meth, Property.(calc E_loc)) with
| (Method.SRMC, false)
| (Method.PDMC, false)
| (Method.FKMC, false)
| (Method.DMC, false) -> failwith ( "E_loc should be sampled in "^(Method.to_string meth) )
| (Method.VMC, false) -> warn "Sampling of E_loc is not activated in input"
| _ -> ()
in
(* Fitcusp is incompatible with pseudo *)
let () =
let f =
Fitcusp_factor.read ()
|> Fitcusp_factor.to_float
in
match (Pseudo.to_bool do_pseudo, f > 0.) with
| (true, true) ->
begin
warn "Electron-nucleus cusp fitting is incompatible with Pseudopotentials.";
Fitcusp_factor.of_float 0.
|> Fitcusp_factor.write
end
| _ -> ()
in
(* Other Checks *)
let () =
let _ =
Walk_num.read ()
and _ =
Walk_num_tot.read ()
and _ =
CI_threshold.read ()
in ()
in
()
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