################################################################################ # # TRIQS: a Toolbox for Research in Interacting Quantum Systems # # Copyright (C) 2011 by M. Ferrero, O. Parcollet # # DFT tools: Copyright (C) 2011 by M. Aichhorn, L. Pourovskii, V. Vildosola # # PLOVasp: Copyright (C) 2015 by O. E. Peil # # TRIQS is free software: you can redistribute it and/or modify it under the # terms of the GNU General Public License as published by the Free Software # Foundation, either version 3 of the License, or (at your option) any later # version. # # TRIQS is distributed in the hope that it will be useful, but WITHOUT ANY # WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS # FOR A PARTICULAR PURPOSE. See the GNU General Public License for more # details. # # You should have received a copy of the GNU General Public License along with # TRIQS. If not, see . # ################################################################################ import errno import os import re import time import signal import sys import triqs.utility.mpi as mpi from . import converter from shutil import copyfile xch = sys.excepthook def excepthook(typ, value, traceback): xch(typ, value, traceback) if mpi.MPI.COMM_WORLD.size > 1: mpi.MPI.COMM_WORLD.Abort(1) sys.excepthook = excepthook debug = False # # Helper functions # def sigint_handler(signal, frame): raise SystemExit(1) def is_vasp_lock_present(): res_bool = False if mpi.is_master_node(): res_bool = os.path.isfile('./vasp.lock') res_bool = mpi.bcast(res_bool) return res_bool def is_vasp_running(vasp_pid): """ Tests if VASP initial process is still alive. """ pid_exists = False if mpi.is_master_node(): try: os.kill(vasp_pid, 0) except OSError as e: pid_exists = e.errno == errno.EPERM else: pid_exists = True pid_exists = mpi.bcast(pid_exists) return pid_exists def get_dft_energy(): """ Reads energy from the last line of OSZICAR. """ with open('OSZICAR', 'r') as f: nextline = f.readline() while nextline.strip(): line = nextline nextline = f.readline() # print "OSZICAR: ", line[:-1] try: dft_energy = float(line.split()[2]) except ValueError: print("Cannot read energy from OSZICAR, setting it to zero") dft_energy = 0.0 return dft_energy class bcolors: MAGENTA = '\033[95m' BLUE = '\033[94m' GREEN = '\033[92m' YELLOW = '\033[93m' RED = '\033[91m' ENDC = '\033[0m' # # Main self-consistent cycle # def run_all(vasp_pid, dmft_cycle, cfg_file, n_iter, n_iter_dft, vasp_version): """ """ mpi.report(" Waiting for VASP lock to appear...") while not is_vasp_lock_present(): time.sleep(1) vasp_running = True iter = 0 while vasp_running: if debug: print(bcolors.RED + "rank %s"%(mpi.rank) + bcolors.ENDC) mpi.report(" Waiting for VASP lock to disappear...") mpi.barrier() while is_vasp_lock_present(): time.sleep(1) # if debug: print bcolors.YELLOW + " waiting: rank %s"%(mpi.rank) + bcolors.ENDC if not is_vasp_running(vasp_pid): mpi.report(" VASP stopped") vasp_running = False break # Tell VASP to stop if the maximum number of iterations is reached if debug: print(bcolors.MAGENTA + "rank %s"%(mpi.rank) + bcolors.ENDC) err = 0 exc = None if debug: print(bcolors.BLUE + "plovasp: rank %s"%(mpi.rank) + bcolors.ENDC) if mpi.is_master_node(): converter.generate_and_output_as_text(cfg_file, vasp_dir='./') # Read energy from OSZICAR dft_energy = get_dft_energy() mpi.barrier() if debug: print(bcolors.GREEN + "rank %s"%(mpi.rank) + bcolors.ENDC) corr_energy, dft_dc = dmft_cycle() mpi.barrier() if mpi.is_master_node(): total_energy = dft_energy + corr_energy - dft_dc print() print("="*80) print(" Total energy: ", total_energy) print(" DFT energy: ", dft_energy) print(" Corr. energy: ", corr_energy) print(" DFT DC: ", dft_dc) print("="*80) print() # check if we should do additional VASP calculations # in the standard VASP version, VASP writes out GAMMA itself # so that if we want to keep GAMMA fixed we have to copy it to # GAMMA_recent and copy it back after VASP has completed an iteration # if we are using a hacked Version of VASP where the write out is # disabled we can skip this step. # the hack consists of removing the call of LPRJ_LDApU in VASP src file # electron.F around line 644 iter_dft = 0 if vasp_version == 'standard': copyfile(src='GAMMA',dst='GAMMA_recent') while iter_dft < n_iter_dft: if mpi.is_master_node(): open('./vasp.lock', 'a').close() while is_vasp_lock_present(): time.sleep(1) if not is_vasp_running(vasp_pid): mpi.report(" VASP stopped") vasp_running = False break iter_dft += 1 if vasp_version == 'standard': copyfile(src='GAMMA_recent',dst='GAMMA') iter += 1 if iter == n_iter: print("\n Maximum number of iterations reached.") print(" Aborting VASP iterations...\n") f_stop = open('STOPCAR', 'wt') f_stop.write("LABORT = .TRUE.\n") f_stop.close() if mpi.is_master_node(): total_energy = dft_energy + corr_energy - dft_dc with open('TOTENERGY', 'w') as f: f.write(" Total energy: %s\n"%(total_energy)) f.write(" DFT energy: %s\n"%(dft_energy)) f.write(" Corr. energy: %s\n"%(corr_energy)) f.write(" DFT DC: %s\n"%(dft_dc)) f.write(" Energy correction: %s\n"%(corr_energy - dft_dc)) mpi.report("***Done") def main(): import importlib try: vasp_pid = int(sys.argv[1]) except (ValueError, KeyError): if mpi.is_master_node(): print("ERROR: VASP process pid must be provided as the first argument") raise try: n_iter = int(sys.argv[2]) except (ValueError, KeyError): if mpi.is_master_node(): print("ERROR: Number of iterations must be provided as the second argument") raise try: n_iter_dft = int(sys.argv[3]) except (ValueError, KeyError): if mpi.is_master_node(): print("ERROR: Number of VASP iterations with fixed charge density must be provided as the third argument") raise try: dmft_script = re.sub("\.py$", "", sys.argv[4]) except: if mpi.is_master_node(): print("ERROR: User-defined DMFT script must be provided as the fourth argument") raise # Optional parameter: config-file name try: cfg_file = sys.argv[5] except KeyError: cfg_file = 'plo.cfg' try: vasp_version = sys.argv[6] except KeyError: vasp_version = 'standard' if vasp_version != 'standard' and vasp_version != 'no_gamma_write': raise Exception('vasp_version has to be standard or no_gamma_write') # if len(sys.argv) > 1: # vasp_path = sys.argv[1] # else: # try: # vasp_path = os.environ['VASP_DIR'] # except KeyError: # if mpi.is_master_node(): # print "Path to VASP must be specified either as an argument of in VASP_DIR" # raise signal.signal(signal.SIGINT, sigint_handler) dmft_mod = importlib.import_module(dmft_script) run_all(vasp_pid, dmft_mod.dmft_cycle, cfg_file, n_iter, n_iter_dft, vasp_version) if __name__ == '__main__': main()