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Commit Graph

59 Commits

Author SHA1 Message Date
Olivier Parcollet
4af1afbdaf hdf5 : clean up
- For users : only change is :
   H5::H5File in apps. to be replaced by triqs::h5::file, same API.

- using only the C API because :
   - it is cleaner, better documented, more examples.
   - it is the native hdf5 interface.
   - simplify the installation e.g. on mac. Indeed, hdf5 is
     usually installed without C++ interface, which is optional.
     E.g. EPD et al., brew by default.
     Also the infamous mpi+ hdf5_cpp bug, for which we have no clean solution.

- clean the notion of parent of a group. Not needed, better iterate function in C LT API.
- modified doc : no need for C++ bindings any more.
- modified cmake to avoid requiring CPP bindings.
2014-06-22 13:57:47 +02:00
Olivier Parcollet
36a60ce529 tuple tools : simplify
- simplify implementation of several functions.
- clean API, rename, etc...
- add more documentation
2014-06-21 21:11:33 +02:00
Olivier Parcollet
add3a075b7 test arrays. clean include
- clean include path.
  (pragma once issue on icc).
- clean icc debug macros
2014-06-15 18:14:06 +02:00
Olivier Parcollet
8cf7465114 C14 : add sequence.
correct seq gcc code inclusion
2014-06-12 22:59:22 +02:00
Michel Ferrero
422cabd52e Fix detail in callbacks 2014-06-03 17:07:44 +02:00
Olivier Parcollet
446f817111 wrapper: add release_GIL_and_enable_signal option.
- Add to the wrapper generator (add_method) the release_GIL_and_enable_signal option which :

   - release the GIL
   - save the python signal handler
   - enable the C++ triqs signal handler instead.
   - undo all of this after the code runs, or in a case of exception.
   - used python include, ceval.h, line 72 comments and below.

- reworked the triqs::signal_handler.
  simple C like function, no object (no need).
  start, stop, received, cf header file.

- clean the call_back.cpp : only place using the signal directly
  (qmc uses the callback).
  in particular, remove the old BOOST CHRONO, since
  the std::chrono works fine on platforms we use now.
2014-05-30 21:09:18 +02:00
Olivier Parcollet
e6529b608e Change implementation of random_generator & python wrapper.
- Use a new buffered_function to replace the complicated generator code from ALPS.
- Clean the implementation of the random_generator
- update the documentation
- update to the new python wrapper (could not be done with the previous
  version, because of lack of move constructor).
2014-05-29 22:25:22 +02:00
Olivier Parcollet
4789dccda6 parameters : small details
- an include missing on OS X
- change serialization in the general case where hdf5 can be used,
  (version of hdf5 high enough) to use only one buffer,
  not a buffer per field.
- put back the mpi_param example.
2014-05-21 17:51:40 +02:00
Olivier Parcollet
27af80c04e Serialization boost/h5 and clean parameters
- parameters : clean, add back serialization. Clean whitespace

- serialization : depending on the version of the hdf5 lib,
  uses h5 or boost.

- TODO : test it on a machine with new hdf5.
2014-05-21 14:35:26 +02:00
Olivier Parcollet
78cbbaa52f Fix #74. Correction of previous commit for gcc 4.8.1
- an include was missing after reorganisation.
2014-05-05 18:29:52 +02:00
Olivier Parcollet
8c725f8d5e Work on compilation speed.
- h5/make_h5.... only used in parameters.
- old boost includes before C++11
- remove boost serialization, make macro TRIQS_MAKE_NVP temporarely
- remove boost::is_complex (can be written in 2 lines...)
- move some lib in cpp
2014-05-02 20:49:19 +02:00
Olivier Parcollet
384c05188c exceptions handling : slight improve
- separate the stack trace from the error message for better python
  handling
- separate triqs::excption from triqs::runtime_error
2014-04-23 19:57:56 +02:00
Olivier Parcollet
377a0026ad add c14 less, greater 2014-03-16 00:11:56 +01:00
Olivier Parcollet
1e220d24c7 kronecker function and overload for matsubara_freq
Used in solver codes.
2014-03-02 17:11:48 +01:00
Olivier Parcollet
9911b18363 mc_tools : add access # proposed/accepted. Add debug_stream
- debug_stream : conditional ostream with a lambda condition for debug.
2014-02-28 17:20:55 +01:00
Olivier Parcollet
e1c113b745 Fix g(k,om) for tests
- evaluator
- G(k,tau) is real
- partial_eval for matrix_valued functions
- details : simplifying traits (using decay_t)
2014-02-26 16:24:51 +01:00
Olivier Parcollet
96ef742344 c14, tuples : various fixes.
- Various details (for_each_enumerate impl)
- also put all tuple stuff in tuple_tools.hpp
- add std14 namespace for usage of c++14 helper types
2014-02-18 15:37:57 +01:00
Olivier Parcollet
1c9d6dacfa arrays: h5 read/write for arrays of complex types
- array of complex type (not fundamental) can now be saved/loaded to
  h5
- with a test with array<gf<...>>
2014-02-13 21:46:23 +01:00
Olivier Parcollet
e182762bf2 clef : add apply_on_each_leaf
- apply_on_each_leaf: apply a function object to every leaf of the tree
- add some macros...
2014-02-10 21:04:27 +01:00
Olivier Parcollet
786bd7095e clef: further little corrections
- declaration order in template.
- some eval details
- do not undef the macro TRIQS_CLEF_STD_MATH_FNT_TO_MAKE_LAZY
for reuse in other part of the lib
2014-02-09 21:04:26 +01:00
Olivier Parcollet
3f62825559 c14. add some helper traits to simplify
add_const_t and co....
fix include
2014-02-09 16:11:39 +01:00
Olivier Parcollet
85141350e7 remove warnings in compilation
- triqs & tests now compiles with -Wall on clang (3.2)
Checked on OS X.
Todo : recheck on other compilers.
2014-01-30 22:17:28 +01:00
Olivier Parcollet
b2603dcf3a Fix for clang 1y with gcc lib
- add a workaround for a gcc issue in fisrt_include.
- --> make sure that the first include is :
either a triqs lib
or first_include
2014-01-20 10:50:52 +01:00
Olivier Parcollet
53b05ad899 Fix const in apply_on_tuple 2014-01-06 16:07:47 +01:00
Olivier Parcollet
02b6cedd14 callback: move to std::chrono instead of boost
- and rm boost::function clashing with std:function
(detected by new clang).
2013-12-10 11:52:53 +01:00
Olivier Parcollet
17ab555213 gf: fix matsubara_freq and mesh_pt
- cleaner implementation, solve some bugs...
2013-11-20 15:16:53 +01:00
Olivier Parcollet
d7cf223994 arrays: clean cache, add traits ...
- also add simple c14 helpers ....
2013-11-18 23:41:32 +01:00
Olivier Parcollet
c1fa2c75de utility/mpi: forgot 2 inlines 2013-10-31 14:59:49 +01:00
Olivier Parcollet
9002c1e456 implement array_const_view 2013-10-21 15:12:53 +02:00
Olivier Parcollet
1517cdaaeb clean the TRIQS_COMPILER macros
- from now on, C++11 compilers only.
- no ressources to maintain old stuff.
2013-10-21 15:12:08 +02:00
Olivier Parcollet
39edb2f846 [API change] gf : factories -> constructors
- Make more general constructors for the gf.
  gf( mesh, target_shape_t)
- remove the old make_gf for the basic gf.
- 2 var non generic gf removed.
- clean evaluator
- add tensor_valued
- add a simple vertex test.
- clean specialisation
- Fix bug introduced in 1906dc3
- forgot to resize the gf in new version of operator =
- Fix make_singularity in gf.hpp

- clean resize in operator =

- update h5 read/write for block gf
  - changed a bit the general trait to save *all* the gf.
  - allows a more general specialization, then a correct for blocks

- NOT FINISHED : need to save the block indice for python.
  How to reread ?
  Currently it read the blocks names and reconstitute the mesh from it.
  Is it sufficient ?

- clean block constructors

 - block constructors simplest possible : an int for the number of blocks
 - rest in free factories.
 - fixed the generic constructor from GfType for the regular type :
   only enable iif GfType is ImmutableGreenFunction

- multivar. fix linear index in C, and h5 format

  - linear index now correctly flatten in C mode
    (was in fortran mode), using a simple reverse of the tuple in the folding.
  - fix the h5 read write of the multivar fonctions
   in order to write an array on dimension # variables + dim_target
   i.e. without flattening the indices of the meshes.
   Easier for later data analysis, e.g. in Python.

- merge matrix/tensor_valued. improve factories

  - matrix_valued now = tensor_valued<2>
    (simplifies generic code for h5).
  - factories_one_var -> factories : this is the generic case ...
    only a few specialization, code is simpler.

- clef expression call with rvalue for *this
- generalize matrix_proxy to tensor and clean

 - clean exception catch in tests

  - exception catching catch in need in test
    because the silly OS X does not print anything, just "exception occurred".
    Very convenient for the developer...
  - BUT, one MUST add return 1, or the make test will *pass* !!
  - --> systematically replace the catch by a macro TRIQS_CATCH_AND_ABORT
    which return a non zero error code.
   - exception : curry_and_fourier which does not work at this stage
   (mesh incompatible).

- gf: clean draft of gf 2 times
  - comment the python interface for the moment.
  - rm useless tests
2013-10-21 15:11:44 +02:00
Olivier Parcollet
a4305f8f2a utility : correct a compile macro
- _j notation was not compiled...
2013-10-21 15:11:42 +02:00
Olivier Parcollet
800aea4c5e remove workaround for icc 13.0
- deprecated....
- remove the TRIQS_WORKAROUND_INTEL_COMPILER_BUGS macro
2013-10-17 00:32:09 +02:00
Michel Ferrero
3de5c682f6 Add TRIQS_CATCH_AND_ABORT macro
modified:   triqs/utility/macros.hpp
2013-10-17 00:32:08 +02:00
Olivier Parcollet
6f7deca96a tuple tools : add reverse for a tuple...
- add in std:: the reverse to be able to apply the algorithms on a
  reversed tuple
- overloaded std::get, std::tuple_size for this
- added tests.
2013-09-28 22:54:21 +02:00
Olivier Parcollet
1906dc30a5 Fix expression template for gf & std::vector
- add move semantics in expression template.

for gfs :
- rm descriptor
- Remove data from expr, rewrote assignment
  which now iterates on the mesh, simply.
  RHS models now FunctionOnMesh
- This fix the multiplication bug of gf
- Remove assign_no_resize/assign_with_resize from proxy
2013-09-22 18:17:40 +02:00
Olivier Parcollet
2cca9584b9 mpi: first draft for #12
- a thin layer, using a bit boost::mpi (for the communicator mostly ...)
  along the lines discussed in #12.
- implemented reduce, allreduce, bcast for arrays, simple scalars,
and any custom type that support boost serialization.
- Custom types :  the operations are done recursively on members.
  No change is needed in the class to use this mpi routine, as long as
  serialize function is defined.
- For arrays of basic types (int, double...), a direct call to MPI C API, which works also for views
  (as long as they are contiguous).
- For arrays of more complex types, we revert to boost::mpi.
- Added a simple test.
- Work still in progress :
   - missing a simple scatter/gather for the arrays
   - need more tests & API thinking.
   - dispatch array code to array lib
   - reduce is "sum" only, but do we need more.
2013-09-13 09:20:21 +02:00
Olivier Parcollet
0586c77307 add c14 details in std::c14
- to use already a few c14 convenience details :

-> polymorphic std::plus, e.g.
   boost::mpi::reduce (world, A,C, std::c14::plus<>(),0);
this plus determine the type by itself ...
  -> errors on the type can be very cryptic on the gf.

-> add std::c14::make_unique
(equivalent of make_shared for unique_ptr).
2013-09-11 20:22:38 +02:00
Olivier Parcollet
c06e183ae5 arrays : revised version of map & fold
- also cleaned a bit reinterpretview example
2013-09-11 18:39:25 +02:00
Olivier Parcollet
4bbcbe35ef gcc 4.6: correction
- removing some test & tuple_tool which fail on old 4.6
For Ubuntu 12.04 compat.
2013-09-08 15:17:18 +02:00
Olivier Parcollet
2c542647fd clef : new version using lvalues and moving rvalues
- change : all objects are by default
  stored now by reference, not by copy any more.
  Unless the trait force_copy_in_expr is true.
- rvalue refs are moved into the tree
- simplifies a lot the writing of lazy method, objects.
- added a macro for methods
- tests ok. Further check needed to control absence of copies...
- improved documentation
2013-09-08 15:04:12 +02:00
Olivier Parcollet
1313566669 utility: simplify a bit tuple::apply 2013-09-06 21:23:55 +02:00
Olivier Parcollet
9790fe8bd0 Work on gf
- clean curry.
- start testing.
2013-09-06 16:00:51 +02:00
Olivier Parcollet
f78e6baf9e code cleaning
- TRIQS_MODEL_CONCEPT renamed : clearer for doc
- index_value_type : remove, useless...
2013-08-27 13:43:58 +02:00
Olivier Parcollet
17a741ad9e arrays: rm has_view_type_tag & add_views
- has_view_type_tag mechanism was replaced by a decltype long ago.
Cleaning since it seems to work on all supported compiler now.

- removed add_views : not used any more.
2013-08-27 13:43:57 +02:00
Olivier Parcollet
41bc8d0338 changing non_view_type to regular_type
- cosmetic : for clarity of the code.
2013-08-27 13:43:57 +02:00
Olivier Parcollet
938f3dc425 arrays: workaround a bug in clang 3.3 release ?
- Apparently there is a bug in release 3.3 of clang
(? on kondo cluster ?) that crash the compiler in compiling
a test. Pb not present in clang from svn.
Changed a little bit the libs as a workaround.
2013-08-27 11:37:21 +02:00
Olivier Parcollet
e707cd8754 correction tuple_tools for gcc 4.6 2013-07-30 22:37:41 +02:00
Olivier Parcollet
0172c61892 tuple_tools : add push_back/front, call_on_zip
- changed apply_on_zip3 -> apply_on_zip ...
2013-07-30 09:08:57 +02:00
Olivier Parcollet
0cdfc4f2d3 tuple_tools : add apply_construct
- given a class F and a tuple t,
it returns F(t[0], t[1], ...)
2013-07-30 09:08:57 +02:00