mirror of
https://github.com/triqs/dft_tools
synced 2024-12-25 13:53:40 +01:00
165 lines
4.5 KiB
Python
165 lines
4.5 KiB
Python
|
|
import os
|
|
import errno
|
|
import signal
|
|
import sys
|
|
import time
|
|
import pytriqs.utility.mpi as mpi
|
|
import converters.plovasp.main as plovasp
|
|
from test_ham_hf import dmft_cycle
|
|
|
|
debug = True
|
|
#
|
|
# Helper functions
|
|
#
|
|
def sigint_handler(signal, frame):
|
|
raise SystemExit(1)
|
|
|
|
def is_vasp_lock_present():
|
|
return os.path.isfile('./vasp.lock')
|
|
|
|
def is_vasp_running(vasp_pid):
|
|
"""
|
|
Tests if VASP initial process is still alive.
|
|
"""
|
|
pid_exists = False
|
|
if mpi.is_master_node():
|
|
try:
|
|
os.kill(vasp_pid, 0)
|
|
except OSError, e:
|
|
pid_exists = e.errno == errno.EPERM
|
|
else:
|
|
pid_exists = True
|
|
|
|
pid_exists = mpi.bcast(pid_exists)
|
|
return pid_exists
|
|
|
|
def get_dft_energy():
|
|
"""
|
|
Reads energy from the last line of OSZICAR.
|
|
"""
|
|
with open('OSZICAR', 'r') as f:
|
|
nextline = f.readline()
|
|
while nextline.strip():
|
|
line = nextline
|
|
nextline = f.readline()
|
|
# print "OSZICAR: ", line[:-1]
|
|
|
|
try:
|
|
dft_energy = float(line.split()[2])
|
|
except ValueError:
|
|
print "Cannot read energy from OSZICAR, setting it to zero"
|
|
dft_energy = 0.0
|
|
|
|
return dft_energy
|
|
|
|
class bcolors:
|
|
MAGENTA = '\033[95m'
|
|
BLUE = '\033[94m'
|
|
GREEN = '\033[92m'
|
|
YELLOW = '\033[93m'
|
|
RED = '\033[91m'
|
|
ENDC = '\033[0m'
|
|
#
|
|
# Main self-consistent cycle
|
|
#
|
|
def run_all(vasp_pid):
|
|
"""
|
|
"""
|
|
mpi.report(" Waiting for VASP lock to appear...")
|
|
while not is_vasp_lock_present():
|
|
time.sleep(1)
|
|
|
|
vasp_running = True
|
|
|
|
while vasp_running:
|
|
if debug: print bcolors.RED + "rank %s"%(mpi.rank) + bcolors.ENDC
|
|
mpi.report(" Waiting for VASP lock to disappear...")
|
|
mpi.barrier()
|
|
while is_vasp_lock_present():
|
|
time.sleep(1)
|
|
# if debug: print bcolors.YELLOW + " waiting: rank %s"%(mpi.rank) + bcolors.ENDC
|
|
if not is_vasp_running(vasp_pid):
|
|
mpi.report(" VASP stopped")
|
|
vasp_running = False
|
|
break
|
|
|
|
if debug: print bcolors.MAGENTA + "rank %s"%(mpi.rank) + bcolors.ENDC
|
|
err = 0
|
|
exc = None
|
|
try:
|
|
if debug: print bcolors.BLUE + "plovasp: rank %s"%(mpi.rank) + bcolors.ENDC
|
|
if mpi.is_master_node():
|
|
plovasp.generate_and_output_as_text('plo.cfg', vasp_dir='./')
|
|
# Read energy from OSZICAR
|
|
dft_energy = get_dft_energy()
|
|
except Exception, exc:
|
|
err = 1
|
|
|
|
err = mpi.bcast(err)
|
|
if err:
|
|
if mpi.is_master_node():
|
|
raise exc
|
|
else:
|
|
raise SystemExit(1)
|
|
|
|
mpi.barrier()
|
|
|
|
try:
|
|
if debug: print bcolors.GREEN + "rank %s"%(mpi.rank) + bcolors.ENDC
|
|
corr_energy, dft_dc = dmft_cycle()
|
|
except:
|
|
if mpi.is_master_node():
|
|
print " master forwarding the exception..."
|
|
raise
|
|
else:
|
|
print " rank %i exiting..."%(mpi.rank)
|
|
raise SystemExit(1)
|
|
mpi.barrier()
|
|
|
|
if mpi.is_master_node():
|
|
total_energy = dft_energy + corr_energy - dft_dc
|
|
print
|
|
print "="*80
|
|
print " Total energy: ", total_energy
|
|
print " DFT energy: ", dft_energy
|
|
print " Corr. energy: ", corr_energy
|
|
print " DFT DC: ", dft_dc
|
|
print "="*80
|
|
print
|
|
|
|
if mpi.is_master_node() and vasp_running:
|
|
open('./vasp.lock', 'a').close()
|
|
|
|
if mpi.is_master_node():
|
|
total_energy = dft_energy + corr_energy - dft_dc
|
|
with open('TOTENERGY', 'w') as f:
|
|
f.write(" Total energy: %s\n"%(total_energy))
|
|
f.write(" DFT energy: %s\n"%(dft_energy))
|
|
f.write(" Corr. energy: %s\n"%(corr_energy))
|
|
f.write(" DFT DC: %s\n"%(dft_dc))
|
|
f.write(" Energy correction: %s\n"%(corr_energy - dft_dc))
|
|
|
|
mpi.report("***Done")
|
|
|
|
|
|
if __name__ == '__main__':
|
|
try:
|
|
vasp_pid = int(sys.argv[1])
|
|
except (ValueError, KeyError):
|
|
if mpi.is_master_node():
|
|
print "VASP process pid must be provided as the first argument"
|
|
raise
|
|
# if len(sys.argv) > 1:
|
|
# vasp_path = sys.argv[1]
|
|
# else:
|
|
# try:
|
|
# vasp_path = os.environ['VASP_DIR']
|
|
# except KeyError:
|
|
# if mpi.is_master_node():
|
|
# print "Path to VASP must be specified either as an argument of in VASP_DIR"
|
|
# raise
|
|
signal.signal(signal.SIGINT, sigint_handler)
|
|
|
|
run_all(vasp_pid)
|