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Commit Graph

486 Commits

Author SHA1 Message Date
Olivier Parcollet
eeba763171 Fix #101 operator: add python wrapper for is_zero
- added is_zero in python
- reorder a bit (module defined first), but that is cosmetics
2014-07-03 19:23:32 +02:00
Michel Ferrero
58659415ad Update tests related to Fourier transforms 2014-07-02 22:56:06 +02:00
Michel Ferrero
cbfecdf623 Fix make_mesh_fourier_compatible to correct size
The number of points in imaginary time must be at least twice
as big as the number of pionts in matsubara frequencies.
2014-07-02 22:56:06 +02:00
Olivier Parcollet
fcfcce8d61 Cmake. Fix #97 and #89
- C++14 mode not automatic. Was based on compiler version,
  but the version of the C++ lib also matters....
  Now, there is an explicit USE_CPP14 option [default =OFF]
  to set to compile in c++1y mode.
  Solve also #89, i.e. the flags is now in TRIQS_CXX_DEFINITIONS and
  therefore pass to applications (including ipython magic).

- Python_use_mpi4py is now ON by default.
  Rational : it has been used for a while by e.g. Thomas,
  and it is necessary on OS X (boost.mpi.python raises a lot of issues).
  Hence we put it as default.

- Rename the option Build_Triqs_General_Tools_Test to a simpler
  Build_Tests
2014-07-02 21:44:51 +02:00
Olivier Parcollet
9583afc671 Fix #98
- A silly copy paste error : the operator - for matrix expression was
  defined twice.
- second error : a typo in unary method.
2014-07-02 18:22:25 +02:00
Olivier Parcollet
3b2372c437 python wrapper. Pre/postcall can now be inlined
- Add the possibility to give a function "on the fly"
  for the precall and postcall of a python wrapped functoin.
- No change for previous code, it is a simple new feature.
- changed test accordingly. See my_module_desc.py for an example.
2014-07-02 16:48:15 +02:00
Michel Ferrero
7040e9f934 Fix wrong minus sign in FT definition
This is a copy of commit 3fcf727 that has been done on the master branch.
2014-07-01 18:08:15 +02:00
Michel Ferrero
88f8e4cce4 Fix bug with full bins in Fourier transforms
I also added a test to make sure the time mesh is twice as
long as the frequency mesh. Obviously now some tests don't
pass... I will fix them in the next commit.
2014-07-01 18:04:30 +02:00
Olivier Parcollet
76798cf6a2 wrap generator : minor correction
- setter was not working in general.
  name variable error.
2014-06-23 17:08:13 +02:00
Olivier Parcollet
c8be004055 gf : bug correction in make_block_gf
- See comment : a move + undefined order of args eval. of function
  error.
2014-06-23 16:13:27 +02:00
Olivier Parcollet
6bacb101bc Fix #93
- Forgot to test on gcc 4.8 ...
2014-06-23 13:58:47 +02:00
Olivier Parcollet
4af1afbdaf hdf5 : clean up
- For users : only change is :
   H5::H5File in apps. to be replaced by triqs::h5::file, same API.

- using only the C API because :
   - it is cleaner, better documented, more examples.
   - it is the native hdf5 interface.
   - simplify the installation e.g. on mac. Indeed, hdf5 is
     usually installed without C++ interface, which is optional.
     E.g. EPD et al., brew by default.
     Also the infamous mpi+ hdf5_cpp bug, for which we have no clean solution.

- clean the notion of parent of a group. Not needed, better iterate function in C LT API.
- modified doc : no need for C++ bindings any more.
- modified cmake to avoid requiring CPP bindings.
2014-06-22 13:57:47 +02:00
Olivier Parcollet
36a60ce529 tuple tools : simplify
- simplify implementation of several functions.
- clean API, rename, etc...
- add more documentation
2014-06-21 21:11:33 +02:00
Olivier Parcollet
6d12c4b7f6 Fix #92
- A silly error : forgot to resize when rereading indices...
2014-06-21 16:17:40 +02:00
Olivier Parcollet
c8eefe0ad6 Correction: remove a cerr print
- forgotten print
2014-06-21 14:11:43 +02:00
Olivier Parcollet
b3e2c337c3 Fix static missing in wrapper tools
- numpy import function should be static
- Fix bug in gcc 4.9
2014-06-15 18:14:06 +02:00
Olivier Parcollet
add3a075b7 test arrays. clean include
- clean include path.
  (pragma once issue on icc).
- clean icc debug macros
2014-06-15 18:14:06 +02:00
Olivier Parcollet
33b120948d gf: inverse for gf_view and gf
- correction
2014-06-13 17:58:05 +02:00
Olivier Parcollet
0727bddeee Fix #85 : narrowing conversion 2014-06-12 23:01:34 +02:00
Olivier Parcollet
8cf7465114 C14 : add sequence.
correct seq gcc code inclusion
2014-06-12 22:59:22 +02:00
Olivier Parcollet
6e987f4563 Correction of f273c09c6f
- a missing include...
2014-06-12 17:56:07 +02:00
Olivier Parcollet
25eec4e046 Silence some gcc warnings...
- Silence some trivial warning.
- TODO: narrowing in a few places.
2014-06-12 17:45:12 +02:00
Olivier Parcollet
f273c09c6f Make it compile again in pure C mode 2014-06-12 17:41:32 +02:00
Olivier Parcollet
842274003f Fix import array in extensions.
- import arrays in extensions (mako file).
- put import_arrays in converter,
  along the lines of our own objects (numpy and triqs uses
  the same capsule technique, i.e. the standard technique from python
  doc.)
2014-06-12 17:27:48 +02:00
Olivier Parcollet
cbf6092956 pytream : add pragma to remove warning
- usual char * in python
2014-06-12 13:18:26 +02:00
Olivier Parcollet
f1c32012a6 magic : redirect std::cout to python sys.out.write
- for all functions, except when GIL option (not implemented) is here
  we use a triqs::py_stream, which redirect the stream
  to python sys.write
- so that a simple C++ code with a std::cout
  print its output in the notebook...
- NB : it only works for the code within the cell.
  If it calls another function on the lib which uses cout,
  print is not redirected.
  Designed for simple tests....
- cerr not (yet) redirected. (useful ?).
2014-06-11 16:25:47 +02:00
Olivier Parcollet
aa126e178b update for xcode 5.1.1
- clang 3.4 on default Os X.
- automatically in C++14 mode.
- a little fix in clef (var >> ...) because of an apparent bug in auto
  detection in clang.
2014-06-11 16:23:48 +02:00
Olivier Parcollet
8f975234c6 doc: fix cmake for Ubuntu
- findpackage missing
2014-06-06 14:31:44 +02:00
Michel Ferrero
dd42025458 Add future test for operators in parameters 2014-06-06 11:12:33 +02:00
Michel Ferrero
a56f490492 Add python test for operators 2014-06-06 10:44:50 +02:00
Michel Ferrero
31d8120b64 Add missing file in installation of gf 2014-06-05 14:07:44 +02:00
Michel Ferrero
3eb9b16a57 Add number operator in operator class 2014-06-05 14:07:15 +02:00
Michel Ferrero
62c4b54e56 Add maps to py_converters 2014-06-04 01:11:45 +02:00
Michel Ferrero
dfa27554f5 Add map<string,T> to h5 2014-06-03 18:13:14 +02:00
Michel Ferrero
e891474544 Avoid that wrap_test gets installed 2014-06-03 17:24:08 +02:00
Michel Ferrero
89de284cc8 Add test for many_body_operators 2014-06-03 17:12:29 +02:00
Michel Ferrero
422cabd52e Fix detail in callbacks 2014-06-03 17:07:44 +02:00
Michel Ferrero
bf3833f803 Fix a bug in buffered function test 2014-06-03 15:24:52 +02:00
Michel Ferrero
6295d563ae Add absolute c_type in many_body_operator desc 2014-06-03 15:09:07 +02:00
Michel Ferrero
8c75aa6373 Small fix in wrap_generator 2014-06-03 15:08:24 +02:00
Michel Ferrero
fa06eaf3ae Fix for issue #82 2014-06-03 15:07:38 +02:00
Olivier Parcollet
d29be978e9 magic : correct for linux
- compiler path, etc...
2014-06-02 11:04:17 +02:00
Olivier Parcollet
28a12c7b2f ipython triqs magic v1
- first version of triqs magic for the notebook
- add add_preamble to the wrap_generator.
2014-06-01 21:00:07 +02:00
Olivier Parcollet
3fe400d34c doc : split c++ code from rst
- examples split from the rst file using a python script (split_code).
- Final result for the doc is unchanged.
- examples are compiled and tested with the other tests.
- examples' code have been clang-formatted, with triqs style.
- doc compiles much faster, and with the same options as the rest of the
  test.
- examples are added as tests, so they are run by make test, as simple C
  tests.
- done for the tutorials and the reference.
- autocompile removed (changed into triqs_example directive).
- add triqs_example :
   - make a literal include of the source code.
   - runs the compiled example
   - add, as before, the result to the source code in the doc.
- added the script split_code, used to make the changes automatically,
  maybe for later reuse. (in _tools)
2014-05-31 23:00:16 +02:00
Olivier Parcollet
4f51c1e043 Correction.
- forgot the doc file.
- minor correction for wrapping application
2014-05-31 18:51:50 +02:00
Olivier Parcollet
4e9460bc1c Wrapper : clean and document.
- clean the c_name.
- add more refined signature (with c_name optionally in it).
- add some autodoc.
- clean code : move class in nested, remove useless dict call, etc...
- operator2 : move unary - and unit in algebra in general wrapper.
- various name change to make private function start with _, for
  autodoc.
2014-05-31 16:10:07 +02:00
Olivier Parcollet
2abf36a2ff move wrap_test to test/pytriqs 2014-05-30 23:08:32 +02:00
Olivier Parcollet
3e0d53564a gf: triqs_auto_assign for gf_view
g[k][om] : missing an overload for views
2014-05-30 22:27:13 +02:00
Olivier Parcollet
446f817111 wrapper: add release_GIL_and_enable_signal option.
- Add to the wrapper generator (add_method) the release_GIL_and_enable_signal option which :

   - release the GIL
   - save the python signal handler
   - enable the C++ triqs signal handler instead.
   - undo all of this after the code runs, or in a case of exception.
   - used python include, ceval.h, line 72 comments and below.

- reworked the triqs::signal_handler.
  simple C like function, no object (no need).
  start, stop, received, cf header file.

- clean the call_back.cpp : only place using the signal directly
  (qmc uses the callback).
  in particular, remove the old BOOST CHRONO, since
  the std::chrono works fine on platforms we use now.
2014-05-30 21:09:18 +02:00
Olivier Parcollet
243d4a798b wrapper: add use_module
- a module can use the converters used by another
  with the use_module('A') command.
  In which case :
    - the generate converter header for A will be included.
    - the header, at the top, now contains a simple list of all
      wrapped types, which is then included in the wrapped_types
      of the module for proper code generation.
- simplify the code generation : just generate_code.
- all arguments are analyzed from sys.argv at the import of the
  wrap_generator module. In any case, the xx_desc.py will be called from the corresponding
  cmake command, hence with the right arguments.
- Added a dependencies in my_module_B of wrap_test to show how to make
  the dependencies in the cmake file, if needed.
2014-05-30 19:34:13 +02:00