3
0
mirror of https://github.com/triqs/dft_tools synced 2024-10-31 19:23:45 +01:00
Commit Graph

238 Commits

Author SHA1 Message Date
Olivier Parcollet
e1c113b745 Fix g(k,om) for tests
- evaluator
- G(k,tau) is real
- partial_eval for matrix_valued functions
- details : simplifying traits (using decay_t)
2014-02-26 16:24:51 +01:00
Olivier Parcollet
b8d7373177 arrays : fix auto_assign for chains assignment.
A(i_)(om_) << ...
for A an array of gf was not working.
Modified the auto_assign of arrays to handle the case when the object
in the array is itself autoassigned.
Using the model of std::vector adapter for clef, which works.
Also fixed the gf for a little details (gf_impl is usually in the expression tree, not gf).
2014-02-21 21:00:38 +01:00
Hartmut Hafermann
3d98857c13 adding missing map serialization header 2014-02-20 16:43:46 +01:00
Olivier Parcollet
73d81cc55a gf: correct bug in matsubara_freq mesh point
- bool at_end() for a mesh point means AFTER the last point ,
as end in STL. It was not correct ( +1 missing).
- also the at_end was not computed in the mesh product.
- it slightly changes the test_fit_tail --> just changed the output.
--> did this bug affect other functions/codes ?
2014-02-19 21:14:59 +01:00
tayral
8c1f7945e4 Various small fixes in imfreq Gfs.
- documentation of matsubara_freq_mesh
- fixing doc of fit_tail
- fixing right conventions for matsubara_freq_mesh
2014-02-19 11:59:47 +00:00
Olivier Parcollet
2b315fcdea gf : corrections
- correct previous commit (for scalar gf, the new check was not compiling)
- correct windowing of linear mesh (left point corrected as right point for rounding error
2014-02-18 19:25:29 +01:00
Olivier Parcollet
b76a61680c gf make_gf_from_g_and_tail : add security
- if shape (g) != shape(t) -> exception
2014-02-18 17:15:59 +01:00
tayral
708c47305c Extending fit_tail for scalar_valued (+ test)
-> extension by using reinterpret_scalar_valued_as_matrix_valued
2014-02-18 16:16:14 +01:00
tayral
da7e7ec971 Fixed fit_tail for pos. and neg. matsub + bosonic
-> code was previously assuming mesh with only positive, fermionic matsubara freqs
-> changed wn_min to n_min (was misleading, since it was an index, not a frequency) / same for <-> max
-> changed doc accordingly
2014-02-18 16:16:14 +01:00
tayral
82a6d21939 Fixed computation of density for full matsub mesh
-> Previously, calculation was implicitly assuming a mesh with only positive matsubara frequencies.
-> Added corresponding test
-> Also added test of density calculation with or without correct tail.
2014-02-18 16:16:14 +01:00
Olivier Parcollet
6e87bee850 lattice: clean old classes, add bz_mesh, gf on bz 2014-02-18 15:53:38 +01:00
Olivier Parcollet
e82d95d1a8 gf: add C++14 impl of meshes products
-  add c14 include
- the C++14 is lot more readable (due to generic lambda).
- for mesh/product.hpp -> now 2 versions (C++14 and C++11 for temporary
  backward compatibility).
2014-02-18 15:37:57 +01:00
Olivier Parcollet
96ef742344 c14, tuples : various fixes.
- Various details (for_each_enumerate impl)
- also put all tuple stuff in tuple_tools.hpp
- add std14 namespace for usage of c++14 helper types
2014-02-18 15:37:57 +01:00
Olivier Parcollet
a503ddae26 clef: correction of macro
- a strange issue, why was it not working ?
- anyway, the separation is useless (was a try).
2014-02-18 15:37:57 +01:00
Olivier Parcollet
76e39c826f arrays: add make_unit_matrix and norm2, norm2_sqr 2014-02-18 15:36:24 +01:00
Olivier Parcollet
1c9d6dacfa arrays: h5 read/write for arrays of complex types
- array of complex type (not fundamental) can now be saved/loaded to
  h5
- with a test with array<gf<...>>
2014-02-13 21:46:23 +01:00
Olivier Parcollet
7aedaef945 arrays : fix matrix = scalar for complex types
Pb :
M() = rhs; // rhs of type RHS
Currenlty does :
M(i,j) = (i==j ? rhs : RHS{})
Changed to
M(i,j) = (i==j ? rhs : RHS{0*rhs})

If RHS is a double, int ... Same result.
If RHS is a matrix, gf, currently the offdiag elements
are default constructed (i.e. of 0 size !).
Which can break operations later (matrix<matrix<double>>)
After change : all elements have the same size !
2014-02-12 21:50:58 +01:00
tayral
87dc9aeaa5 Add statistic tools
- binning, jackknife, autocorrelation, observable.
- DRAFT only : in development, debug. Doc to be written.
2014-02-12 09:41:07 +01:00
Olivier Parcollet
e182762bf2 clef : add apply_on_each_leaf
- apply_on_each_leaf: apply a function object to every leaf of the tree
- add some macros...
2014-02-10 21:04:27 +01:00
Olivier Parcollet
786bd7095e clef: further little corrections
- declaration order in template.
- some eval details
- do not undef the macro TRIQS_CLEF_STD_MATH_FNT_TO_MAKE_LAZY
for reuse in other part of the lib
2014-02-09 21:04:26 +01:00
Olivier Parcollet
7e1f2eb34b clef: cleaning
- use alias
- rename a few things, simplify
- some clang format
- add eval to ref wrapper
- correct evaluator general (return const &, no copy)
- correct declaration order of struct and operator OP
2014-02-09 16:11:39 +01:00
Olivier Parcollet
3f62825559 c14. add some helper traits to simplify
add_const_t and co....
fix include
2014-02-09 16:11:39 +01:00
Olivier Parcollet
dd6b996e5d arrays: to_python now raise exception when array is empty
- otherwise it was simply crashing .
- now raise a C++ exception
- adapted cython wrapper to catch it as a python exception
2014-02-04 15:04:40 +01:00
Hartmut Hafermann
65ed3a8dc2 gf: new tail fitting 2014-02-03 22:22:21 +01:00
Hartmut Hafermann
31ae772892 arrays: add gelss 2014-02-03 22:16:58 +01:00
Olivier Parcollet
85141350e7 remove warnings in compilation
- triqs & tests now compiles with -Wall on clang (3.2)
Checked on OS X.
Todo : recheck on other compilers.
2014-01-30 22:17:28 +01:00
Olivier Parcollet
9f0915acb6 gfs, matsubara: correct unary - for matsubara_freq
- The unary - of matsubara_freq was not correct ...
missing () around the ==
2014-01-30 21:29:53 +01:00
Olivier Parcollet
eda6eb90a2 arrays: correction of value_type of matrix_expr
- forgot to correct the value_type of matrix_expr, and vector_expr
as was done long ago for arrays...
- also added cases for arrays until dim 10
- TODO : replace this trait in arrays with a tuple tools for any dim..
  not urgent.
2014-01-30 20:28:30 +01:00
Olivier Parcollet
91978da6db gfs: mesh product, rename shape method...
- just a renaming for readibility.
2014-01-30 20:28:30 +01:00
Olivier Parcollet
ff3de6c5e7 mc_tools: simplify measure_aux
- for pieces that need to be precomputed for several
measures.
- put them under shared_ptr, and register then with add_measure_aux.
- they must be callable, as void ().
- TODO : add this in the doc when tested
2014-01-30 20:28:30 +01:00
tayral
1811d53179 Added density for scalar_valued gf (and test thereof) 2014-01-20 17:55:07 +01:00
tayral
2d1dec4c3d Fixed antiperiodicity property of imtime
- the condition p%2 ==1 was wrong if p<0 (never true!)
- added corresponding test (gf_notail)

Conflicts:
	triqs/gfs/imtime.hpp

Fixed by O.P. : already fixed in Laura's pull request ...
2014-01-20 17:54:33 +01:00
Laura Messio
359deae18d correction of a bug in imtime (evaluator_fnt_on_mesh) + corresponding test added 2014-01-20 17:49:47 +01:00
Laura Messio
04cf39a361 deprecated gfs files removed 2014-01-20 17:49:47 +01:00
Olivier Parcollet
b2603dcf3a Fix for clang 1y with gcc lib
- add a workaround for a gcc issue in fisrt_include.
- --> make sure that the first include is :
either a triqs lib
or first_include
2014-01-20 10:50:52 +01:00
Olivier Parcollet
0f85b08693 add trace for ImmutableMatrix 2014-01-12 20:46:10 +01:00
Olivier Parcollet
6820f4865a gf : target_shape_t. change size_t to int
- to avoid narrowing pbs.
- otherwise {n,n}, with n int does not work, which is crazy.
2014-01-10 21:47:33 +01:00
Olivier Parcollet
9474937470 shared_ptr<void> can not be constructed directly in c++14
- Fix for compilation on clang 3.4 in c++1y mode.
2014-01-07 14:33:57 +01:00
Olivier Parcollet
b644b38a6a gf: imfreq. general case, fix python interface
- Fix constructor, now taking n_points like the positive_only case
- Fix python, h5read, for general case (i.e. all frequencies).
2014-01-07 14:30:40 +01:00
Olivier Parcollet
2200e2680f gf: imfreq: fix out of bound product gf imfreq
- gf<cartesian_product<imfreq,imfreq>> was not correct
  when out bounds. Fixed evaluator.
- tensor_proxy : fix the trait for algebra which was incorrect.
- TODO: clean code (repetition, put in mesh some windowing).
2014-01-06 19:16:25 +01:00
tayral
1b3a66af24 Fixed bug out of domain for mesh with positive and negative matsubara frequencies 2014-01-06 16:07:47 +01:00
Olivier Parcollet
53b05ad899 Fix const in apply_on_tuple 2014-01-06 16:07:47 +01:00
Olivier Parcollet
1ecec0b933 gfs: Fix bug in imfreq with <0 freq.
- there was a confusion in gf imfreq, in the new case
where freq can be <0 (non real gf, or for product gf).
- index: is the matsubara n, as in the struct matsubara_freq
  index can be >0 or <0
- linear_index : is the shift from the 0. It is always >0.
  Fixed function to compute it.

- Also changed the construction of mesh_point in the generic iterator.
  Before, was constructed with a mesh point of index 0
  Now, added a new constructor on mesh_point_t, just taking the mesh
  which construct the *first* mesh_point.
  Fixed linear, discrete, product accordingly.
  Added to the documentation of the concepts of gf.
2014-01-05 20:10:33 +01:00
tayral
b8e29192da gfs: Fixed bug in index_to_point. 2014-01-05 16:58:54 +01:00
Olivier Parcollet
bdac3e159c work on doc for gf, and details.
- little details : code cleaning, clang formatting,  along
with documentation writing for c++ gf.
- separated the mesh in small class for better doc.
- work on documentation : reorganize specialisation, ...
2013-12-30 22:32:16 +01:00
Olivier Parcollet
59b969dbd3 arrays: fix mapped_function (conj overload)
- conj overload should return complex, as in standard.
- changed the test output for mapped_function.
- fixed make_matrix_view and example in doc.
2013-12-30 22:32:15 +01:00
Olivier Parcollet
74469ad5b0 gf: generalize the constructor of gf_mesh from domain
- to add "positive_only" flags, in the case
we need both negative and positive frequencies in matsubara.
2013-12-27 15:18:46 +01:00
Olivier Parcollet
c0993d9db8 mc_tools : add debug print under macro
When TRIQS_MCTOOLS_DEBUG is defined,
the qmc now reports some basic debug info
(when is a move accepted, rejected, ...).
2013-12-23 23:21:30 +01:00
Olivier Parcollet
5f7e0989a3 gfs. Rm code introduced only for Krylov QMC
- This function was redondant : qmc code cleaned.
- using make_clone in gfs namespace for ADL usage.
2013-12-23 23:21:30 +01:00
Olivier Parcollet
8cc5012347 Fix #42. Conj overload issue
std::conj returns a complex according to std.
On gcc, we need to define it (bug?) but on clang libc++
it is an error.

-> one test is still failing : to be decided later
2013-12-21 20:07:52 +01:00
Laura Messio
477f5f4ea1 bug in a det_manip constructor (from vectors for x and y values) corrected 2013-12-18 11:21:39 +01:00
Olivier Parcollet
ce221dfc1c gf: add negative matsubara freqs
- add possibility of having negative matsubara freqs
in the matsubara mesh.

- TODO :
   finish imtime complex
   adapt fourier in this case
   test
2013-12-17 15:09:34 +01:00
Olivier Parcollet
02b6cedd14 callback: move to std::chrono instead of boost
- and rm boost::function clashing with std:function
(detected by new clang).
2013-12-10 11:52:53 +01:00
Olivier Parcollet
fb6b47cacf cmake. group c++11 flags
Now that boost compilation is gone, no need
of that mess.
Put same compilation flags for all code.
2013-12-04 22:24:14 +01:00
Olivier Parcollet
f6e006c2e0 gf. Correct evaluator imfreq
- overload for matsubara_freq, not the point.
2013-12-04 12:11:48 +01:00
Olivier Parcollet
17ab555213 gf: fix matsubara_freq and mesh_pt
- cleaner implementation, solve some bugs...
2013-11-20 15:16:53 +01:00
Olivier Parcollet
9ce291d640 gf: update gf imfreq for g( om - nu) case
DRAFT : to be tested further...

- update gf<imfreq>
- write a specific mesh for matsubara frequencies
- now the cast series is :
  mesh_pt --> matsubara_freq --> complex<double>
- matsubara_freq is just the matsubara frequency
- arithmetic of the mesh_pt casted to matsubara_freq
- arithmetic of matsubara_freq is casted to complex, except + and -,
  which are kept as matsubara_freq.
- evaluator now accept : int, mesh_pt, and matsubara_freq
  for matsubara_freq : for negative omega, use conjugation
  for omega outside windows, evaluate the tail on omega.
- as a result : g( om - nu) where om, nu are 2 meshes points,
  is the extrapolation outside the grid if necessary.
- updated tests
- added evaluation for tail.
2013-11-18 23:41:32 +01:00
Olivier Parcollet
184274c893 gf : fix bug in mesh_pt_generator
- in the default constructor, do not call the pointer
that may be null.
- appeared only in python (unused in c++), for new matsubara...
2013-11-18 23:41:32 +01:00
Olivier Parcollet
e703b1e2b7 port to clang 3.4
- little narrowing details
2013-11-18 23:41:32 +01:00
Olivier Parcollet
d7cf223994 arrays: clean cache, add traits ...
- also add simple c14 helpers ....
2013-11-18 23:41:32 +01:00
Olivier Parcollet
9cdc139214 arrays: add conj function for arrays/matrix and tests
- map conj (and extend it for integers).
2013-11-18 23:41:32 +01:00
Olivier Parcollet
fa6f991473 arrays: clean h5 code
- c++11 cleaning, more doc.
- clean the array_stack and its doc.
2013-11-18 23:41:32 +01:00
Olivier Parcollet
899210ff53 arrays: fix bug in ellipsis when it is of size 0
- a(1,ellipsis()) for a an array<T,1> e.g.,
was not compiling.
- also added const_iterator for range to allow simple code :
  for (auto i : range {3,6}) ....-> i = 3,4,5 as in python
2013-11-18 23:41:32 +01:00
Olivier Parcollet
c151e63de2 arrays : rm old array_proxy
- useless old draft
2013-11-18 23:41:32 +01:00
Olivier Parcollet
172ecaa29e add header helper files 2013-11-18 23:41:32 +01:00
Olivier Parcollet
f45dedb94e gf : improve error message 2013-11-18 23:41:32 +01:00
Olivier Parcollet
abc743c0a1 gf deprecated : correction 2013-11-05 11:39:50 +01:00
Olivier Parcollet
c1fa2c75de utility/mpi: forgot 2 inlines 2013-10-31 14:59:49 +01:00
Olivier Parcollet
8be0c208c2 gf.Fourier scalar_valued. Fix tail size
- tail is 0, but must be of dimension (1,1)
2013-10-31 14:54:43 +01:00
tayral
4c1c14b989 gf:fourier Add missing function in no_tail case
- one only the Matsubara case.
- TODO: the real omega case : decide and implement.
- impl: remove superfluous dispatch in x_impl
2013-10-31 14:41:48 +01:00
Olivier Parcollet
6326c2b4eb gf/clef. Bug fix, and added scalar->matrix reinterpret for blocks
- clef : fix a little bug in storage when evaluating
  (was using the wrong trait to deduce storage type).
- gf : block :
     - added reinterpret_scalar_valued_gf_as_matrix_valued
       for block function
     - cleaned make_block_gf_view_from_vector
     - added make_block_gf_view_from_vectormake_block_gf_view_from_vector_of_cython_proxy
       and changed the cython accordingly because it requires a slightly different syntax.
     - updated tests
- gf : cleaned some template.
2013-10-31 14:41:48 +01:00
Olivier Parcollet
2eca9d8659 clef : forgot a forward in unary operator eval 2013-10-30 13:19:58 +01:00
Olivier Parcollet
0f324df3ef gf: Fix for make_fourier in scalar_valued mode 2013-10-30 13:19:33 +01:00
Olivier Parcollet
928ef222cc [API Change] parameters: required, optional
- now chain the required

- pdef.optional( "B", short(0), " short ")
  .optional( "C", 1u, " unsigned short ")
  .optional( "D", int(2), " int ")
  .optional( "E", 3u, " unsigned int ")
  .optional( "F", long(4), " long ")
2013-10-26 14:34:10 +02:00
Olivier Parcollet
12cb2db2ba gf: fix auto_assign for chained calls.
- g[k_][om_] << expression was not working.
 now  implemented like for std::vector adapter.
2013-10-26 13:49:24 +02:00
Olivier Parcollet
579368f24b gf. Clean Fourier
- lazy_fourier and co --> fourier
- ex fourier --> make_gf_from_fourier to make a new gf
- = fourier (g) works only iif lhs is a view, like scalar.
- updated python (commented fourier method).
2013-10-23 18:46:55 +02:00
Olivier Parcollet
1d5ea99d4f gf block : clean
- clean some constructor and clang format
2013-10-23 18:08:12 +02:00
Olivier Parcollet
603e397e16 gf. Clean code, rereading for doc
- no major change. Code cleaning + clang-format.
2013-10-22 21:29:27 +02:00
Olivier Parcollet
2fc4f1cd09 gf: add rebind view/const + delete swap 2013-10-22 21:29:27 +02:00
Olivier Parcollet
de0e41ed15 gf: finish block iterator 2013-10-22 21:29:27 +02:00
Olivier Parcollet
1d929c1a91 arrays: add rebind const_view from view
- also add some static assert to forbid += and co on const_view
2013-10-22 21:29:27 +02:00
Olivier Parcollet
dcb1386630 arrays const_matrix_tensor_proxy delete = 2013-10-21 21:53:49 +02:00
Olivier Parcollet
e48a451550 gfs: cleaning code.
Using construction delegation to simplify code.
2013-10-21 21:53:49 +02:00
Olivier Parcollet
cbf2142af6 gf curry: clean call for a single index
- if the index is not a tuple, make it a tuple...
- better API.
2013-10-21 17:05:15 +02:00
Olivier Parcollet
e5648d2bfd gf : various fixes
- blocks : including the iterator
  --> there is still an issue, with the use of & intead of a view
- details after rereading...
2013-10-21 15:12:53 +02:00
Olivier Parcollet
d6cb6d2945 gf/imfreq : remove the little () workaround
- was a bug workaround. Should be ok, but
 reason of previous fix unclear. Suspicious...
- necessary to remove this :
  - it is useless normally.
  - it prevent the evaluator to work for scalar valued gf
2013-10-21 15:12:53 +02:00
Olivier Parcollet
9edda8724d implement gf_const_view 2013-10-21 15:12:53 +02:00
Olivier Parcollet
445f7d42e1 arrays: clean dead code 2013-10-21 15:12:53 +02:00
Olivier Parcollet
9002c1e456 implement array_const_view 2013-10-21 15:12:53 +02:00
Olivier Parcollet
1517cdaaeb clean the TRIQS_COMPILER macros
- from now on, C++11 compilers only.
- no ressources to maintain old stuff.
2013-10-21 15:12:08 +02:00
Laura Messio
7693077b79 gf: Fix out of bound in linear mesh in gf eval.
- When reaching the last point of the grid,
move one step back and set w =1.
- fix the gf_2times but and related issues.
2013-10-21 15:11:44 +02:00
Olivier Parcollet
39edb2f846 [API change] gf : factories -> constructors
- Make more general constructors for the gf.
  gf( mesh, target_shape_t)
- remove the old make_gf for the basic gf.
- 2 var non generic gf removed.
- clean evaluator
- add tensor_valued
- add a simple vertex test.
- clean specialisation
- Fix bug introduced in 1906dc3
- forgot to resize the gf in new version of operator =
- Fix make_singularity in gf.hpp

- clean resize in operator =

- update h5 read/write for block gf
  - changed a bit the general trait to save *all* the gf.
  - allows a more general specialization, then a correct for blocks

- NOT FINISHED : need to save the block indice for python.
  How to reread ?
  Currently it read the blocks names and reconstitute the mesh from it.
  Is it sufficient ?

- clean block constructors

 - block constructors simplest possible : an int for the number of blocks
 - rest in free factories.
 - fixed the generic constructor from GfType for the regular type :
   only enable iif GfType is ImmutableGreenFunction

- multivar. fix linear index in C, and h5 format

  - linear index now correctly flatten in C mode
    (was in fortran mode), using a simple reverse of the tuple in the folding.
  - fix the h5 read write of the multivar fonctions
   in order to write an array on dimension # variables + dim_target
   i.e. without flattening the indices of the meshes.
   Easier for later data analysis, e.g. in Python.

- merge matrix/tensor_valued. improve factories

  - matrix_valued now = tensor_valued<2>
    (simplifies generic code for h5).
  - factories_one_var -> factories : this is the generic case ...
    only a few specialization, code is simpler.

- clef expression call with rvalue for *this
- generalize matrix_proxy to tensor and clean

 - clean exception catch in tests

  - exception catching catch in need in test
    because the silly OS X does not print anything, just "exception occurred".
    Very convenient for the developer...
  - BUT, one MUST add return 1, or the make test will *pass* !!
  - --> systematically replace the catch by a macro TRIQS_CATCH_AND_ABORT
    which return a non zero error code.
   - exception : curry_and_fourier which does not work at this stage
   (mesh incompatible).

- gf: clean draft of gf 2 times
  - comment the python interface for the moment.
  - rm useless tests
2013-10-21 15:11:44 +02:00
Olivier Parcollet
a4305f8f2a utility : correct a compile macro
- _j notation was not compiled...
2013-10-21 15:11:42 +02:00
Olivier Parcollet
b9451e7018 clef : code cleaning
- remove a useless opertor(...)
2013-10-18 21:54:38 +02:00
Olivier Parcollet
a5938a8d9e Fix arithmetic of mesh_points in gf
- the arithmetics of the gf mesh_points :
the forwarding of the second argument was missing,
leading to subtle bugs e.g. in  (in matrix case) :

  deltaw(iom_) << iom_ * gw.singularity()(-1) + gw.singularity()(0) - gw(iom_);

because the partial evaluation of the expression introduced a dangling const matrix_view &
instead of moving the temporary matrix_view into the final matrix expression template.
2013-10-18 21:52:57 +02:00
Olivier Parcollet
7419b1a68e Fix #20 2013-10-18 13:55:04 +02:00
Olivier Parcollet
588dd6e50a arrays: clean inverse
- does not use view
- determinant not lazy any more
2013-10-17 00:32:09 +02:00
Olivier Parcollet
800aea4c5e remove workaround for icc 13.0
- deprecated....
- remove the TRIQS_WORKAROUND_INTEL_COMPILER_BUGS macro
2013-10-17 00:32:09 +02:00
Olivier Parcollet
4d0bb56790 arrays. Clean expression templates
- clean array, matrix, vector expression template
  they take const & of objects, or move && objects
  no more views. -> C++11 modernisation
- Fix a bug in array resize : it was resetting the indexmap
  to C memory layout e.g. for a fortran array
- Fix a bug in read h5 array when not in C order
  (forgot an else, the array was read twice).
2013-10-17 00:32:09 +02:00
Olivier Parcollet
59288e597f clef. Clean evaluator when producing temporaries...
- When evaluation produces temporaries in intermediate
steps, they were capture by ref, not properly forwarded.
This results in bugs in more complex cases,
like evaluation of objects returning new arrays expression template.
(preparation for next commit).
2013-10-17 00:32:08 +02:00