Work on doc

doc/reference/c++/arrays/Interop_Python.rst

@@ -5,6 +5,11 @@ Interface with Python numpy arrays
 
 The array, matrix, vector and their views are fully interoperable with the numpy array objects in python.
 
+.. warning::
+
+   Doc need to be largely improved here...
+
+
 From Python to C++
 --------------------------
 

doc/reference/c++/arrays/blas_lapack.rst

@@ -3,6 +3,10 @@
 Linear algebra 
 ===============================================
 
+.. warning::
+
+   Doc still largely to be written and updated....
+
 Several standard linear algebra operations are provided for the matrix and vector.
 Note however that matrix and vector are not the main purpose of this library, 
 hence the linear algebra support is less extended than other purely matrix library, 
@@ -21,8 +25,8 @@ The * operator map the matrix x matrix and matrix x vector product.
 
 Example : matrix * matrix and * vector ...
 
-.. compileblock::
+..  
-
+   compileblock::
    #include <triqs/arrays.hpp>
    using triqs::arrays::matrix; using triqs::clef::placeholder;
    int main() {  
@@ -30,32 +34,13 @@ Example : matrix * matrix and * vector ...
     placeholder<0> i_; placeholder<1> j_;
     matrix<double> A (2,2), B(2,2), C; 
     A(i_,j_) <<  i_ + j_ ; B(i_,j_) <<  2*i_ + j_ ;
-
-    // Making the product
     C= A*B;
-    // Note that the * returns a lazy object 
+    std::cout<< " C = " << C<< std::endl;   
-    // that has ImmutableArray concept, and defines a specialized version assignment.
-    // compiler rewrites this as something like matmul_with_lapack (A,B,C);
-    // There are no temporary here.
-
-   std::cout<< " C = " << C<< std::endl;   
-   std::cout<< " A*B = " << A*B << std::endl; // NB A*B does not return a matrix, but 
-   // a lazy expression which is not evaluated until needed. 
    }
  
 For types that lapack do not use, a generic version of the matrix product is provided.
 (same syntax, the dispatch is made at compile time depending of the type of the matrices).
 
-NB : 
-
-* The **generic** version of the product will be used if
-both matrices do not have the same type.
-**Is this reasonnable ??**.
-
-* Is the matrix's slowest index is not contiguous, blas/lapack can not be called directly.
-  So a temporary copy will be made to reorganize the matrix before calling blas/lapack.
-  Code is therefore (normally !) always correct, but this can produce a serious performance hit.
-
 
 Matrix inversion
 ----------------------

doc/reference/c++/arrays/contents.rst

@@ -1,5 +1,10 @@
 Multidimensional arrays
 *******************************************
+.. warning::
+
+   This library is of stable quality, except when mentionned otherwise (for some recent features).
+   
+   Documentation is still work in progress.
    
 .. highlight:: c
 

doc/reference/c++/clef/contents.rst

@@ -7,6 +7,8 @@ Clef expressions library
 
     This library is still a prototype, of alpha quality. 
      
+    Documentation is not fully up to date : work in progress. 
+
 The little CLEF library (Compile time Lazy Expression and Function)
 is a simple lambda library for C++11, to store and code formal expressions
 using placeholders. 

doc/reference/c++/contents.rst

@@ -2,10 +2,14 @@
 C++
 =============
 
+.. warning::
+
+   This documentation is work in progress.
+
 .. toctree::
    :maxdepth: 1
 
-   learn/intro
+   using_the_lib/contents
    arrays/contents
    gf/contents
    clef/contents

doc/reference/c++/det_manip/contents.rst

@@ -3,6 +3,10 @@
 Manipulations of determinants
 =============================
 
+.. warning::
+
+   This library is stable, but documentation is still a bit spartan ...
+
 The purpose of this little class is to regroup standard block manipulations on determinant, used in several 
 QMC.
 

doc/reference/c++/gf/contents.rst

@@ -6,6 +6,9 @@ Green functions
 The TRIQS library provides a generic container `gf` and its view `gf_view`, to store and manipulate
 various Green functions.
 
+.. warning::
+
+   This library is still alpha. API may evolve. Documentation still in progress.
 
 .. toctree::
    :maxdepth: 2

doc/reference/c++/parameters/parameters.rst

@@ -1,6 +1,13 @@
-parameters
+Parameters
 ===============
 
+.. warning::
+
+   Library of beta quality.
+
+   Documentation : just intro/tutorial, reference doc in progress.
+
+
 Introduction
 --------------
 

doc/reference/c++/using_the_lib/triqs_library.rst

@@ -1,5 +1,4 @@
-
+Building
-TRIQS as a library
 ==================
 
 .. highlight:: c
@@ -45,17 +44,12 @@ start by writing some sources:
 
 OK, our project will be just one :file:`main.cpp` file, e.g.::
 
-  #include <triqs/arrays/array.hpp>
+  #include <triqs/arrays.hpp>
-
+  using namespace triqs::arrays;
-  namespace tqa = triqs::arrays;
-
   int main(){
-
+    array<double,1> A {1,2,3}, B{10,20,30}, C;
-    tqa::array<double,1> A(10), B(10);
+    C = A+B;
-    A()=2; B()=3;
-    tqa::array<double,1> C = A+B;
     std::cout << "C = "<< C << std::endl;
-
   }
 
 As you can see, the code includes headers from TRIQS. Along with
@@ -67,26 +61,30 @@ variables, especially the include directories related to the TRIQS headers and
 the location of the TRIQS libraries. Here is what your simple
 :file:`CMakeLists.txt` can be:
 
-.. code-block :: bash
+.. code-block :: cmake
 
+  # Append triqs installed files to the cmake load path
+  list(APPEND CMAKE_MODULE_PATH ${TRIQS_PATH}/share/triqs/cmake)
+
+  # start configuration 
   cmake_minimum_required(VERSION 2.8)
-
   project(myproj CXX)
-
-  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++0x")
-
   set(CMAKE_BUILD_TYPE Release)
 
-  SET(CMAKE_INSTALL_RPATH "${TRIQS_PATH}/lib")
+  # We use shared libraries
-  SET(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
+  # option(BUILD_SHARED_LIBS "Build shared libraries" ON)
-  SET(CMAKE_BUILD_WITH_INSTALL_RPATH TRUE)
 
-  include(${TRIQS_PATH}/share/triqs/cmake/TRIQSConfig.cmake)
+  # Load TRIQS, including all predefined variables from TRIQS installation
+  find_package(TRIQS REQUIRED)
 
+  # We want to be installed in the TRIQS tree
+  set(CMAKE_INSTALL_PREFIX ${TRIQS_PATH})
+
+  # Build the code, adding triqs in include and link flags
   add_executable(example main.cpp)
+  include_directories(${TRIQS_INCLUDE_ALL})
+  target_link_libraries(example ${TRIQS_LIBRARY_ALL})
 
-  include_directories(${TRIQS_INCLUDE} ${EXTRA_INCLUDE} ${CBLAS_INCLUDE} ${FFTW_INCLUDE})
-  target_link_libraries(example ${TRIQS_LIBRARY} ${EXTRA_LIBRARY})
 
 We're all set! Everything is ready to compile our project. If we want to build
 everything in :file:`/home/project/build`, we do as follows: